Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq168888 188 4e-43
>seq168888
Length=4095
Score = 188 bits (208), Expect = 4e-43
Identities = 287/406 (71%), Gaps = 2/406 (0%)
Strand=Plus/Minus
Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965
||| || |||||| |||||| | | |||||| | ||| || ||||| | ||||||||
Sbjct 1996 CCAGTCTTCATTTTTTTCAACTCTTTTCATAAAAAGATCCGGTATCCATAAAGCATAAAA 1937
Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCC-GTGATTCTTTTTTAGATCTAAGAAATCAA 26024
|| |||| |||| | ||||||||| || ||| |||||||| || || | || ||||
Sbjct 1936 CAACTCTCGAGCTCGTACTTCTTCTTTGCCAGTG-TTCTTTTTGAGGTCGAGAAATTCAA 1878
Query 26025 AAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCAC 26084
|||| |||| ||||| || |||||||| | |||||| || | ||| |||||
Sbjct 1877 AAATGTCTGCATGCCAAGGCTCTAAATACACTGCAAAAGCTCCGGGGCGTTTATTTCCAC 1818
Query 26085 CTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTG 26144
|||||||||| |||||||| || | ||| |||| | | |||||| || | ||| | |
Sbjct 1817 CTTGATCTACATATCTTGCTGTGTTGTTGTAAACCCTAAGCATTGGCACGAGTCCGTTAG 1758
Query 26145 AAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATAC 26204
| | || ||||||| || | |||||| | | ||| ||| |||| | || | |
Sbjct 1757 ATACACCATTTGTGCCTGCGATATATGATCCTTTAGCTCTGATACAGTGAACGTGGACTC 1698
Query 26205 CGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTT 26264
||||||||||||| |||| || ||| ||||| | | | ||||| | || ||||
Sbjct 1697 CGATTCCACCAGCAGATTTAGATATAAGCGCACATTGTTTTAAAGTATCATATATACCTT 1638
Query 26265 TTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTG 26310
|| || ||| ||||||| ||| | ||||||||| || |||||
Sbjct 1637 CAATACTGTCATCTTTCATAGCTACAAGAAAACAAGATGACAATTG 1592
Score = 120 bits (132), Expect = 2e-22
Identities = 123/161 (76%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 25016 AATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCA 25075
|| || |||||||||||||||||| ||| ||||| ||||| |||||||| |||||
Sbjct 2853 AACTCGCCAGACAAAACTCTTCTTTGGTATATATTTGATGTGAAAGGTTCAAATGATTCA 2794
Query 25076 TTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTT 25135
|| || || | ||||||| || |||||||||||||| |||| ||||| ||||||
Sbjct 2793 TTGTTACCAAGAATTTGAGCCGTGGATGCTGTTGGCATAGGAGCTAATAATAAAGAATTT 2734
Query 25136 CTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCA 25176
|||||||||| ||| ||| || |||||| ||||||
Sbjct 2733 CTCAAACCATGCTTAGAAATTCTTTCTTTTAAAGCATCCCA 2693
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 252278076237725
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |