Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq168888 188 4e-43 >seq168888 Length=4095 Score = 188 bits (208), Expect = 4e-43 Identities = 287/406 (71%), Gaps = 2/406 (0%) Strand=Plus/Minus Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965 ||| || |||||| |||||| | | |||||| | ||| || ||||| | |||||||| Sbjct 1996 CCAGTCTTCATTTTTTTCAACTCTTTTCATAAAAAGATCCGGTATCCATAAAGCATAAAA 1937 Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCC-GTGATTCTTTTTTAGATCTAAGAAATCAA 26024 || |||| |||| | ||||||||| || ||| |||||||| || || | || |||| Sbjct 1936 CAACTCTCGAGCTCGTACTTCTTCTTTGCCAGTG-TTCTTTTTGAGGTCGAGAAATTCAA 1878 Query 26025 AAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCAC 26084 |||| |||| ||||| || |||||||| | |||||| || | ||| ||||| Sbjct 1877 AAATGTCTGCATGCCAAGGCTCTAAATACACTGCAAAAGCTCCGGGGCGTTTATTTCCAC 1818 Query 26085 CTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTG 26144 |||||||||| |||||||| || | ||| |||| | | |||||| || | ||| | | Sbjct 1817 CTTGATCTACATATCTTGCTGTGTTGTTGTAAACCCTAAGCATTGGCACGAGTCCGTTAG 1758 Query 26145 AAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATAC 26204 | | || ||||||| || | |||||| | | ||| ||| |||| | || | | Sbjct 1757 ATACACCATTTGTGCCTGCGATATATGATCCTTTAGCTCTGATACAGTGAACGTGGACTC 1698 Query 26205 CGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTT 26264 ||||||||||||| |||| || ||| ||||| | | | ||||| | || |||| Sbjct 1697 CGATTCCACCAGCAGATTTAGATATAAGCGCACATTGTTTTAAAGTATCATATATACCTT 1638 Query 26265 TTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTG 26310 || || ||| ||||||| ||| | ||||||||| || ||||| Sbjct 1637 CAATACTGTCATCTTTCATAGCTACAAGAAAACAAGATGACAATTG 1592 Score = 120 bits (132), Expect = 2e-22 Identities = 123/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 25016 AATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCA 25075 || || |||||||||||||||||| ||| ||||| ||||| |||||||| ||||| Sbjct 2853 AACTCGCCAGACAAAACTCTTCTTTGGTATATATTTGATGTGAAAGGTTCAAATGATTCA 2794 Query 25076 TTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTT 25135 || || || | ||||||| || |||||||||||||| |||| ||||| |||||| Sbjct 2793 TTGTTACCAAGAATTTGAGCCGTGGATGCTGTTGGCATAGGAGCTAATAATAAAGAATTT 2734 Query 25136 CTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCA 25176 |||||||||| ||| ||| || |||||| |||||| Sbjct 2733 CTCAAACCATGCTTAGAAATTCTTTCTTTTAAAGCATCCCA 2693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252278076237725