Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq67196 149 1e-30
seq15021 138 2e-27
seq5032 116 7e-21
seq174000 111 3e-19
seq221927 89.7 9e-13
seq199221 89.7 9e-13
>seq67196
Length=1848
Score = 149 bits (164), Expect = 1e-30
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||| | | || ||||| |||||||| |||| ||||| |||||| |||||
Sbjct 9 ATACCACCACGGAGACGCAGTACAAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCA 68
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|||| || | ||| || | |||||| || || ||||| | |||||| || || ||
Sbjct 69 GATAGGGTGCGCCCATCTTCAAGTTGTTTGCCAGCGAAAATCAGTCTCTGCTGGTCTGGG 128
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || || || |||||||| || |||| ||||| ||| |||||| || || | |||
Sbjct 129 GGGATCCCCTCCTTATCTTGAATCTTGGCTTTTACATTCTCAATAGTGTCTGATGGCTCT 188
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| |||||||| ||||||||||| || | ||||| ||||| || |||||
Sbjct 189 ACCTCTAGAGTAATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 238
Score = 131 bits (144), Expect = 3e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||| | | || | |||||||| | || | ||||| |||||||||||
Sbjct 237 ATACCACCACGGAGACGCAAAACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCA 296
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|||| || | ||| || | |||||||| ||||| || | | |||||||| ||
Sbjct 297 GATAGGGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGC 356
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| ||||| || || |||| ||| | |||| ||| || || || | ||||
Sbjct 357 GGAATACCTTCCTTATCCTGAATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCA 416
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||||||||| ||||||||||| || | ||||| ||||| || |||||
Sbjct 417 ACTTCTAGAGTGATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 466
>seq15021
Length=1916
Score = 138 bits (152), Expect = 2e-27
Identities = 126/159 (79%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| || |||||||| || ||||| || |||| |||||||||||||| || || ||||||
Sbjct 882 TCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCAGGAGGAATACCCTCTTTA 823
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
||||| || |||| ||| | |||| ||||| ||||||| ||| || ||||| || ||
Sbjct 822 TCTTGAATCTTGGCTTTCACATTTTCTATAGTGTCGGAAGCCTCCACCTCTAGGGTGATG 763
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTTA 193364
|| || || ||||| |||||||| ||||| |||||| ||
Sbjct 762 GTCTTCCCCGTTAGGGTTTTTACGAATATCTGCATTGTA 724
>seq5032
Length=315
Score = 116 bits (128), Expect = 7e-21
Identities = 91/105 (87%), Gaps = 3/105 (3%)
Strand=Plus/Minus
Query 263795 GGGAGGTCCGTAGCTACTATGTAAGCCGGTGCTGACGAGGAACCGGTCTAACTCCTTGTC 263854
||||| ||||||||||||| || |||||||| | |||||| ||||||||| |||| | |
Sbjct 272 GGGAG-TCCGTAGCTACTACGTGGGCCGGTGCCGGCGAGGACCCGGTCTAATTCCTCGCC 214
Query 263855 ATCAGATATGTTGAAGCGTATAAGCAATCATATAATGGTAATATA 263899
|| |||||||||||||||| ||||||||||||| ||||||| |||
Sbjct 213 ATGAGATATGTTGAAGCGT-TAAGCAATCATAT-ATGGTAAAATA 171
>seq174000
Length=6590
Score = 111 bits (122), Expect = 3e-19
Identities = 165/234 (71%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 146165 TTTAAAGATTGGCCACCATCTATTTCACAAAAACCAGAAGACTTAGCAGAAGCTGGATTC 146224
|| ||||||||||| |||||| || ||||| ||||| ||||| || || || |||
Sbjct 3126 TTCAAAGATTGGCCTAGATCTATCCGTCAGAAACCGGAAGATTTAGCCGAGGCCGGCTTC 3067
Query 146225 TTTTATACGGGATTAAGCGATAAAGTTAAATGCTTCTATTGTGATGGCGGATTAAAAGAT 146284
|||||||| ||| | | || || |||||||| |||||||| ||||| | ||||||
Sbjct 3066 TTTTATACAGGACAAGGTGACAAGACCAAATGCTTTTATTGTGACGGCGGTCTTAAAGAT 3007
Query 146285 TGGAAAGCGGGTGAATTACCTTGGAAAGAACACGCTCGTTGGTATGATAAATGTGAATAT 146344
||| || | ||| |||| ||| |||||||||| || |||| | ||||| |||
Sbjct 3006 TGGGAAAACGATGACATACCGTGGGAAGAACACGCACGATGGTTCAGTCGATGTGCCTAT 2947
Query 146345 GTAAAAATAGTAAAAGGTTTAGATTTTATTCAACGCGTTATGTCCGAAGCTTGC 146398
| | | ||||| ||| ||||| | ||| | |||| | ||||| |||
Sbjct 2946 CTCCAGCTTGTAAAGGGTAAAGATTACGTCCAAAGAGTTAACACAGAAGCCTGC 2893
>seq221927
Length=1596
Score = 89.7 bits (98), Expect = 9e-13
Identities = 70/81 (86%), Gaps = 2/81 (2%)
Strand=Plus/Minus
Query 263819 GCCGGTGCTGACGAGGAACCGGTCTAACTCCTTGTCATCAGATATGTTGAAGCGTATAAG 263878
|||||||| | |||||| |||| |||| || | | |||||||||||||||||||| ||||
Sbjct 644 GCCGGTGCCGGCGAGGATCCGGGCTAATTCGTCGCCATCAGATATGTTGAAGCGT-TAAG 586
Query 263879 CAATCATATAATGGTAATATA 263899
||||||||| ||||||| |||
Sbjct 585 CAATCATAT-ATGGTAAAATA 566
>seq199221
Length=2732
Score = 89.7 bits (98), Expect = 9e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 263800 GTCCGTAGCTACTATGTAAGCCGGTGCTGACGAGGAACCGGTCTAACTCCTTGTCATCAG 263859
||||||||||||||||| |||||||| | |||||| |||| |||| |||| | ||||||
Sbjct 289 GTCCGTAGCTACTATGTGGGCCGGTGCCGGCGAGGATCCGGGCTAATTCCTCGCCATCAG 230
Query 263860 ATATGTTGAAGC 263871
||||||||||||
Sbjct 229 ATATGTTGAAGC 218
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 896876008562160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |