Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq67196 149 1e-30 seq15021 138 2e-27 seq5032 116 7e-21 seq174000 111 3e-19 seq221927 89.7 9e-13 seq199221 89.7 9e-13 >seq67196 Length=1848 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | || ||||| |||||||| |||| ||||| |||||| ||||| Sbjct 9 ATACCACCACGGAGACGCAGTACAAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCA 68 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 |||| || | ||| || | |||||| || || ||||| | |||||| || || || Sbjct 69 GATAGGGTGCGCCCATCTTCAAGTTGTTTGCCAGCGAAAATCAGTCTCTGCTGGTCTGGG 128 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || || |||||||| || |||| ||||| ||| |||||| || || | ||| Sbjct 129 GGGATCCCCTCCTTATCTTGAATCTTGGCTTTTACATTCTCAATAGTGTCTGATGGCTCT 188 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || |||||||| ||||||||||| || | ||||| ||||| || ||||| Sbjct 189 ACCTCTAGAGTAATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 238 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | || | |||||||| | || | ||||| ||||||||||| Sbjct 237 ATACCACCACGGAGACGCAAAACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCA 296 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 |||| || | ||| || | |||||||| ||||| || | | |||||||| || Sbjct 297 GATAGGGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGC 356 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| ||||| || || |||| ||| | |||| ||| || || || | |||| Sbjct 357 GGAATACCTTCCTTATCCTGAATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCA 416 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||||||||| ||||||||||| || | ||||| ||||| || ||||| Sbjct 417 ACTTCTAGAGTGATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 466 >seq15021 Length=1916 Score = 138 bits (152), Expect = 2e-27 Identities = 126/159 (79%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || |||||||| || ||||| || |||| |||||||||||||| || || |||||| Sbjct 882 TCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCAGGAGGAATACCCTCTTTA 823 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || |||| ||| | |||| ||||| ||||||| ||| || ||||| || || Sbjct 822 TCTTGAATCTTGGCTTTCACATTTTCTATAGTGTCGGAAGCCTCCACCTCTAGGGTGATG 763 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTTA 193364 || || || ||||| |||||||| ||||| |||||| || Sbjct 762 GTCTTCCCCGTTAGGGTTTTTACGAATATCTGCATTGTA 724 >seq5032 Length=315 Score = 116 bits (128), Expect = 7e-21 Identities = 91/105 (87%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 263795 GGGAGGTCCGTAGCTACTATGTAAGCCGGTGCTGACGAGGAACCGGTCTAACTCCTTGTC 263854 ||||| ||||||||||||| || |||||||| | |||||| ||||||||| |||| | | Sbjct 272 GGGAG-TCCGTAGCTACTACGTGGGCCGGTGCCGGCGAGGACCCGGTCTAATTCCTCGCC 214 Query 263855 ATCAGATATGTTGAAGCGTATAAGCAATCATATAATGGTAATATA 263899 || |||||||||||||||| ||||||||||||| ||||||| ||| Sbjct 213 ATGAGATATGTTGAAGCGT-TAAGCAATCATAT-ATGGTAAAATA 171 >seq174000 Length=6590 Score = 111 bits (122), Expect = 3e-19 Identities = 165/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 146165 TTTAAAGATTGGCCACCATCTATTTCACAAAAACCAGAAGACTTAGCAGAAGCTGGATTC 146224 || ||||||||||| |||||| || ||||| ||||| ||||| || || || ||| Sbjct 3126 TTCAAAGATTGGCCTAGATCTATCCGTCAGAAACCGGAAGATTTAGCCGAGGCCGGCTTC 3067 Query 146225 TTTTATACGGGATTAAGCGATAAAGTTAAATGCTTCTATTGTGATGGCGGATTAAAAGAT 146284 |||||||| ||| | | || || |||||||| |||||||| ||||| | |||||| Sbjct 3066 TTTTATACAGGACAAGGTGACAAGACCAAATGCTTTTATTGTGACGGCGGTCTTAAAGAT 3007 Query 146285 TGGAAAGCGGGTGAATTACCTTGGAAAGAACACGCTCGTTGGTATGATAAATGTGAATAT 146344 ||| || | ||| |||| ||| |||||||||| || |||| | ||||| ||| Sbjct 3006 TGGGAAAACGATGACATACCGTGGGAAGAACACGCACGATGGTTCAGTCGATGTGCCTAT 2947 Query 146345 GTAAAAATAGTAAAAGGTTTAGATTTTATTCAACGCGTTATGTCCGAAGCTTGC 146398 | | | ||||| ||| ||||| | ||| | |||| | ||||| ||| Sbjct 2946 CTCCAGCTTGTAAAGGGTAAAGATTACGTCCAAAGAGTTAACACAGAAGCCTGC 2893 >seq221927 Length=1596 Score = 89.7 bits (98), Expect = 9e-13 Identities = 70/81 (86%), Gaps = 2/81 (2%) Strand=Plus/Minus Query 263819 GCCGGTGCTGACGAGGAACCGGTCTAACTCCTTGTCATCAGATATGTTGAAGCGTATAAG 263878 |||||||| | |||||| |||| |||| || | | |||||||||||||||||||| |||| Sbjct 644 GCCGGTGCCGGCGAGGATCCGGGCTAATTCGTCGCCATCAGATATGTTGAAGCGT-TAAG 586 Query 263879 CAATCATATAATGGTAATATA 263899 ||||||||| ||||||| ||| Sbjct 585 CAATCATAT-ATGGTAAAATA 566 >seq199221 Length=2732 Score = 89.7 bits (98), Expect = 9e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 263800 GTCCGTAGCTACTATGTAAGCCGGTGCTGACGAGGAACCGGTCTAACTCCTTGTCATCAG 263859 ||||||||||||||||| |||||||| | |||||| |||| |||| |||| | |||||| Sbjct 289 GTCCGTAGCTACTATGTGGGCCGGTGCCGGCGAGGATCCGGGCTAATTCCTCGCCATCAG 230 Query 263860 ATATGTTGAAGC 263871 |||||||||||| Sbjct 229 ATATGTTGAAGC 218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 896876008562160