Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq67196 123 4e-23 seq15021 113 7e-20 >seq67196 Length=1848 Score = 123 bits (136), Expect = 4e-23 Identities = 137/183 (75%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| || || | ||||| |||||||||||||| || || || ||||||||| ||| Sbjct 923 AATGCAGATTTTCGTGAAAACTTTGACTGGAAAAACGATCACCTTGGAAGTCGAACCTTC 864 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 |||| ||| ||||| ||| ||| || || || |||||||| || || ||||| || Sbjct 863 AGATACTATCGAGAACGTTAAAGCTAAGATTCAGGACAAAGAAGGTATCCCCCCAGATCA 804 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 || | |||||| ||| || |||||| | ||||| | | ||||| |||||||| || Sbjct 803 GCAGCGTCTGATTTTTGCTGGAAAGCAGTTGGAAGACGGCCGTACTTTGTCAGATTACAA 744 Query 156002 TAT 156004 ||| Sbjct 743 TAT 741 Score = 107 bits (118), Expect = 3e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| ||||||| | ||||| |||||||||||| | ||||| || || Sbjct 694 ATGCAGATCTTTGTTAAAACCCTTACTGGCAAAACTATTACACTTGAAGTTGAGCCATCG 635 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| |||||| || |||||| |||||||| ||||| || || ||||| || Sbjct 634 GACACAATTGAAAACGTTAAGGCTAAAATTCAAGATAAGGAAGGGATCCCCCCAGACCAG 575 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || ||| |||||| ||| || || || || |||||| | || |||| || || ||| Sbjct 574 CAGAGAATGATTTTTGCTGGCAAACAACTTGAAGATGGGCGTACCCTATCTGACTACAAT 515 Query 156003 AT 156004 || Sbjct 514 AT 513 Score = 95.1 bits (104), Expect = 2e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| ||||||| |||||||| ||||||||||| |||| || || || Sbjct 238 ATGCAGATCTTTGTTAAAACCTTGACTGGTAAAACTATTACTCTAGAGGTAGAGCCATCA 179 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | |||| || || ||| || || |||||||| || || || || ||||| || Sbjct 178 GACACTATTGAGAATGTAAAAGCCAAGATTCAAGATAAGGAGGGGATCCCCCCAGACCAG 119 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || ||| |||||| || || || || || |||||| | || |||| || || ||| Sbjct 118 CAGAGACTGATTTTCGCTGGCAAACAACTTGAAGATGGGCGCACCCTATCTGACTACAAT 59 Query 156003 AT 156004 || Sbjct 58 AT 57 >seq15021 Length=1916 Score = 113 bits (124), Expect = 7e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 155819 TAAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGA 155878 || |||||| ||||| | ||||| | || || || || || || |||| || || | Sbjct 724 TACAATGCAGATATTCGTAAAAACCCTAACGGGGAAGACCATCACCCTAGAGGTGGAGGC 783 Query 155879 TTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGA 155938 ||| || | ||| ||| |||||| || || ||||||||||| || || ||||| || Sbjct 784 TTCCGACACTATAGAAAATGTGAAAGCCAAGATTCAAGATAAAGAGGGTATTCCTCCTGA 843 Query 155939 ACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTA 155998 |||||| ||||||| | ||| ||||| || | ||||| | | || | || ||||| Sbjct 844 TCAACAACGATTGATCTTTGCTGGTAAACAATTGGAAGACGGCCGCACACTTTCTGATTA 903 Query 155999 TAATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 ||||| ||||| | || ||||| || |||||||| | ||||| ||| Sbjct 904 CAATATTCAGAAAGAATCTACTCTTCACTTGGTGTTAAGGCTCAGAGGAGGT 955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729611768850800