Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq15021 156 8e-33
seq67196 154 3e-32
seq159217 87.8 3e-12
>seq15021
Length=1916
Score = 156 bits (172), Expect = 8e-33
Identities = 178/238 (75%), Gaps = 1/238 (0%)
Strand=Plus/Minus
Query 171837 ATAAT-ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATA 171895
||||| ||| ||||| || | ||| || || || | ||||| ||||| |||||| ||
Sbjct 961 ATAATTACCTCCTCTGAGCCTTAACACCAAGTGAAGAGTAGATTCTTTCTGAATATTGTA 902
Query 171896 ATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTC 171955
||| || | | || |||| |||||||||||||||||||| || |||| ||||| ||
Sbjct 901 ATCAGAAAGTGTGCGGCCGTCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATC 842
Query 171956 AGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGA 172015
||| || || || ||||||||||| || || ||| ||||| |||||| || || |
Sbjct 841 AGGAGGAATACCCTCTTTATCTTGAATCTTGGCTTTCACATTTTCTATAGTGTCGGAAGC 782
Query 172016 TTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTA 172073
|| || ||||| || ||||| || || |||| ||||| | ||||||||||||| ||
Sbjct 781 CTCCACCTCTAGGGTGATGGTCTTCCCCGTTAGGGTTTTTACGAATATCTGCATTGTA 724
>seq67196
Length=1848
Score = 154 bits (170), Expect = 3e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | || || | ||| | ||| ||||||| ||||| |||||| || ||
Sbjct 9 ATACCACCACGGAGACGCAGTACAAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCA 68
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|||| | || | || || | |||||| ||||| ||||| | |||||| ||||| ||
Sbjct 69 GATAGGGTGCGCCCATCTTCAAGTTGTTTGCCAGCGAAAATCAGTCTCTGCTGGTCTGGG 128
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || || |||||||| || || ||||||||| ||||| ||||| | |||
Sbjct 129 GGGATCCCCTCCTTATCTTGAATCTTGGCTTTTACATTCTCAATAGTGTCTGATGGCTCT 188
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| ||||||||||| ||||||||||| || ||||||| || ||||||||
Sbjct 189 ACCTCTAGAGTAATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 238
Score = 150 bits (166), Expect = 3e-31
Identities = 172/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||| || | |||||||| || | ||||||||| | ||||| |||||| ||||||
Sbjct 693 ATACCTCCGCGAAGTCGTAGAACAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCT 752
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| |||| || |||| ||||| || || ||||||||||| | | ||| || || ||
Sbjct 753 GACAAAGTACGGCCGTCTTCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGG 812
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || |||||||| || || || ||| ||| || || ||||||||||| | |||
Sbjct 813 GGGATACCTTCTTTGTCCTGAATCTTAGCTTTAACGTTCTCGATAGTATCTGAAGGTTCG 872
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| | || || ||||| ||||| || ||||| | ||| |||||||||
Sbjct 873 ACTTCCAAGGTGATCGTTTTTCCAGTCAAAGTTTTCACGAAAATCTGCATT 923
Score = 136 bits (150), Expect = 7e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | || || | ||||| ||| ||||||| ||||| |||||| || ||
Sbjct 465 ATACCACCACGCAGACGCAGTACTAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCA 524
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|||| | || | || || | |||||| ||||||||||| | |||||| ||||| ||
Sbjct 525 GATAGGGTACGCCCATCTTCAAGTTGTTTGCCAGCAAAAATCATTCTCTGCTGGTCTGGG 584
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| |||||||| |||||| || || || || || || || | ||
Sbjct 585 GGGATCCCTTCCTTATCTTGAATTTTAGCCTTAACGTTTTCAATTGTGTCCGATGGCTCA 644
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| || ||||| ||||| ||||| | ||||||| || ||||||||
Sbjct 645 ACTTCAAGTGTAATAGTTTTGCCAGTAAGGGTTTTAACAAAGATCTGCAT 694
Score = 104 bits (114), Expect = 4e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | || || || || | ||| | || | ||||| |||||||| ||
Sbjct 237 ATACCACCACGGAGACGCAAAACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCA 296
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|||| | || | || || | ||||| |||||||| || | | ||||| || ||
Sbjct 297 GATAGGGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGC 356
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| ||||| || || || ||| ||||| || || || || | ||
Sbjct 357 GGAATACCTTCCTTATCCTGAATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCA 416
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||||||||| || ||||||||||| || ||||||| || ||||||||
Sbjct 417 ACTTCTAGAGTGATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 466
>seq159217
Length=3482
Score = 87.8 bits (96), Expect = 3e-12
Identities = 77/96 (80%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 38830 ATTTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTA 38889
||||||||||||| |||||| ||||| || ||||||||||| ||||| | || ||||
Sbjct 2884 ATTTTTGGTATTCCCCAACTTTCTTTTCAAAGAAGTTTGTTTTGCCTTCCAGAGAAATTA 2943
Query 38890 AATTCATAAAATCAAATGGATTTTTGGTATTATAAT 38925
|||||||| |||||||| || || || || ||||
Sbjct 2944 GGTTCATAAAGTCAAATGGGTTCTTTGTGTTGTAAT 2979
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 902340679805400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |