Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq168888 176 1e-38 seq61418 86.0 2e-11 >seq168888 Length=4095 Score = 176 bits (194), Expect = 1e-38 Identities = 304/433 (70%), Gaps = 8/433 (2%) Strand=Plus/Minus Query 155312 TTCCAGAGCCGCAAAATAAATTGTCTCAAAGATATATTTATTGACTGTTTTAGCCTCCTC 155371 ||| || ||| | ||||||| || ||||| || | || ||| | | | | || | || Sbjct 2575 TTCTAGTGCCCCGTAATAAATGGTTTCAAATATTTGTTGATTAAGTTTCATCGCTGCATC 2516 Query 155372 AGATGTAAATGCGATATCCATCTTGAAAAATGTGTCGGCTAAACCCTGAACTCCAATACC 155431 | | | |||| || |||| || |||||| || |||| || ||||| ||||| || Sbjct 2515 ACTTTCATATGCAATGCGCATCAAGACAAATGTATCTGCTAGCCCTTGAACACCAATTCC 2456 Query 155432 GACTGGGCGATGCCTG-TAATTGCTCCTGCTTGTCTTCTTGTTTGGGTAAAAATTCACAT 155490 | || | |||||| || ||| | | |||| || | | | || || ||||| |||| Sbjct 2455 TATAGGCCTATGCCTCATATTTGATTTT-CTTGCCTCCGGGATCGGATAGAAATTAACAT 2397 Query 155491 CAATAATGTTATTTAAATTTGTAACCAATACCTT-GGTTACGTCTGCTAATTTCACATAG 155549 |||| || |||||||| ||| | | |||| || ||| || ||| |||||| | | Sbjct 2396 CAATGATTTTATTTAAGTTT-TGAGTAATAATTTTGGTGACTTCTTTTAATTTATTAAAA 2338 Query 155550 TCAAATGTTTTATCCTCATTTACAAACATACCAAGACCAATAGACGCCAGATTACATACC 155609 | | |||||||||| ||||| |||||||| | | ||||||| || | |||||| ||| Sbjct 2337 TTATATGTTTTATCTTCATTAACAAACATGTTCAAAGCAATAGATGCTAAATTACACACC 2278 Query 155610 GCAGTCTCCTT--GTCGTCGCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGA 155667 || | || | | | | || ||||||| || |||||| ||| | |||| || || | Sbjct 2277 GC-GACTTCGTCAGCTGACG-TGTATTCAACGATCTCAGTGCATAAGTTACTACATTTTA 2220 Query 155668 TGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATG 155727 | |||||||| ||||| |||||| ||| ||||||||||| || ||||| || || || | Sbjct 2219 TAGTGCCTAAGTTCTTTTGGTTACTTTTCCTGTTACAAGCGTCTTTGTAAAGCATATAGG 2160 Query 155728 GGGTTCCTGTCTC 155740 | ||||| || || Sbjct 2159 GTGTTCCCGTTTC 2147 >seq61418 Length=2424 Score = 86.0 bits (94), Expect = 2e-11 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 252571 GCCTGCTTTCCCATAGCACTCTGGTAAGTATTTCTGGGAGACTGATTGTTTTCCGGGAAA 252630 || || || |||||||||||||||||||||||||||||| ||||||| || |||||| Sbjct 2396 GCTTGTTTACCCATAGCACTCTGGTAAGTATTTCTGGGACTTTGATTGTGATCAGGGAAA 2337 Query 252631 GGAATGCATGATGCTACAACACCGAAGATAGTGCTTGGGTGAATTTCACAGTGACTGTAA 252690 ||||| || || |||||| || || | || ||||||||||| || ||||| Sbjct 2336 GGAATAATGGAAGCACAAACACCCAATATCATAGCAGGATGAATTTCACAATGTGTGTAA 2277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1467158569206231