Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq168888 176 1e-38
seq61418 86.0 2e-11
>seq168888
Length=4095
Score = 176 bits (194), Expect = 1e-38
Identities = 304/433 (70%), Gaps = 8/433 (2%)
Strand=Plus/Minus
Query 155312 TTCCAGAGCCGCAAAATAAATTGTCTCAAAGATATATTTATTGACTGTTTTAGCCTCCTC 155371
||| || ||| | ||||||| || ||||| || | || ||| | | | | || | ||
Sbjct 2575 TTCTAGTGCCCCGTAATAAATGGTTTCAAATATTTGTTGATTAAGTTTCATCGCTGCATC 2516
Query 155372 AGATGTAAATGCGATATCCATCTTGAAAAATGTGTCGGCTAAACCCTGAACTCCAATACC 155431
| | | |||| || |||| || |||||| || |||| || ||||| ||||| ||
Sbjct 2515 ACTTTCATATGCAATGCGCATCAAGACAAATGTATCTGCTAGCCCTTGAACACCAATTCC 2456
Query 155432 GACTGGGCGATGCCTG-TAATTGCTCCTGCTTGTCTTCTTGTTTGGGTAAAAATTCACAT 155490
| || | |||||| || ||| | | |||| || | | | || || ||||| ||||
Sbjct 2455 TATAGGCCTATGCCTCATATTTGATTTT-CTTGCCTCCGGGATCGGATAGAAATTAACAT 2397
Query 155491 CAATAATGTTATTTAAATTTGTAACCAATACCTT-GGTTACGTCTGCTAATTTCACATAG 155549
|||| || |||||||| ||| | | |||| || ||| || ||| |||||| | |
Sbjct 2396 CAATGATTTTATTTAAGTTT-TGAGTAATAATTTTGGTGACTTCTTTTAATTTATTAAAA 2338
Query 155550 TCAAATGTTTTATCCTCATTTACAAACATACCAAGACCAATAGACGCCAGATTACATACC 155609
| | |||||||||| ||||| |||||||| | | ||||||| || | |||||| |||
Sbjct 2337 TTATATGTTTTATCTTCATTAACAAACATGTTCAAAGCAATAGATGCTAAATTACACACC 2278
Query 155610 GCAGTCTCCTT--GTCGTCGCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGA 155667
|| | || | | | | || ||||||| || |||||| ||| | |||| || || |
Sbjct 2277 GC-GACTTCGTCAGCTGACG-TGTATTCAACGATCTCAGTGCATAAGTTACTACATTTTA 2220
Query 155668 TGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATG 155727
| |||||||| ||||| |||||| ||| ||||||||||| || ||||| || || || |
Sbjct 2219 TAGTGCCTAAGTTCTTTTGGTTACTTTTCCTGTTACAAGCGTCTTTGTAAAGCATATAGG 2160
Query 155728 GGGTTCCTGTCTC 155740
| ||||| || ||
Sbjct 2159 GTGTTCCCGTTTC 2147
>seq61418
Length=2424
Score = 86.0 bits (94), Expect = 2e-11
Identities = 91/120 (76%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 252571 GCCTGCTTTCCCATAGCACTCTGGTAAGTATTTCTGGGAGACTGATTGTTTTCCGGGAAA 252630
|| || || |||||||||||||||||||||||||||||| ||||||| || ||||||
Sbjct 2396 GCTTGTTTACCCATAGCACTCTGGTAAGTATTTCTGGGACTTTGATTGTGATCAGGGAAA 2337
Query 252631 GGAATGCATGATGCTACAACACCGAAGATAGTGCTTGGGTGAATTTCACAGTGACTGTAA 252690
||||| || || |||||| || || | || ||||||||||| || |||||
Sbjct 2336 GGAATAATGGAAGCACAAACACCCAATATCATAGCAGGATGAATTTCACAATGTGTGTAA 2277
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1467158569206231
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |