Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq131719 206 2e-48 seq15021 116 3e-21 seq67196 111 1e-19 seq174000 98.7 8e-16 seq100694 89.7 4e-13 >seq131719 Length=2163 Score = 206 bits (228), Expect = 2e-48 Identities = 352/503 (70%), Gaps = 8/503 (2%) Strand=Plus/Plus Query 28809 GCGTATTTTGTGGAATGGAGCGTGTACGGCCGCAACTTTTCGGTGGACAAGGTGCCGCTG 28868 || || || || |||||| | ||||| | || || | |||||| |||||| | Sbjct 1560 GCTTACTTCGTAGAATGGGGAGTGTATCCGAGGAAGTTCCCCGTGGACCGCGTGCCGATC 1619 Query 28869 CCCAACCTCTCGCATCTGTTATACGGCTTCGTACCTATTTGCGGCGGCGACGGGCTCAAC 28928 ||||| || | || |||| ||||| ||| | || || ||||| |||||||| ||||| Sbjct 1620 CCCAATCTGACTCACTTGTTGTACGGGTTCATTCCGATCTGCGGAGGCGACGGCATCAAC 1679 Query 28929 GACGCCCTTAAAACCATACCCGGTAGTTTTGAAGCGCTGCAACGTTCGTGCAACGGCCGT 28988 ||| || || || || ||||| | || || || ||||| |||| |||||| Sbjct 1680 GACAGTCTGAAGGAGATTGAGGGCAGTTTCCAGGCACTCCAGCGTTCCTGCAGCGGCCGC 1739 Query 28989 TCAGATTTTAAAGTTGCTATTCACGATCCTTGGGCCGCAATACAAAAACCGCAAAAGGGC 29048 ||| || ||||| | ||||| || || |||||||| | || ||||| ||||||||| Sbjct 1740 GAAGACTTCAAAGTGTCCATTCATGACCCCTGGGCCGCTCTTCAGAAACCACAAAAGGGC 1799 Query 29049 GTGTCTGCGTGGAACGAGCCCTACAAAGGCAATTTCGGTCAGCTCATG--GCTGCCAAGT 29106 | ||| | |||||||| || |||||||| || ||||| || || ||| | || || Sbjct 1800 CTTTCTTCATGGAACGAACCTTACAAAGGAAACTTCGGCCAACTGATGATGTTG--AAAC 1857 Query 29107 TGGCCAATCCACACATCAAAATTCTACCGTCCATAGGCGGCTGGACATTGTCCGACCCTT 29166 ||| | ||| || |||| ||| | || ||| | ||||||||||| ||| | || || | Sbjct 1858 AGGCGAGACCAGACCTCAAGATTTTGCCTTCCGTCGGCGGCTGGACTTTGGCTGATCCAT 1917 Query 29167 TTTATTTTATGCAC-GACGCGGAGAAACG-GCGCGTGTTTGTGGACTCGGTCGAGGAATT 29224 | | |||| | ||| ||| | || || | ||| || || | || || | || || Sbjct 1918 TCT-TTTTCTTCACTGACAAGACAAAGCGTGACCGT-TTCGTTGCTTCCGTAAAAGACTT 1975 Query 29225 TTTGCAGGTGTGGAAATTTTTTGACGGCGTAGACATTGACTGGGAATTTCCGGGCGGTAA 29284 | ||| |||||||| ||||||||||| || || || ||||| || || || ||||| Sbjct 1976 CCTCCAGACCTGGAAATTCTTTGACGGCGTCGATATCGATTGGGAGTTCCCTGGAGGTAA 2035 Query 29285 AGGCGCTAACCCGACACTTGGCA 29307 |||||||||||| | || |||| Sbjct 2036 AGGCGCTAACCCCAATCTCGGCA 2058 >seq15021 Length=1916 Score = 116 bits (128), Expect = 3e-21 Identities = 169/239 (71%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 110264 AGATTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACG 110323 || |||| |||||| ||||| || ||||| |||| || || ||||| ||| | || | Sbjct 719 AGTTTTACAATGCAGATATTCGTAAAAACCCTAACGGGGAAGACCATCACCCTAGAGGTG 778 Query 110324 GAGCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCC 110383 ||| || ||| ||| | | | || ||| |||||| || ||||| || | || Sbjct 779 GAGGCTTCCGACACTATAGAAAATGTGAAAGCCAAGATTCAAGATAAAGAGGGTATTCCT 838 Query 110384 GTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCG 110443 ||||||||| || | || | ||| |||||||| |||| || | | | ||| | | Sbjct 839 CCTGATCAACAACGATTGATCTTTGCTGGTAAACAATTGGAAGACGGCCGCACACTTTCT 898 Query 110444 GATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAAA 110502 |||||||| ||||| ||||||||||| | ||| |||||||||| || |||| || || Sbjct 899 GATTACAATATTCAGAAAGAATCTACTCTTCACTTGGTGTTAAGGCTCAGAGGAGGTAA 957 >seq67196 Length=1848 Score = 111 bits (122), Expect = 1e-19 Identities = 166/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 110264 AGATTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACG 110323 ||||| | |||||| || || || |||||||| || || ||||| || ||| | ||| Sbjct 931 AGATTCATAATGCAGATTTTCGTGAAAACTTTGACTGGAAAAACGATCACCTTGGAAGTC 872 Query 110324 GAGCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCC 110383 || ||| |||||| ||| | || ||| |||||| ||||||||||| | ||| Sbjct 871 GAACCTTCAGATACTATCGAGAACGTTAAAGCTAAGATTCAGGACAAAGAAGGTATCCCC 812 Query 110384 GTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCG 110443 ||||| || | || |||| ||| || || ||| |||| || | | | || || | Sbjct 811 CCAGATCAGCAGCGTCTGATTTTTGCTGGAAAGCAGTTGGAAGACGGCCGTACTTTGTCA 752 Query 110444 GATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||| |||||||||||||| || || || | || || |||| || || || Sbjct 751 GATTACAATATTCAAAAAGAATCCACTTTACATCTTGTTCTACGACTTCGCGGAGG 696 >seq174000 Length=6590 Score = 98.7 bits (108), Expect = 8e-16 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 103736 GCCGAAGCTGGTTTCTTTTACACCGGCAAAAGCGACAAAGTCAAATGCTTTTACTGCAAC 103795 ||||| || || |||||||| || || || | ||||| |||||||||||| || || Sbjct 3081 GCCGAGGCCGGCTTCTTTTATACAGGACAAGGTGACAAGACCAAATGCTTTTATTGTGAC 3022 Query 103796 GGCGGTCTGAACAATTGGGAGCAAGATGACGACCCGTGGCAACAACACGCGCTTTGGTTC 103855 |||||||| || ||||||| | |||||| |||||| || ||||||| | |||||| Sbjct 3021 GGCGGTCTTAAAGATTGGGAAAACGATGACATACCGTGGGAAGAACACGCACGATGGTTC 2962 Query 103856 GGACGCTGCGCATACGTGCTACTTGTCAAAGGCCACGATTATGTACAAA 103904 | || || || || | | ||||| || || | ||||| || |||| Sbjct 2961 AGTCGATGTGCCTATCTCCAGCTTGTAAAGGGTAAAGATTACGTCCAAA 2913 Score = 86.0 bits (94), Expect = 5e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 103321 CAACGGGTTCTACTATTTGGGCCGCAGCGACGAGGTGCGCTGCGCGTTTTGCAAAGTGGA 103380 |||||| |||||||| | ||| | | || || || || || || |||||||| || || Sbjct 3412 CAACGGCTTCTACTACCTAGGCAGGGGTGATGAAGTTCGTTGTGCTTTTTGCAAGGTTGA 3353 Query 103381 AATCATGCGCTGGATGAATGGCGACGACCCGGAGAGCGACCATAAAAAGTGGGCGCCTCG 103440 |||||||| ||| | | || |||||||| | || ||| || ||||||||||| Sbjct 3352 GATCATGCGGTGGGAGGAAGGGGACGACCCCGCTGCAGATCATCAACGGTGGGCGCCTCA 3293 Query 103441 ATGCCCGTTTTTGCGTA 103457 |||||| ||| |||||| Sbjct 3292 ATGCCCCTTTCTGCGTA 3276 >seq100694 Length=282 Score = 89.7 bits (98), Expect = 4e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 94121 TTCTTCTGGCCCATGCGGTGGATGCGGTCCTGCGCCTGCAGCTCGATCTGCGGGTTCCAA 94180 |||||||| |||| ||||| |||||||||||||||||| | || | |||||| |||||| Sbjct 233 TTCTTCTGACCCACGCGGTAGATGCGGTCCTGCGCCTGTTGTTCCAGCTGCGGATTCCAA 174 Query 94181 TGCGGCTCCAACATAATTATGTGATTGCCGCCGGTTAAATTTAATCCCACGCCGCCG 94237 || || || | || | | |||||| | ||| ||| || || || ||||||||| Sbjct 173 TGTGGATCGAGCAGTAGCAGATGATTGGCACCGCATAAGTTCAAACCTACGCCGCCG 117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 411598500786059