Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq131719 170 1e-37
seq67196 102 5e-17
seq193007 84.2 1e-11
>seq131719
Length=2163
Score = 170 bits (188), Expect = 1e-37
Identities = 337/497 (68%), Gaps = 14/497 (3%)
Strand=Plus/Minus
Query 6034 TTGGCACCCTTTCCACCCGGAAACTCCCAGTCGATGTCCACTCCGTCAAAGAACTTCCAG 6093
|| || || || || || || |||||||| ||||| || || ||||||||||| ||||||
Sbjct 2044 TTAGCGCCTTTACCTCCAGGGAACTCCCAATCGATATCGACGCCGTCAAAGAATTTCCAG 1985
Query 6094 GTCTCCAGAAACTCGCGGACGCTTGTGACGAACACCTCACGCTTAGAGTCATCGTTCATG 6153
|||| || || || ||| | ||||| |||||||| | | || | | |
Sbjct 1984 GTCTGGAGGAAGTCTTTTACGGAAGCAACGAAACGGTCACGCTTTGTCTTGTCAGTGAAG 1925
Query 6154 AAATAAAACGGATCGCTCAACGTCCACCCCCCTATGGATGGTAGGACCGTCAACGAGGGG 6213
||| | || ||||| ||| ||||| || || | ||| || | | | | ||||
Sbjct 1924 AAAAAGAATGGATCAGCCAAAGTCCAGCCGCCGACGGAAGGCAAAATCTT----GAGGTC 1869
Query 6214 TTGTGACG----TTTGATGGCCATCAGCTGGCCAAAGTTACCCTTGTACTCTTCGTTGTA 6269
| || || ||| | |||||| ||||| ||||| || ||||| |||||| |
Sbjct 1868 TGGTCTCGCCTGTTTCAACATCATCAGTTGGCCGAAGTTTCCTTTGTAAGGTTCGTTCCA 1809
Query 6270 CGCCTCAACACCTTTCTGTGGTTTTTGCAACGCGGCCCAGATGTCGTGAATACTTACCTT 6329
| || || || |||||||| || | ||||||||| ||| ||||| || ||
Sbjct 1808 TGAAGAAAGGCCCTTTTGTGGTTTCTGAAGAGCGGCCCAGGGGTCATGAATGGACACTTT 1749
Query 6330 GAAGTCATCGCGACCAGCGCAGGATTTCTGTAGCGCCTCAAAGGAATTGGG---AATCTG 6386
|||||| ||||| || |||||| ||| || |||| || | || |||||
Sbjct 1748 GAAGTCTTCGCGGCCGCTGCAGGAACGCTGGAGTGCCTGGAA---ACTGCCCTCAATCTC 1692
Query 6387 CTTGAGGGCGTCGTTTATGCCGCTACCACCACAAATTGGAATGAACCCGTACAGCAGGTG 6446
||| || |||||| |||||| || || || || |||||||||||||||| || |||
Sbjct 1691 CTTCAGACTGTCGTTGATGCCGTCGCCTCCGCAGATCGGAATGAACCCGTACAACAAGTG 1632
Query 6447 CGTCAGATTAGGTATTGGTACCTTGTCAATGGGAAACTGTCTGCCATACACTCCCCACTC 6506
|||||||| || || || || ||| | ||| |||| || |||||||||||| ||
Sbjct 1631 AGTCAGATTGGGGATCGGCACGCGGTCCACGGGGAACTTCCTCGGATACACTCCCCATTC 1572
Query 6507 CACGAAATACGCACCGA 6523
||||| || || ||||
Sbjct 1571 TACGAAGTAAGCTCCGA 1555
>seq67196
Length=1848
Score = 102 bits (112), Expect = 5e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828
||||| |||| |||| || || || || |||||||| |||||| |||| |||| ||
Sbjct 258 ACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCAGATAGGGTGCGGCCATCTTCA 317
Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888
|| || ||||| || |||||||| ||||| || ||| |||| | || ||||| || |
Sbjct 318 AGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGCGGAATACCTTCCTTATCCTGA 377
Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948
|| || |||||| | | || | ||| | ||| || || | || || || ||
Sbjct 378 ATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCAACTTCTAGAGTGATAGTTTTA 437
Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || | ||| || ||||||||||||||
Sbjct 438 CCAGTCAAGGTTTTAACAAAGATCTGCAT 466
Score = 100 bits (110), Expect = 2e-16
Identities = 139/193 (72%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|| |||||||| || ||||| |||||| ||||| |||| || ||||| || || |||||
Sbjct 48 TCTTTCTGAATATTGTAGTCAGATAGGGTGCGCCCATCTTCAAGTTGTTTGCCAGCGAAA 107
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
||||||| ||||||||| | || | ||||||||| || | || || ||| || ||
Sbjct 108 ATCAGTCTCTGCTGGTCTGGGGGGATCCCCTCCTTATCTTGAATCTTGGCTTTTAC--AT 165
Query 34907 GCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964
|| || | || | ||| || || | || || || || || || | ||| || |
Sbjct 166 TCTCAATAGTGTCTGATGGCTCTACCTCTAGAGTAATAGTTTTACCAGTCAAGGTTTTAA 225
Query 34965 CAAAGATCTGCAT 34977
|||||||||||||
Sbjct 226 CAAAGATCTGCAT 238
Score = 96.9 bits (106), Expect = 2e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|| |||||||| || ||||| |||||| | ||| |||| || ||||| || || || ||
Sbjct 504 TCTTTCTGAATATTGTAGTCAGATAGGGTACGCCCATCTTCAAGTTGTTTGCCAGCAAAA 563
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|||| || ||||||||| | || | ||| ||||| || | ||||| || ||| |
Sbjct 564 ATCATTCTCTGCTGGTCTGGGGGGATCCCTTCCTTATCTTGAATTTTAGCCTTAACGTTT 623
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| || | || | ||| || |||| || || || || || || ||||| || |||
Sbjct 624 TCAATTGTGTCCGATGGCTCAACTTCAAGTGTAATAGTTTTGCCAGTAAGGGTTTTAACA 683
Query 34967 AAGATCTGCAT 34977
|||||||||||
Sbjct 684 AAGATCTGCAT 694
>seq193007
Length=659
Score = 84.2 bits (92), Expect = 1e-11
Identities = 151/216 (70%), Gaps = 6/216 (3%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTG-AATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
|| |||| ||| |||| | | || ||||| || || ||||| ||||| |||| ||||
Sbjct 419 AGAACCAAGTGCAATGTAGAT-TCTTTCTGGATATTGTAGTCGGATAGTGTGCGTCCATC 477
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| ||||| ||||| || ||||| || || || |||||| | || | || || |||||
Sbjct 478 TTCAAGTTGTTTTCCAGCAAAGATAAGACGCTGTTGGTCTGGGGGAATACCTTCTTTGTC 537
Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
| ||||| |||||| || || || | || | || || || | || ||
Sbjct 538 TTGAATTTTGGCTTTGAC--ATTCTCAATAGTGTCCGATGGTTCAACTTCTAAAGTGATA 595
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || || || || ||||| |||||||||||||||
Sbjct 596 GTTTTGCCAGTAAGTGTCTTGACAAAGATCTGCATG 631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324712112821997
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |