Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq131719 170 1e-37 seq67196 102 5e-17 seq193007 84.2 1e-11 >seq131719 Length=2163 Score = 170 bits (188), Expect = 1e-37 Identities = 337/497 (68%), Gaps = 14/497 (3%) Strand=Plus/Minus Query 6034 TTGGCACCCTTTCCACCCGGAAACTCCCAGTCGATGTCCACTCCGTCAAAGAACTTCCAG 6093 || || || || || || || |||||||| ||||| || || ||||||||||| |||||| Sbjct 2044 TTAGCGCCTTTACCTCCAGGGAACTCCCAATCGATATCGACGCCGTCAAAGAATTTCCAG 1985 Query 6094 GTCTCCAGAAACTCGCGGACGCTTGTGACGAACACCTCACGCTTAGAGTCATCGTTCATG 6153 |||| || || || ||| | ||||| |||||||| | | || | | | Sbjct 1984 GTCTGGAGGAAGTCTTTTACGGAAGCAACGAAACGGTCACGCTTTGTCTTGTCAGTGAAG 1925 Query 6154 AAATAAAACGGATCGCTCAACGTCCACCCCCCTATGGATGGTAGGACCGTCAACGAGGGG 6213 ||| | || ||||| ||| ||||| || || | ||| || | | | | |||| Sbjct 1924 AAAAAGAATGGATCAGCCAAAGTCCAGCCGCCGACGGAAGGCAAAATCTT----GAGGTC 1869 Query 6214 TTGTGACG----TTTGATGGCCATCAGCTGGCCAAAGTTACCCTTGTACTCTTCGTTGTA 6269 | || || ||| | |||||| ||||| ||||| || ||||| |||||| | Sbjct 1868 TGGTCTCGCCTGTTTCAACATCATCAGTTGGCCGAAGTTTCCTTTGTAAGGTTCGTTCCA 1809 Query 6270 CGCCTCAACACCTTTCTGTGGTTTTTGCAACGCGGCCCAGATGTCGTGAATACTTACCTT 6329 | || || || |||||||| || | ||||||||| ||| ||||| || || Sbjct 1808 TGAAGAAAGGCCCTTTTGTGGTTTCTGAAGAGCGGCCCAGGGGTCATGAATGGACACTTT 1749 Query 6330 GAAGTCATCGCGACCAGCGCAGGATTTCTGTAGCGCCTCAAAGGAATTGGG---AATCTG 6386 |||||| ||||| || |||||| ||| || |||| || | || ||||| Sbjct 1748 GAAGTCTTCGCGGCCGCTGCAGGAACGCTGGAGTGCCTGGAA---ACTGCCCTCAATCTC 1692 Query 6387 CTTGAGGGCGTCGTTTATGCCGCTACCACCACAAATTGGAATGAACCCGTACAGCAGGTG 6446 ||| || |||||| |||||| || || || || |||||||||||||||| || ||| Sbjct 1691 CTTCAGACTGTCGTTGATGCCGTCGCCTCCGCAGATCGGAATGAACCCGTACAACAAGTG 1632 Query 6447 CGTCAGATTAGGTATTGGTACCTTGTCAATGGGAAACTGTCTGCCATACACTCCCCACTC 6506 |||||||| || || || || ||| | ||| |||| || |||||||||||| || Sbjct 1631 AGTCAGATTGGGGATCGGCACGCGGTCCACGGGGAACTTCCTCGGATACACTCCCCATTC 1572 Query 6507 CACGAAATACGCACCGA 6523 ||||| || || |||| Sbjct 1571 TACGAAGTAAGCTCCGA 1555 >seq67196 Length=1848 Score = 102 bits (112), Expect = 5e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 ||||| |||| |||| || || || || |||||||| |||||| |||| |||| || Sbjct 258 ACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCAGATAGGGTGCGGCCATCTTCA 317 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || || ||||| || |||||||| ||||| || ||| |||| | || ||||| || | Sbjct 318 AGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGCGGAATACCTTCCTTATCCTGA 377 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 || || |||||| | | || | ||| | ||| || || | || || || || Sbjct 378 ATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCAACTTCTAGAGTGATAGTTTTA 437 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | ||| || |||||||||||||| Sbjct 438 CCAGTCAAGGTTTTAACAAAGATCTGCAT 466 Score = 100 bits (110), Expect = 2e-16 Identities = 139/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || |||||||| || ||||| |||||| ||||| |||| || ||||| || || ||||| Sbjct 48 TCTTTCTGAATATTGTAGTCAGATAGGGTGCGCCCATCTTCAAGTTGTTTGCCAGCGAAA 107 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 ||||||| ||||||||| | || | ||||||||| || | || || ||| || || Sbjct 108 ATCAGTCTCTGCTGGTCTGGGGGGATCCCCTCCTTATCTTGAATCTTGGCTTTTAC--AT 165 Query 34907 GCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964 || || | || | ||| || || | || || || || || || | ||| || | Sbjct 166 TCTCAATAGTGTCTGATGGCTCTACCTCTAGAGTAATAGTTTTACCAGTCAAGGTTTTAA 225 Query 34965 CAAAGATCTGCAT 34977 ||||||||||||| Sbjct 226 CAAAGATCTGCAT 238 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || |||||||| || ||||| |||||| | ||| |||| || ||||| || || || || Sbjct 504 TCTTTCTGAATATTGTAGTCAGATAGGGTACGCCCATCTTCAAGTTGTTTGCCAGCAAAA 563 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| || ||||||||| | || | ||| ||||| || | ||||| || ||| | Sbjct 564 ATCATTCTCTGCTGGTCTGGGGGGATCCCTTCCTTATCTTGAATTTTAGCCTTAACGTTT 623 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | || | ||| || |||| || || || || || || ||||| || ||| Sbjct 624 TCAATTGTGTCCGATGGCTCAACTTCAAGTGTAATAGTTTTGCCAGTAAGGGTTTTAACA 683 Query 34967 AAGATCTGCAT 34977 ||||||||||| Sbjct 684 AAGATCTGCAT 694 >seq193007 Length=659 Score = 84.2 bits (92), Expect = 1e-11 Identities = 151/216 (70%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 34766 AGGACCAGGTG-AATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 || |||| ||| |||| | | || ||||| || || ||||| ||||| |||| |||| Sbjct 419 AGAACCAAGTGCAATGTAGAT-TCTTTCTGGATATTGTAGTCGGATAGTGTGCGTCCATC 477 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || ||||| ||||| || ||||| || || || |||||| | || | || || ||||| Sbjct 478 TTCAAGTTGTTTTCCAGCAAAGATAAGACGCTGTTGGTCTGGGGGAATACCTTCTTTGTC 537 Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 | ||||| |||||| || || || | || | || || || | || || Sbjct 538 TTGAATTTTGGCTTTGAC--ATTCTCAATAGTGTCCGATGGTTCAACTTCTAAAGTGATA 595 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || || || ||||| ||||||||||||||| Sbjct 596 GTTTTGCCAGTAAGTGTCTTGACAAAGATCTGCATG 631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324712112821997