Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq131719 266 3e-66 seq174000 159 3e-34 seq131720 131 1e-25 >seq131719 Length=2163 Score = 266 bits (294), Expect = 3e-66 Identities = 364/503 (72%), Gaps = 8/503 (2%) Strand=Plus/Plus Query 29073 GCGTATTTTGTAGAATGGGGCGTATATGGCCGCAACTTTCCGGTAGACAAAGTGCCGCTG 29132 || || || ||||||||||| || ||| | || || || || ||| |||||| | Sbjct 1560 GCTTACTTCGTAGAATGGGGAGTGTATCCGAGGAAGTTCCCCGTGGACCGCGTGCCGATC 1619 Query 29133 CCCAACCTCTCGCATCTGTTGTACGGTTTCATACCTATTTGCGGCGGCGACGGGCTCAAC 29192 ||||| || | || |||||||||| ||||| || || ||||| |||||||| ||||| Sbjct 1620 CCCAATCTGACTCACTTGTTGTACGGGTTCATTCCGATCTGCGGAGGCGACGGCATCAAC 1679 Query 29193 GACGCCCTCAAAACCATTCCCGGCAGTTTTGAGGCGCTGCAACGCTCTTGCAAGGGCCGT 29252 ||| || || ||| |||||||| |||| || || || || |||| ||||| Sbjct 1680 GACAGTCTGAAGGAGATTGAGGGCAGTTTCCAGGCACTCCAGCGTTCCTGCAGCGGCCGC 1739 Query 29253 TCAGATTTCAAAGTCGCTATTCACGATCCGTGGGCCGCGATACAAAAACCGCAAAAGGGC 29312 ||| |||||||| | ||||| || || |||||||| | || ||||| ||||||||| Sbjct 1740 GAAGACTTCAAAGTGTCCATTCATGACCCCTGGGCCGCTCTTCAGAAACCACAAAAGGGC 1799 Query 29313 GTGTCTGCGTGGAACGAGCCCTACAAAGGAAACTTCGGTCAGCTAATGGCGGCCAAGCTG 29372 | ||| | |||||||| || ||||||||||||||||| || || ||| | || | | Sbjct 1800 CTTTCTTCATGGAACGAACCTTACAAAGGAAACTTCGGCCAACTGATGATGTTGAAACAG 1859 Query 29373 GCCAATCCGCACCTCAAAATTCTGCCGTCCATCGGCGGCTGGACATTGTCCGACCCGTTC 29432 || | || ||||||| ||| |||| ||| ||||||||||||| ||| | || || ||| Sbjct 1860 GCGAGACCAGACCTCAAGATTTTGCCTTCCGTCGGCGGCTGGACTTTGGCTGATCCATTC 1919 Query 29433 TATTTCATGCAC-GACGCGGAAAAACGGCGTG--TGTTT-GTGGACTCGGTCAGAGAATT 29488 | |||| | ||| ||| | ||| ||||| |||| || | || || | ||| || Sbjct 1920 TTTTTC-TTCACTGACAAGACAAA---GCGTGACCGTTTCGTTGCTTCCGTAAAAGACTT 1975 Query 29489 TCTGCAGGTGTGGAAGTTTTTTGACGGCGTGGACATAGACTGGGAGTTTCCGGGTGGCAA 29548 || ||| ||||| || ||||||||||| || || || |||||||| || || || || Sbjct 1976 CCTCCAGACCTGGAAATTCTTTGACGGCGTCGATATCGATTGGGAGTTCCCTGGAGGTAA 2035 Query 29549 AGGCGCCAACCCGACACTTGGCA 29571 |||||| ||||| | || |||| Sbjct 2036 AGGCGCTAACCCCAATCTCGGCA 2058 >seq174000 Length=6590 Score = 159 bits (176), Expect = 3e-34 Identities = 345/515 (67%), Gaps = 12/515 (2%) Strand=Plus/Minus Query 103558 ACTGGCCGCCAACGGGTTCTTCTACTTGGGCCGCGGCGACGAAGTGCGCTGCGCGTTTTG 103617 |||||| |||||| |||| |||| | ||| | || || ||||| || || || ||||| Sbjct 3421 ACTGGCACGCAACGGCTTCTACTACCTAGGCAGGGGTGATGAAGTTCGTTGTGCTTTTTG 3362 Query 103618 CAAAGTGGAGATTATGCGCTGGGAGGAGGGCGACGACCCGGCTCGCGATCATCAGAGGTG 103677 ||| || ||||| ||||| |||||||| || |||||||| ||| |||||||| |||| Sbjct 3361 CAAGGTTGAGATCATGCGGTGGGAGGAAGGGGACGACCCCGCTGCAGATCATCAACGGTG 3302 Query 103678 GGCGCCGCAGTGTCCGTTCCTG---aaaaaaaCGGCTGCTGGCGCGCTGCCCGCCGG--- 103731 |||||| || || || || ||| || | ||| ||| ||| ||||||| | Sbjct 3301 GGCGCCTCAATGCCCCTTTCTGCGTAACCACACGAGTGCCGGCAATGTGCCCGCGGATAC 3242 Query 103732 CCTTGCGATGGACGGGCAGGACGAGTGCGGCGTGAGCGCGCTGCCGTCCACCAACGCCTG 103791 || | | | |||| | ||||||||||| || | || | || | || | Sbjct 3241 CCCCCCAACGAACGGCCGCGACGAGTGCGGAGTTCGAGCCCCCCCTGCT------GCGTC 3188 Query 103792 CGTGCGCATGCCCGGCCCCGCGCACCCTCGGTTCGCCTCCGAGGCCTCAAGGTTACAAAC 103851 || | ||||||| || | ||||| | ||| || || ||| | | | | Sbjct 3187 GGTTTGTTTGCCCGGTCCGGAACACCCCAAATACGCATCGGAAGCCGCCCGCATCAGCAG 3128 Query 103852 TTTTAAGGATTGGCCCCGGAGTCTGAAACAGAAACCGGAGAAGATGGCCGAAGCCGGATT 103911 || || |||||||| | | | ||||||||||| | | ||||| ||||| || Sbjct 3127 CTTCAAAGATTGGCCTAGATCTATCCGTCAGAAACCGGAAGATTTAGCCGAGGCCGGCTT 3068 Query 103912 CTACTACACCGGCCACAGCGACAACACGAAATGCTTCTACTGCGACGGTGGTCTAAAGGA 103971 || || || || || | ||||| || |||||||| || || ||||| ||||| || || Sbjct 3067 CTTTTATACAGGACAAGGTGACAAGACCAAATGCTTTTATTGTGACGGCGGTCTTAAAGA 3008 Query 103972 TTGGGAGCACGATGATGAGCCGTGGCAACAACACGCGCTTTTCTTTCGCCGTTGCGCATA 104031 |||||| ||||||| |||||| || ||||||| | | || | || || || || Sbjct 3007 TTGGGAAAACGATGACATACCGTGGGAAGAACACGCACGATGGTTCAGTCGATGTGCCTA 2948 Query 104032 CGTGCTACTTGTCAAGGGCCACGATTATGTACAAA 104066 | | ||||| ||||| | ||||| || |||| Sbjct 2947 TCTCCAGCTTGTAAAGGGTAAAGATTACGTCCAAA 2913 >seq131720 Length=1042 Score = 131 bits (144), Expect = 1e-25 Identities = 425/650 (65%), Gaps = 24/650 (4%) Strand=Plus/Plus Query 29610 AAGGAATTGCGCGCAATGATGGACGAGTTACAATTGCAAACGGGCAAAACGTACGAGTTG 29669 |||||| |||||| ||| || ||||| | | |||| || | | ||||||||| Sbjct 29 AAGGAACTGCGCGAGATGTTGAACGAGCTCTCTGCGGAAACTGGAAGGAAATACGAGTTG 88 Query 29670 ACAAGCGCAATCAGTTCCGGACATGACAAGATTGCTGTAGTTAAATACGACGCTGCGCAA 29729 || || |||||| | || |||||||| || || | ||| ||| ||||| Sbjct 89 ACGTCTGCCATCAGTGCTGGTTGGGACAAGATCCAAGTCGTCGATTACAGCGCAGCGCAG 148 Query 29730 AAGTTTCTCGATAAAATATTCCTCATGAGCTACGATTTTAAAGGCGCGTGGTCAAACACC 29789 || | | || | |||||| |||||||||||||||| || || |||||||| || Sbjct 149 AAATACATGGACCACATATTCTTCATGAGCTACGATTTCAAGGGAGCGTGGTC---CAAT 205 Query 29790 GAT----TTGGGCTACCAAACTACTCTCTACGCGCCGAGTTGGAACCCAAACGA-ACTGT 29844 ||| |||| | |||| || |||| ||||| || |||| | || || || ||| | Sbjct 206 GATACTCTTGGTC-ACCAGGCTTCTCTGTACGCTCCATCTTGGCAGCCGAAGGAGACT-T 263 Query 29845 ACAACACGGACCACGCCGTTA---AGTTGCTCACGAACCAGGGCGTGGACCCGCGCAAAA 29901 ||| || || || ||| | | ||| | || || || ||| | || || | Sbjct 264 ACACGACTGATTTCGGCGTGAAATACTTGTTGGCG---CAAGGTGTGAATCCTAAGAAGA 320 Query 29902 TTATTGTGGGCGTCGCCATGTACGGCCGCGGTTGGACAGGCGTGTCGGGTTATGACGGTG 29961 || | || || || ||||||||||| || || ||||| || || |||||||| |||| Sbjct 321 TTGTGGTTGGTGTTGCCATGTACGGACGTGGCTGGACCGGTGTCCACGGTTATGAAGGTG 380 Query 29962 ACAACTATTTTACGGGCACAGCTGCTGGGCCCGTGACCGGCACTTGGGAAGACGGCGTTG 30021 |||| ||| || |||| || | || || || | || |||||| |||| || || | Sbjct 381 ACAATCCTTTCACTGGCAATGCAACGGGTCCTGTTAAAGGTACTTGGCAAGATGGTGTGG 440 Query 30022 TCGACTATCGCCAAATTGAAAACGAAAT--GAACAAGTACAT----TTACAAATTTGACA 30075 | ||||| | |||| | | | || || | | | || ||| | | ||| | Sbjct 441 TGGACTACAGAGAAATAGCAGATGATATAGCTGCTGGGAAATGGGAGTACCATTATGATA 500 Query 30076 CGGCCGCTAAAGCAGCTTACGTTTTCAATAAAGACAAGGGCGATTTAATCTCATTTGACA 30135 || || |||| | ||||| |||| || | || || ||| |||| | | ||| Sbjct 501 AGGTGGCACAAGCGCCATACGTGTTCAGGAAGGCCACCGGAGATCTAATAACGTACGACG 560 Query 30136 GTGTCGATTCTGTATTGGCAAAAAACAGCTACGT-AGATCGAAACGGATTGGGCGGATTA 30194 || | || || | | ||| || ||||| ||| ||| |||||| || || Sbjct 561 ATGCCAGATCAGTTATAGAGAAAGGCAAATACGTCAGA-AATAACAAATTGGGTGGTTTG 619 Query 30195 TTCGCTTGGGAAATTGACGCCGACAACGGCGATTTGTTAAATGCTATGAA 30244 ||||| |||||||||||||| ||||| || || | || ||||||||||| Sbjct 620 TTCGCGTGGGAAATTGACGCGGACAATGGTGACATATTGAATGCTATGAA 669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397675749920407