Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq15021 122 1e-22
seq67196 105 1e-17
>seq15021
Length=1916
Score = 122 bits (134), Expect = 1e-22
Identities = 166/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| |||||| ||||||| |||| || || || || || | || || || | ||
Sbjct 729 TGCAGATATTCGTAAAAACCCTAACGGGGAAGACCATCACCCTAGAGGTGGAGGCTTCCG 788
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| ||||| ||||||| ||| || || ||| |||||| || ||||| || |||||||
Sbjct 789 ACACTATAGAAAATGTGAAAGCCAAGATTCAAGATAAAGAGGGTATTCCTCCTGATCAAC 848
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| || | || ||||| ||||||||||| || || | || | | ||||| ||||
Sbjct 849 AACGATTGATCTTTGCTGGTAAACAATTGGAAGACGGCCGCACACTTTCTGATTACAATA 908
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATA 146263
| || |||||||| ||| | || || || ||| | | ||||||||||| ||
Sbjct 909 TTCAGAAAGAATCTACTCTTCACTTGGTGTTAAGGCTCAGAGGAGGTAATTA 960
>seq67196
Length=1848
Score = 105 bits (116), Expect = 1e-17
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || ||| | ||||| || || |||||||| || || | || || |||| | |
Sbjct 921 TGCAGATTTTCGTGAAAACTTTGACTGGAAAAACGATCACCTTGGAAGTCGAACCTTCAG 862
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
||||||| | || || ||| ||| || || |||||||| || || || ||||| |
Sbjct 861 ATACTATCGAGAACGTTAAAGCTAAGATTCAGGACAAAGAAGGTATCCCCCCAGATCAGC 802
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| | || |||||||| || || || || || || | || || ||||||| ||||
Sbjct 801 AGCGTCTGATTTTTGCTGGAAAGCAGTTGGAAGACGGCCGTACTTTGTCAGATTACAATA 742
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| ||||||||||| ||| | ||| | || ||||| | | |||||||
Sbjct 741 TTCAAAAAGAATCCACTTTACATCTTGTTCTACGACTTCGCGGAGGTA 694
Score = 89.7 bits (98), Expect = 8e-13
Identities = 148/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || || | ||||| || || || ||||| || ||| | || || || | |
Sbjct 465 TGCAGATCTTTGTTAAAACCTTGACTGGTAAAACTATCACTCTAGAAGTTGAGCCATCTG 406
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || ||| ||||||| ||| || || || ||| ||||| ||||| || |||||||
Sbjct 405 ACACCATTGAAAATGTCAAAGCCAAGATTCAGGATAAGGAAGGTATTCCGCCAGATCAAC 346
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | || || ||||| || ||||| | || ||| | || || | || |||||||
Sbjct 345 AACGTCTGATCTTTGCTGGAAAACAGCTTGAAGATGGCCGCACCCTATCTGACTATAATA 286
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245
| ||||||||||| || | ||| | || || ||
Sbjct 285 TCCAAAAAGAATCCACCCTTCATCTGGTTTTGCG 252
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 783738492133960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |