Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq131719 233 1e-56 seq67196 178 1e-39 seq15021 167 2e-36 seq193007 134 1e-26 >seq131719 Length=2163 Score = 233 bits (258), Expect = 1e-56 Identities = 349/491 (71%), Gaps = 6/491 (1%) Strand=Plus/Plus Query 45112 GCTTATTTCGTTGAATGGGGAGTGTATGGGCGCAATTTTCCTATGAACCGCGTGCCAGTG 45171 ||||| ||||| ||||||||||||||| | | || || || || |||||||||| | Sbjct 1560 GCTTACTTCGTAGAATGGGGAGTGTATCCGAGGAAGTTCCCCGTGGACCGCGTGCCGATC 1619 Query 45172 CCGAACCTTACGCATTTGTTATACGGTTTTATTCCTATATGCGGTGGCGATGGCATTAAT 45231 || || || || || ||||| ||||| || ||||| || ||||| ||||| ||||| || Sbjct 1620 CCCAATCTGACTCACTTGTTGTACGGGTTCATTCCGATCTGCGGAGGCGACGGCATCAAC 1679 Query 45232 GACAGTCTTAAAACGATTACAGGCAGTTTTGAAGCGTTGCAAAAATCGTGCGCCGGCCGC 45291 |||||||| || |||| |||||||| | || | || || ||| ||||||| Sbjct 1680 GACAGTCTGAAGGAGATTGAGGGCAGTTTCCAGGCACTCCAGCGTTCCTGCAGCGGCCGC 1739 Query 45292 TCAGATTTCAAAGTGAGCATTCACGACCCATGGGCCGCTGTGCAAAAACCACAAAAAGGC 45351 ||| ||||||||| |||||| ||||| ||||||||| | || ||||||||||| ||| Sbjct 1740 GAAGACTTCAAAGTGTCCATTCATGACCCCTGGGCCGCTCTTCAGAAACCACAAAAGGGC 1799 Query 45352 GTTTCTGCTTGGAACGAACCGTATAAAGGCAATTTTGGACAAATCATGGCTGTAAAACGG 45411 ||||| | ||||||||||| || ||||| || || || ||| | ||| | |||| | Sbjct 1800 CTTTCTTCATGGAACGAACCTTACAAAGGAAACTTCGGCCAACTGATGATGTTGAAACAG 1859 Query 45412 GCAAATCCTCATTTAAAAGTGTTGCCATCGATTGGCGGCTGGACGCTGTCCGATCCGTTT 45471 || | || | | || | ||||| || | ||||||||||| || | ||||| || Sbjct 1860 GCGAGACCAGACCTCAAGATTTTGCCTTCCGTCGGCGGCTGGACTTTGGCTGATCCATT- 1918 Query 45472 TACCATTTGCACGATGCGGAGA-AACGCG-CTTTGTTT-GTGGAATCCGTGCGCGAATTT 45528 | ||| | || ||| || ||| |||| || | ||||| || || Sbjct 1919 --CTTTTTCTTCACTGACAAGACAAAGCGTGACCGTTTCGTTGCTTCCGTAAAAGACTTC 1976 Query 45529 TTAACTACGTGGAAATTTTTTGACGGAGTCGATATAGATTGGGAGTTTCCCGGCGGCAAT 45588 | || |||||||| |||||||| |||||||| ||||||||||| || || || || Sbjct 1977 CTCCAGACCTGGAAATTCTTTGACGGCGTCGATATCGATTGGGAGTTCCCTGGAGGTAAA 2036 Query 45589 GGCGCCAATCC 45599 ||||| || || Sbjct 2037 GGCGCTAACCC 2047 >seq67196 Length=1848 Score = 178 bits (196), Expect = 1e-39 Identities = 171/217 (79%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| |||| |||||| |||||||||||||| || ||||| || | | |||||| Sbjct 251 ACGCAAAACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCAGATAGGGTGCGGCC 310 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || ||||| |||||| | |||| | ||| ||||| ||||||||||| || || Sbjct 311 ATCTTCAAGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGCGGAATACCTTCCTT 370 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 || || ||| || | ||||||| |||| | |||||||| | || ||||| ||||| | Sbjct 371 ATCCTG-AATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCAACTTCTAGAGTGA 429 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||||| ||||| |||||||||||||| |||||||| Sbjct 430 TAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 466 Score = 154 bits (170), Expect = 1e-32 Identities = 166/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 |||||| || | ||| | || |||||||| ||||| || || || | | |||||| Sbjct 23 ACGCAGTACAAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGATAGGGTGCGCCC 82 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || |||||||||||||| | |||| ||| ||||| || || || || ||||| || Sbjct 83 ATCTTCAAGTTGTTTGCCAGCGAAAATCAGTCTCTGCTGGTCTGGGGGGATCCCCTCCTT 142 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||||| ||| || | ||| ||| | || | |||||| || | ||||| || ||||| | Sbjct 143 ATCTTG-AATCTTGGCTTTTACATTCTCAATAGTGTCTGATGGCTCTACCTCTAGAGTAA 201 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||||| ||||| |||||||||||||| |||||||| Sbjct 202 TAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 238 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || |||||| || | ||| | || |||||||| ||||| || || || | Sbjct 468 CCACCACGCAGACGCAGTACTAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGAT 527 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || ||| || ||||||||||||||| | |||| ||| ||||| || || || Sbjct 528 AGGGTACGCCCATCTTCAAGTTGTTTGCCAGCAAAAATCATTCTCTGCTGGTCTGGGGGG 587 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || || ||||| |||||| | || || |||| | ||||| || | || || Sbjct 588 ATCCCTTCCTTATCTTG-AATTTTAGCCTTAACGTTTTCAATTGTGTCCGATGGCTCAAC 646 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||| || |||||||||||||| | |||||||||||| |||||||| Sbjct 647 TTCAAGTGTAATAGTTTTGCCAGTAAGGGTTTTAACAAAGATCTGCAT 694 Score = 109 bits (120), Expect = 4e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || || | ||| | ||||||||||||||||| || ||||| | | || || Sbjct 708 CGTAGAACAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGACAAAGTACGGCCG 767 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || | || || |||||| | |||| | |||||||| || || ||||| |||||| Sbjct 768 TCTTCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGGATACCTTCTTTG 827 Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || || ||| || | ||| || | || | ||| || ||| |||| ||||| | || || Sbjct 828 TCCTG-AATCTTAGCTTTAACGTTCTCGATAGTATCTGAAGGTTCGACTTCCAAGGTGAT 886 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||||| ||||| || ||||| || || ||||||||| Sbjct 887 CGTTTTTCCAGTCAAAGTTTTCACGAAAATCTGCATT 923 >seq15021 Length=1916 Score = 167 bits (184), Expect = 2e-36 Identities = 170/219 (78%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 29577 CACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATC 29636 |||||| ||||| || |||||||| ||||| || ||||| | || ||||| || || Sbjct 937 CACCAAGTGAAGAGTAGATTCTTTCTGAATATTGTAATCAGAAAGTGTGCGGCCGTCTTC 878 Query 29637 GAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTG 29696 | |||||| |||||| | ||||||| ||| ||||| || |||||||||||||| ||||| Sbjct 877 CAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCAGGAGGAATACCCTCTTTATCTTG 818 Query 29697 TAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTT 29755 ||| || | ||| ||| |||||| |||||| ||| || || || || || || || | Sbjct 817 -AATCTTGGCTTTCACATTTTCTATAGTGTCGGAAGCCTCCACCTCTAGGGTGATGGTCT 759 Query 29756 TGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAAAC 29794 | || |||| |||||| || |||||||||||| |||||| Sbjct 758 TCCCCGTTAGGGTTTTTACGAATATCTGCATTGTAAAAC 720 >seq193007 Length=659 Score = 134 bits (148), Expect = 1e-26 Identities = 161/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || ||||| || | || |||||||| || || || || || | | ||||| | Sbjct 416 CGGAGAACCAAGTGCAATGTAGATTCTTTCTGGATATTGTAGTCGGATAGTGTGCGTCCA 475 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || |||||||| |||||| | || | | || || || || |||||||| |||||| Sbjct 476 TCTTCAAGTTGTTTTCCAGCAAAGATAAGACGCTGTTGGTCTGGGGGAATACCTTCTTTG 535 Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| |||||| | ||||||| | || | |||||| || |||| ||||| | ||| || Sbjct 536 TCTTG-AATTTTGGCTTTGACATTCTCAATAGTGTCCGATGGTTCAACTTCTAAAGTGAT 594 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||||||||| | || || ||||| |||||||| Sbjct 595 AGTTTTGCCAGTAAGTGTCTTGACAAAGATCTGCAT 630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384059274050883