Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq131719 230 2e-55 seq193007 113 4e-20 seq67196 109 5e-19 seq15021 107 2e-18 >seq131719 Length=2163 Score = 230 bits (254), Expect = 2e-55 Identities = 356/503 (71%), Gaps = 4/503 (1%) Strand=Plus/Minus Query 19010 GCCGACGTTGGGGTTAGCGCCATTGCCGCCTGGAAACTCCCAATCAATATCGACGCCATC 19069 ||||| |||||||||||||| || || || || ||||||||||| ||||||||||| || Sbjct 2057 GCCGAGATTGGGGTTAGCGCCTTTACCTCCAGGGAACTCCCAATCGATATCGACGCCGTC 1998 Query 19070 GAAGAATTTCCACGTTTCTAGATACTCTTGGACTGAATCGAT-AAACGTCTGCCGTACGA 19128 ||||||||||| || | || | |||| || ||| | | ||||| | | | Sbjct 1997 AAAGAATTTCCAGGTCTGGAGGAAGTCTTTTACGGAAGCAACGAAACGGTCACGCTTTG- 1939 Query 19129 TCTTGTC-GTGCATATGGTAAAATGGGTCCGAAAGTGTCCAGCCCCCGATCGAAGGTAGC 19187 ||||||| ||| | | | ||||| || | | |||||||| |||| ||||| | Sbjct 1938 TCTTGTCAGTGAAGAAAA-AGAATGGATCAGCCAAAGTCCAGCCGCCGACGGAAGGCAAA 1880 Query 19188 ACTTTTAGATGAGGGTTCGCCAATTTGGCTGCCATAAGTTGGCCAAAGTTGCCTTTGTAC 19247 | || || | || ||||| ||| ||| |||||||| ||||| |||||||| Sbjct 1879 ATCTTGAGGTCTGGTCTCGCCTGTTTCAACATCATCAGTTGGCCGAAGTTTCCTTTGTAA 1820 Query 19248 GGTTCGTTCCATGCGCTGACACCTTTTTGGGGTTTCTGTATGGCCGCCCAAGGATCGTGA 19307 ||||||||||||| | || ||||| |||||||| | || ||||| || || ||| Sbjct 1819 GGTTCGTTCCATGAAGAAAGGCCCTTTTGTGGTTTCTGAAGAGCGGCCCAGGGGTCATGA 1760 Query 19308 ATGGCCACTTTGAAGTCGGCACGACCGGCACACGAACGTTGCAACGCTTCGAAACTGCCC 19367 |||| |||||||||||| | || ||| || ||||| || | || | |||||||||| Sbjct 1759 ATGGACACTTTGAAGTCTTCGCGGCCGCTGCAGGAACGCTGGAGTGCCTGGAAACTGCCC 1700 Query 19368 GGGACAGTTTTGAGGGCATCATTGATGCCGTCGCCACCGCACATGGGCACGAAACCGTAC 19427 | || || || |||||||||||||| ||||| || || | ||| |||||| Sbjct 1699 TCAATCTCCTTCAGACTGTCGTTGATGCCGTCGCCTCCGCAGATCGGAATGAACCCGTAC 1640 Query 19428 AACAAATGCGACAAGTTCGGTGTGGGCACTTTATCGACGGGAAACTGTCGCGGATACACA 19487 ||||| || | || || || | ||||| || ||||| |||| | ||||||||| Sbjct 1639 AACAAGTGAGTCAGATTGGGGATCGGCACGCGGTCCACGGGGAACTTCCTCGGATACACT 1580 Query 19488 CCCCATTCGACAAAGTATGCACC 19510 |||||||| || ||||| || || Sbjct 1579 CCCCATTCTACGAAGTAAGCTCC 1557 >seq193007 Length=659 Score = 113 bits (124), Expect = 4e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 137202 AACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTT 137260 ||| || || | |||||||||||| || || ||||| ||| | ||||| || | |||| Sbjct 421 AACCAAGTGCAATGTAGATTCTTTCTGGATATTGTAGTCGGATAGTGTGCGTCCA-TCTT 479 Query 137261 CGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGG 137320 | |||||||| |||||| |||| ||||| || || || || || || ||||||||||| Sbjct 480 CAAGTTGTTTTCCAGCAAAGATAAGACGCTGTTGGTCTGGGGGAATACCTTCTTTGTCTT 539 Query 137321 TAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCT 137380 |||||| ||| | | || | ||||| | ||||| ||||| | ||| | || | Sbjct 540 GAATTTTGGCTTTGACATTCTCAATAGTGTCCGATGGTTCAACTTCTAAAGTGATAGTTT 599 Query 137381 TGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 |||| || | ||| || || || || ||||| Sbjct 600 TGCCAGTAAGTGTCTTGACAAAGATCTGCAT 630 >seq67196 Length=1848 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | ||||||||| | ||||| || ||||||||||| || || || || Sbjct 240 CCACCACGGAGACGCAAAACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCAGAT 299 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | |||| ||||| || ||||| |||||| ||||||||||||| ||||| || || Sbjct 300 AGGGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGCGGA 359 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||| || || ||| || ||| | | ||| | ||||| | || || ||| Sbjct 360 ATACCTTCCTTATCCTGAATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCAACT 419 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || | ||| | || || || ||||| ||||| || || || |||||| Sbjct 420 TCTAGAGTGATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCATA 467 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 ||||| || | || | ||| | ||| | || ||||||||||| || |||||||| | Sbjct 696 CCTCCGCGAAGTCGTAGAACAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGAC 755 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || | |||||| | || || |||||| | |||||||| |||||||| || || Sbjct 756 AAAGTACGGCCGTCTTCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGG 815 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||||||||| ||| || ||| | | || | || |||| ||||| ||| Sbjct 816 ATACCTTCTTTGTCCTGAATCTTAGCTTTAACGTTCTCGATAGTATCTGAAGGTTCGACT 875 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | || | ||| || || ||||| ||||| ||||| || ||||| Sbjct 876 TCCAAGGTGATCGTTTTTCCAGTCAAAGTTTTCACGAAAATCTGCAT 922 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | ||||| || | ||| | ||||||||||| || || ||||| || Sbjct 12 CCACCACGGAGACGCAGTACAAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGAT 71 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | |||| | ||||| |||||||| ||||| | ||||| | ||||| || || || Sbjct 72 AGGGTGCGCCCATCTTCAAGTTGTTTGCCAGCGAAAATCAGTCTCTGCTGGTCTGGGGGG 131 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || || || || || ||| || ||||| | || | ||||||| || ||||| Sbjct 132 ATCCCCTCCTTATCTTGAATCTTGGCTTTTACATTCTCAATAGTGTCTGATGGCTCTACC 191 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || | ||| | || || || ||||| ||||| || || || |||||| Sbjct 192 TCTAGAGTAATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCATA 239 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | ||||| |||| ||| | ||||||||||| || || ||||| || Sbjct 468 CCACCACGCAGACGCAGTACTAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGAT 527 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || | | ||||| |||||||| |||||| | |||| | ||||| || || || Sbjct 528 AGGGTACGCCCATCTTCAAGTTGTTTGCCAGCAAAAATCATTCTCTGCTGGTCTGGGGGG 587 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||| || || |||||| || | | ||| | ||||| | || || ||| Sbjct 588 ATCCCTTCCTTATCTTGAATTTTAGCCTTAACGTTTTCAATTGTGTCCGATGGCTCAACT 647 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 137415 |||| || | || ||||| || | ||||| || || || |||||| || Sbjct 648 TCAAGTGTAATAGTTTTGCCAGTAAGGGTTTTAACAAAGATCTGCATACCT 698 >seq15021 Length=1916 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 137200 AAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCT 137259 || || || |||| ||||||||||| || || |||||||| | ||||| |||| Sbjct 939 AACACCAAGTGAAGAGTAGATTCTTTCTGAATATTGTAATCAGAAAGTGTGCGGCCGTCT 880 Query 137260 TCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 137319 || | ||||||||||||| |||||| ||||| ||||| ||||| || || ||||| || Sbjct 879 TCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCAGGAGGAATACCCTCTTTATCT 820 Query 137320 GTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTC 137379 ||| || ||| | | ||| | ||||| | | || || || | || | ||| Sbjct 819 TGAATCTTGGCTTTCACATTTTCTATAGTGTCGGAAGCCTCCACCTCTAGGGTGATGGTC 760 Query 137380 TTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || || || | |||||||||||||| ||||| Sbjct 759 TTCCCCGTTAGGGTTTTTACGAATATCTGCAT 728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 487035235671600