Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq131719 230 2e-55
seq193007 113 4e-20
seq67196 109 5e-19
seq15021 107 2e-18
>seq131719
Length=2163
Score = 230 bits (254), Expect = 2e-55
Identities = 356/503 (71%), Gaps = 4/503 (1%)
Strand=Plus/Minus
Query 19010 GCCGACGTTGGGGTTAGCGCCATTGCCGCCTGGAAACTCCCAATCAATATCGACGCCATC 19069
||||| |||||||||||||| || || || || ||||||||||| ||||||||||| ||
Sbjct 2057 GCCGAGATTGGGGTTAGCGCCTTTACCTCCAGGGAACTCCCAATCGATATCGACGCCGTC 1998
Query 19070 GAAGAATTTCCACGTTTCTAGATACTCTTGGACTGAATCGAT-AAACGTCTGCCGTACGA 19128
||||||||||| || | || | |||| || ||| | | ||||| | | |
Sbjct 1997 AAAGAATTTCCAGGTCTGGAGGAAGTCTTTTACGGAAGCAACGAAACGGTCACGCTTTG- 1939
Query 19129 TCTTGTC-GTGCATATGGTAAAATGGGTCCGAAAGTGTCCAGCCCCCGATCGAAGGTAGC 19187
||||||| ||| | | | ||||| || | | |||||||| |||| ||||| |
Sbjct 1938 TCTTGTCAGTGAAGAAAA-AGAATGGATCAGCCAAAGTCCAGCCGCCGACGGAAGGCAAA 1880
Query 19188 ACTTTTAGATGAGGGTTCGCCAATTTGGCTGCCATAAGTTGGCCAAAGTTGCCTTTGTAC 19247
| || || | || ||||| ||| ||| |||||||| ||||| ||||||||
Sbjct 1879 ATCTTGAGGTCTGGTCTCGCCTGTTTCAACATCATCAGTTGGCCGAAGTTTCCTTTGTAA 1820
Query 19248 GGTTCGTTCCATGCGCTGACACCTTTTTGGGGTTTCTGTATGGCCGCCCAAGGATCGTGA 19307
||||||||||||| | || ||||| |||||||| | || ||||| || || |||
Sbjct 1819 GGTTCGTTCCATGAAGAAAGGCCCTTTTGTGGTTTCTGAAGAGCGGCCCAGGGGTCATGA 1760
Query 19308 ATGGCCACTTTGAAGTCGGCACGACCGGCACACGAACGTTGCAACGCTTCGAAACTGCCC 19367
|||| |||||||||||| | || ||| || ||||| || | || | ||||||||||
Sbjct 1759 ATGGACACTTTGAAGTCTTCGCGGCCGCTGCAGGAACGCTGGAGTGCCTGGAAACTGCCC 1700
Query 19368 GGGACAGTTTTGAGGGCATCATTGATGCCGTCGCCACCGCACATGGGCACGAAACCGTAC 19427
| || || || |||||||||||||| ||||| || || | ||| ||||||
Sbjct 1699 TCAATCTCCTTCAGACTGTCGTTGATGCCGTCGCCTCCGCAGATCGGAATGAACCCGTAC 1640
Query 19428 AACAAATGCGACAAGTTCGGTGTGGGCACTTTATCGACGGGAAACTGTCGCGGATACACA 19487
||||| || | || || || | ||||| || ||||| |||| | |||||||||
Sbjct 1639 AACAAGTGAGTCAGATTGGGGATCGGCACGCGGTCCACGGGGAACTTCCTCGGATACACT 1580
Query 19488 CCCCATTCGACAAAGTATGCACC 19510
|||||||| || ||||| || ||
Sbjct 1579 CCCCATTCTACGAAGTAAGCTCC 1557
>seq193007
Length=659
Score = 113 bits (124), Expect = 4e-20
Identities = 153/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 137202 AACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTT 137260
||| || || | |||||||||||| || || ||||| ||| | ||||| || | ||||
Sbjct 421 AACCAAGTGCAATGTAGATTCTTTCTGGATATTGTAGTCGGATAGTGTGCGTCCA-TCTT 479
Query 137261 CGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGG 137320
| |||||||| |||||| |||| ||||| || || || || || || |||||||||||
Sbjct 480 CAAGTTGTTTTCCAGCAAAGATAAGACGCTGTTGGTCTGGGGGAATACCTTCTTTGTCTT 539
Query 137321 TAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCT 137380
|||||| ||| | | || | ||||| | ||||| ||||| | ||| | || |
Sbjct 540 GAATTTTGGCTTTGACATTCTCAATAGTGTCCGATGGTTCAACTTCTAAAGTGATAGTTT 599
Query 137381 TGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
|||| || | ||| || || || || |||||
Sbjct 600 TGCCAGTAAGTGTCTTGACAAAGATCTGCAT 630
>seq67196
Length=1848
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| || || | ||||||||| | ||||| || ||||||||||| || || || ||
Sbjct 240 CCACCACGGAGACGCAAAACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCAGAT 299
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| |||| ||||| || ||||| |||||| ||||||||||||| ||||| || ||
Sbjct 300 AGGGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGCGGA 359
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
|| ||||| || || ||| || ||| | | ||| | ||||| | || || |||
Sbjct 360 ATACCTTCCTTATCCTGAATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCAACT 419
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412
|| | ||| | || || || ||||| ||||| || || || ||||||
Sbjct 420 TCTAGAGTGATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCATA 467
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
||||| || | || | ||| | ||| | || ||||||||||| || |||||||| |
Sbjct 696 CCTCCGCGAAGTCGTAGAACAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGAC 755
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| || | |||||| | || || |||||| | |||||||| |||||||| || ||
Sbjct 756 AAAGTACGGCCGTCTTCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGG 815
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
|| ||||||||||| ||| || ||| | | || | || |||| ||||| |||
Sbjct 816 ATACCTTCTTTGTCCTGAATCTTAGCTTTAACGTTCTCGATAGTATCTGAAGGTTCGACT 875
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
|| | || | ||| || || ||||| ||||| ||||| || |||||
Sbjct 876 TCCAAGGTGATCGTTTTTCCAGTCAAAGTTTTCACGAAAATCTGCAT 922
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| || || | ||||| || | ||| | ||||||||||| || || ||||| ||
Sbjct 12 CCACCACGGAGACGCAGTACAAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGAT 71
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| |||| | ||||| |||||||| ||||| | ||||| | ||||| || || ||
Sbjct 72 AGGGTGCGCCCATCTTCAAGTTGTTTGCCAGCGAAAATCAGTCTCTGCTGGTCTGGGGGG 131
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
|| || || || || ||| || ||||| | || | ||||||| || |||||
Sbjct 132 ATCCCCTCCTTATCTTGAATCTTGGCTTTTACATTCTCAATAGTGTCTGATGGCTCTACC 191
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412
|| | ||| | || || || ||||| ||||| || || || ||||||
Sbjct 192 TCTAGAGTAATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCATA 239
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| || || | ||||| |||| ||| | ||||||||||| || || ||||| ||
Sbjct 468 CCACCACGCAGACGCAGTACTAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGAT 527
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| || | | ||||| |||||||| |||||| | |||| | ||||| || || ||
Sbjct 528 AGGGTACGCCCATCTTCAAGTTGTTTGCCAGCAAAAATCATTCTCTGCTGGTCTGGGGGG 587
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
|| ||||| || || |||||| || | | ||| | ||||| | || || |||
Sbjct 588 ATCCCTTCCTTATCTTGAATTTTAGCCTTAACGTTTTCAATTGTGTCCGATGGCTCAACT 647
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 137415
|||| || | || ||||| || | ||||| || || || |||||| ||
Sbjct 648 TCAAGTGTAATAGTTTTGCCAGTAAGGGTTTTAACAAAGATCTGCATACCT 698
>seq15021
Length=1916
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 137200 AAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCT 137259
|| || || |||| ||||||||||| || || |||||||| | ||||| ||||
Sbjct 939 AACACCAAGTGAAGAGTAGATTCTTTCTGAATATTGTAATCAGAAAGTGTGCGGCCGTCT 880
Query 137260 TCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 137319
|| | ||||||||||||| |||||| ||||| ||||| ||||| || || ||||| ||
Sbjct 879 TCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCAGGAGGAATACCCTCTTTATCT 820
Query 137320 GTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTC 137379
||| || ||| | | ||| | ||||| | | || || || | || | |||
Sbjct 819 TGAATCTTGGCTTTCACATTTTCTATAGTGTCGGAAGCCTCCACCTCTAGGGTGATGGTC 760
Query 137380 TTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
|| || || | |||||||||||||| |||||
Sbjct 759 TTCCCCGTTAGGGTTTTTACGAATATCTGCAT 728
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 487035235671600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |