Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq194283 95.1 2e-14 seq185573 86.0 8e-12 seq179140 86.0 8e-12 seq125389 86.0 8e-12 seq73244 86.0 8e-12 seq73243 86.0 8e-12 seq36867 86.0 8e-12 seq140729 82.4 1e-10 seq36871 82.4 1e-10 >seq194283 Length=5324 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 2290 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 2231 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 2230 CCCGCCGGGGAG 2219 Score = 93.3 bits (102), Expect = 5e-14 Identities = 67/76 (88%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 11729 GTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 ||||||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||| Sbjct 2291 GTCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 2232 Query 11788 CCCCGACGAGGAGGGA 11803 ||||| || |||| || Sbjct 2231 CCCCGCCGGGGAGTGA 2216 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||| Sbjct 2218 ACTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 2277 Query 139412 ATACTAACGAGGA 139424 |||||| |||||| Sbjct 2278 ATACTACCGAGGA 2290 >seq185573 Length=3752 Score = 86.0 bits (94), Expect = 8e-12 Identities = 61/69 (88%), Gaps = 1/69 (1%) Strand=Plus/Minus Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||| ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||| Sbjct 2201 AGTCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 2142 Query 11787 TCCCCGACG 11795 |||||| || Sbjct 2141 TCCCCGCCG 2133 Score = 86.0 bits (94), Expect = 8e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 || ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 2199 TCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 2140 Query 8718 CCCGACG 8724 |||| || Sbjct 2139 CCCGCCG 2133 >seq179140 Length=1801 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11725 CCCAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTC 11783 || |||| ||| ||||||||||||| |||| |||| ||||| | |||||||||||||||| Sbjct 1452 CCAAGTCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTC 1511 Query 11784 GATTCCCCGACG 11795 ||||||||| || Sbjct 1512 GATTCCCCGCCG 1523 Score = 86.0 bits (94), Expect = 8e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 || ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 1457 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1516 Query 8718 CCCGACG 8724 |||| || Sbjct 1517 CCCGCCG 1523 >seq125389 Length=1651 Score = 86.0 bits (94), Expect = 8e-12 Identities = 61/69 (88%), Gaps = 1/69 (1%) Strand=Plus/Plus Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||| ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||| Sbjct 1283 AGTCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 1342 Query 11787 TCCCCGACG 11795 |||||| || Sbjct 1343 TCCCCGCCG 1351 Score = 86.0 bits (94), Expect = 8e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 || ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 1285 TCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1344 Query 8718 CCCGACG 8724 |||| || Sbjct 1345 CCCGCCG 1351 >seq73244 Length=4644 Score = 86.0 bits (94), Expect = 8e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 || ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 543 TCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 602 Query 8718 CCCGACG 8724 |||| || Sbjct 603 CCCGCCG 609 Score = 82.4 bits (90), Expect = 1e-10 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 139358 CGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTATACTA 139417 || |||||| |||||||||||||||||| | |||| |||||||| | |||||||||||| Sbjct 609 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTA 550 Query 139418 ACGAGGATTT 139427 ||| ||||| Sbjct 549 CCGAAGATTT 540 Score = 82.4 bits (90), Expect = 1e-10 Identities = 59/67 (88%), Gaps = 1/67 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 || ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 543 TCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 602 Query 11789 CCCGACG 11795 |||| || Sbjct 603 CCCGCCG 609 >seq73243 Length=585 Score = 86.0 bits (94), Expect = 8e-12 Identities = 61/69 (88%), Gaps = 1/69 (1%) Strand=Plus/Plus Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||| ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||| Sbjct 106 AGTCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 165 Query 11787 TCCCCGACG 11795 |||||| || Sbjct 166 TCCCCGCCG 174 Score = 86.0 bits (94), Expect = 8e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 || ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 108 TCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 167 Query 8718 CCCGACG 8724 |||| || Sbjct 168 CCCGCCG 174 >seq36867 Length=10933 Score = 86.0 bits (94), Expect = 8e-12 Identities = 61/69 (88%), Gaps = 1/69 (1%) Strand=Plus/Minus Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||| ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||| Sbjct 9860 AGTCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 9801 Query 11787 TCCCCGACG 11795 |||||| || Sbjct 9800 TCCCCGCCG 9792 Score = 86.0 bits (94), Expect = 8e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 || ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 9858 TCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 9799 Query 8718 CCCGACG 8724 |||| || Sbjct 9798 CCCGCCG 9792 >seq140729 Length=3088 Score = 82.4 bits (90), Expect = 1e-10 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||| ||| |||||||||||| ||||| || | ||||| | ||||||||||||||||||| Sbjct 1047 AGTCTTCGGTAGTATAGTGGTCAGTATCCCAGCCTGTCACGCGGGAGACCGGGGTTCGAT 1106 Query 11787 TCCCCGACGAGGAGG 11801 |||||| || |||| Sbjct 1107 TCCCCGCCGGAGAGG 1121 >seq36871 Length=889 Score = 82.4 bits (90), Expect = 1e-10 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 8665 TAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACG 8724 |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| || Sbjct 588 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGCCG 529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 650828627564720