Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq168888 248 2e-60
seq28396 111 4e-19
seq153960 87.8 4e-12
>seq168888
Length=4095
Score = 248 bits (274), Expect = 2e-60
Identities = 455/656 (69%), Gaps = 17/656 (3%)
Strand=Plus/Plus
Query 110510 ACAATTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGA 110569
||||||| | ||||| |||||| ||| || || ||||| |||||||||||| |||||
Sbjct 1591 ACAATTGTCATCTTGTTTTCTTGTAGCTATGAAAGATGACAGTATTGAAGGTATATATGA 1650
Query 110570 TGCTCTTAAAGAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCA 110629
| || | ||| || ||| ||||| |||||| |||| ||||| || | ||||||||
Sbjct 1651 TACTTTAAAACAATGTGCGCTTATATCTAAATCTGCTGGTGGAATCGGAGTCCACGTTCA 1710
Query 110630 TGATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGT 110689
||| | | |||||| || |||||||| | || |||| || | ||||| ||
Sbjct 1711 CTGTATCAGAGCTAAAGGATCATATATCGCAGGCACAAATGGTGTATCTAACGGACTCGT 1770
Query 110690 TCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAA 110749
|||||| | || || | |||| |||| |||| |||||| |||||||||| || | |
Sbjct 1771 GCCAATGCTTAGGGTTTACAACAACACAGCAAGATATGTAGATCAAGGTGGAAATAAACG 1830
Query 110750 T---GGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGA 110806
|| | ||||| | ||| | || ||||||||| |||| || |||||||| | ||
Sbjct 1831 CCCCGGAGCTTTTGCAGTGTATTTAGAGCCTTGGCATGCAGACATTTTTGAATTTCTCGA 1890
Query 110807 ACTTCGTAAAAATCAA-GGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGT 110865
|| | ||| | || || |||||| | |||| || || || |||||||| | |
Sbjct 1891 CCT-CAAAAAGAACACTGGCAAAGAAGAAGTACGAGCTCGAGAGTTGTTTTATGCTTTAT 1949
Query 110866 GGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTC 110925
|||| | ||| | || |||||| | ||| || |||||| ||| |||||||||||
Sbjct 1950 GGATACCGGATCTTTTTATGAAAAGAGTTGAAAAAAATGAAGACTGGAGTCTTATGTGTC 2009
Query 110926 CTCATCGTTCTCCTGGTCTATCTGA-TGTATATGGAAAAGAGTTTGAAGACCTTTACGAA 110984
||||| || |||||| || |||| ||| | ||| | || || ||| | || || |||
Sbjct 2010 CTCATGATTGTCCTGGATTAGCTGACTGT-TGGGGAGATGAATTCGAAAATCTATATGAA 2068
Query 110985 AAATATGAAAAAGAAG-GCAAGTTTCGC-AAACAAATTCCAGCTCAAGAACTTTGGTT-- 111040
|||| ||||||||| || |||| | ||||| | || |||| | |||
Sbjct 2069 CAATACGAAAAAGAAAAGC--GTTTTGTGAAACAGGTCAGCGCCCAAGTTTTATGGAAAG 2126
Query 111041 -CAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATA 111099
|| |||| ||| | ||||||||||| ||||| || ||||| | || ||||| |
Sbjct 2127 CCATAATC---GAAGCCCAAGTTGAAACGGGAACACCCTATATGCTTTACAAAGACGCTT 2183
Query 111100 TTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGC 111155
||| | ||| ||| |||| ||| ||||| || || || | |||||| || |||
Sbjct 2184 GTAACAGGAAAAGTAACCAAAAGAACTTAGGCACTATAAAATGTAGTAACTTATGC 2239
>seq28396
Length=4796
Score = 111 bits (122), Expect = 4e-19
Identities = 135/183 (74%), Gaps = 6/183 (3%)
Strand=Plus/Minus
Query 305330 GTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAA 305389
||| | |||||| | ||||| | || ||||||||| |||||||| ||||| ||| |||
Sbjct 4089 GTTATATTCAATCGTCAACCTACTCTACATAAAATGAGTATGATGGGTCATAGAGTAAAA 4030
Query 305390 GTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCT---TATAATGCG 305446
||| | || | | ||||| ||| | ||| | || ||||| || || |||||
Sbjct 4029 GTACTGCCTTGGTCAACATTCCGAATGAATTTGAGC---TGTACATCTCCATACAATGCT 3973
Query 305447 GATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCAAAGGTTACAATGACTGAA 305506
||||||||||||||||||||||| ||||||| || ||||| | || || | | |||||
Sbjct 3972 GATTTTGATGGAGATGAAATGAACTTGCATGTCCCGCAATCCATGGAAACTAGGGCTGAA 3913
Query 305507 TTA 305509
||
Sbjct 3912 GTA 3910
>seq153960
Length=3310
Score = 87.8 bits (96), Expect = 4e-12
Identities = 206/303 (68%), Gaps = 20/303 (7%)
Strand=Plus/Minus
Query 279353 TTACGATATGGTAAAATTATTATTTTGACAGACCAAGATTTAGATGGAAGTCACATTAAA 279412
||||| ||||||||| |||| || || | || |||||| || ||| ||||||||||
Sbjct 1613 TTACGGTATGGTAAAGTTATGATAATGGCTGATCAAGATCAGGACGGATCTCACATTAAA 1554
Query 279413 GGATTAATACTTAATTGGGTTGAT-ACTTTCTGGCCAGAATTGTTGAA--TCAAAATTTT 279469
|| || || | |||| ||| || || | |||||||| || ||||| | | ||||
Sbjct 1553 GGGTTGATTATCAATTTCGTTCATCACAAT-TGGCCAGAGTTATTGAAACTGCCATTTTT 1495
Query 279470 GTAAGTGTGTTTCAAACACCAATTATTAAGGCAACTAAAGGTAAAAAAGAAGAAGTA--- 279526
| ||| | || ||||| ||| |||| ||||||||| ||| | |||| ||
Sbjct 1494 GGAAGAATTCATC--ACACCCATTGTTAAAGCAACTAAA---AAAGACAAAGAGATATCT 1440
Query 279527 TTTTATTCATTGCAGAAGTTTGAACAATG---GAAAGATTCAGTTGAGAATTCAGC-CTC 279582
||||| ||||| | | ||||| |||| ||| ||| ||| || ||| | | |
Sbjct 1439 TTTTACTCATTACCTGAATTTGAGGAATGGAAGAAGGATACAG----AAAATCATCACAC 1384
Query 279583 ATTCCATACCAAGTATTTTAAAGGTTTAGCAACATCCAATACTAAGGAAGCAAAAGAATA 279642
| | ||| ||| || | |||||||| | || |||| | || || || ||||||||
Sbjct 1383 TTACAATATCAAATACTACAAAGGTTTGGGTACTTCCACATCCAAAGAGGCTAAAGAATA 1324
Query 279643 TTT 279645
|||
Sbjct 1323 TTT 1321
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1183055950386543
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |