Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq168888 248 2e-60 seq28396 111 4e-19 seq153960 87.8 4e-12 >seq168888 Length=4095 Score = 248 bits (274), Expect = 2e-60 Identities = 455/656 (69%), Gaps = 17/656 (3%) Strand=Plus/Plus Query 110510 ACAATTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGA 110569 ||||||| | ||||| |||||| ||| || || ||||| |||||||||||| ||||| Sbjct 1591 ACAATTGTCATCTTGTTTTCTTGTAGCTATGAAAGATGACAGTATTGAAGGTATATATGA 1650 Query 110570 TGCTCTTAAAGAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCA 110629 | || | ||| || ||| ||||| |||||| |||| ||||| || | |||||||| Sbjct 1651 TACTTTAAAACAATGTGCGCTTATATCTAAATCTGCTGGTGGAATCGGAGTCCACGTTCA 1710 Query 110630 TGATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGT 110689 ||| | | |||||| || |||||||| | || |||| || | ||||| || Sbjct 1711 CTGTATCAGAGCTAAAGGATCATATATCGCAGGCACAAATGGTGTATCTAACGGACTCGT 1770 Query 110690 TCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAA 110749 |||||| | || || | |||| |||| |||| |||||| |||||||||| || | | Sbjct 1771 GCCAATGCTTAGGGTTTACAACAACACAGCAAGATATGTAGATCAAGGTGGAAATAAACG 1830 Query 110750 T---GGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGA 110806 || | ||||| | ||| | || ||||||||| |||| || |||||||| | || Sbjct 1831 CCCCGGAGCTTTTGCAGTGTATTTAGAGCCTTGGCATGCAGACATTTTTGAATTTCTCGA 1890 Query 110807 ACTTCGTAAAAATCAA-GGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGT 110865 || | ||| | || || |||||| | |||| || || || |||||||| | | Sbjct 1891 CCT-CAAAAAGAACACTGGCAAAGAAGAAGTACGAGCTCGAGAGTTGTTTTATGCTTTAT 1949 Query 110866 GGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTC 110925 |||| | ||| | || |||||| | ||| || |||||| ||| ||||||||||| Sbjct 1950 GGATACCGGATCTTTTTATGAAAAGAGTTGAAAAAAATGAAGACTGGAGTCTTATGTGTC 2009 Query 110926 CTCATCGTTCTCCTGGTCTATCTGA-TGTATATGGAAAAGAGTTTGAAGACCTTTACGAA 110984 ||||| || |||||| || |||| ||| | ||| | || || ||| | || || ||| Sbjct 2010 CTCATGATTGTCCTGGATTAGCTGACTGT-TGGGGAGATGAATTCGAAAATCTATATGAA 2068 Query 110985 AAATATGAAAAAGAAG-GCAAGTTTCGC-AAACAAATTCCAGCTCAAGAACTTTGGTT-- 111040 |||| ||||||||| || |||| | ||||| | || |||| | ||| Sbjct 2069 CAATACGAAAAAGAAAAGC--GTTTTGTGAAACAGGTCAGCGCCCAAGTTTTATGGAAAG 2126 Query 111041 -CAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATA 111099 || |||| ||| | ||||||||||| ||||| || ||||| | || ||||| | Sbjct 2127 CCATAATC---GAAGCCCAAGTTGAAACGGGAACACCCTATATGCTTTACAAAGACGCTT 2183 Query 111100 TTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGC 111155 ||| | ||| ||| |||| ||| ||||| || || || | |||||| || ||| Sbjct 2184 GTAACAGGAAAAGTAACCAAAAGAACTTAGGCACTATAAAATGTAGTAACTTATGC 2239 >seq28396 Length=4796 Score = 111 bits (122), Expect = 4e-19 Identities = 135/183 (74%), Gaps = 6/183 (3%) Strand=Plus/Minus Query 305330 GTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAA 305389 ||| | |||||| | ||||| | || ||||||||| |||||||| ||||| ||| ||| Sbjct 4089 GTTATATTCAATCGTCAACCTACTCTACATAAAATGAGTATGATGGGTCATAGAGTAAAA 4030 Query 305390 GTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCT---TATAATGCG 305446 ||| | || | | ||||| ||| | ||| | || ||||| || || ||||| Sbjct 4029 GTACTGCCTTGGTCAACATTCCGAATGAATTTGAGC---TGTACATCTCCATACAATGCT 3973 Query 305447 GATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCAAAGGTTACAATGACTGAA 305506 ||||||||||||||||||||||| ||||||| || ||||| | || || | | ||||| Sbjct 3972 GATTTTGATGGAGATGAAATGAACTTGCATGTCCCGCAATCCATGGAAACTAGGGCTGAA 3913 Query 305507 TTA 305509 || Sbjct 3912 GTA 3910 >seq153960 Length=3310 Score = 87.8 bits (96), Expect = 4e-12 Identities = 206/303 (68%), Gaps = 20/303 (7%) Strand=Plus/Minus Query 279353 TTACGATATGGTAAAATTATTATTTTGACAGACCAAGATTTAGATGGAAGTCACATTAAA 279412 ||||| ||||||||| |||| || || | || |||||| || ||| |||||||||| Sbjct 1613 TTACGGTATGGTAAAGTTATGATAATGGCTGATCAAGATCAGGACGGATCTCACATTAAA 1554 Query 279413 GGATTAATACTTAATTGGGTTGAT-ACTTTCTGGCCAGAATTGTTGAA--TCAAAATTTT 279469 || || || | |||| ||| || || | |||||||| || ||||| | | |||| Sbjct 1553 GGGTTGATTATCAATTTCGTTCATCACAAT-TGGCCAGAGTTATTGAAACTGCCATTTTT 1495 Query 279470 GTAAGTGTGTTTCAAACACCAATTATTAAGGCAACTAAAGGTAAAAAAGAAGAAGTA--- 279526 | ||| | || ||||| ||| |||| ||||||||| ||| | |||| || Sbjct 1494 GGAAGAATTCATC--ACACCCATTGTTAAAGCAACTAAA---AAAGACAAAGAGATATCT 1440 Query 279527 TTTTATTCATTGCAGAAGTTTGAACAATG---GAAAGATTCAGTTGAGAATTCAGC-CTC 279582 ||||| ||||| | | ||||| |||| ||| ||| ||| || ||| | | | Sbjct 1439 TTTTACTCATTACCTGAATTTGAGGAATGGAAGAAGGATACAG----AAAATCATCACAC 1384 Query 279583 ATTCCATACCAAGTATTTTAAAGGTTTAGCAACATCCAATACTAAGGAAGCAAAAGAATA 279642 | | ||| ||| || | |||||||| | || |||| | || || || |||||||| Sbjct 1383 TTACAATATCAAATACTACAAAGGTTTGGGTACTTCCACATCCAAAGAGGCTAAAGAATA 1324 Query 279643 TTT 279645 ||| Sbjct 1323 TTT 1321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1183055950386543