Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq15021 132 3e-26 seq67196 122 6e-23 seq193007 114 8e-21 >seq15021 Length=1916 Score = 132 bits (146), Expect = 3e-26 Identities = 179/247 (72%), Gaps = 2/247 (1%) Strand=Plus/Minus Query 33507 ACAAATAAAATCGTCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTG 33566 |||||| ||| | ||| ||||| | | ||||||||| || ||||| ||||| || Sbjct 970 ACAAATGTAATAATTACCTCCTCTGAGCCTTAACACCAAGTGAAGAGTAGATTCTTTCTG 911 Query 33567 TATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACG 33626 || |||||||| || |||||||| |||| ||||||||||| || ||||| ||||| || Sbjct 910 AATATTGTAATCAGAAAGTGTGCGGCCGTCTTCCAATTGTTTACCAGCAAAGATCAATCG 851 Query 33627 CTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGG 33685 || ||||| | || | ||| ||||| || ||| || |||| |||| || | | Sbjct 850 TTGTTGATCAGGAGGAATACCCTCTTTATCTTGAATCTTGGCTTTC-ACATTTTCTATAG 792 Query 33686 TGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCT 33745 ||||| | ||||| || | ||||| || || || |||| |||||||| || |||| Sbjct 791 TGTCGGAAGCCTCCACCTCTAGGGTGATGGTCTTCCCCGTTAGGGTTTTTACGAATATCT 732 Query 33746 GCATAGT 33752 |||| || Sbjct 731 GCATTGT 725 >seq67196 Length=1848 Score = 122 bits (134), Expect = 6e-23 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 33535 CGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCG 33594 |||| || | ||||| |||| |||||||| || |||||||| || | || || || Sbjct 708 CGTAGAACAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGACAAAGTACGGCCG 767 Query 33595 TCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTG 33654 || ||||| || ||||| |||||||||| ||||||||||||| | || | |||||||||| Sbjct 768 TCTTCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGGATACCTTCTTTG 827 Query 33655 TCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGAT 33713 || ||| || | || ||| | || | || || | ||| || || | ||||| Sbjct 828 TCCTGAATCTT-AGCTTTAACGTTCTCGATAGTATCTGAAGGTTCGACTTCCAAGGTGAT 886 Query 33714 CGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||||| || || || ||||| || || |||||||| Sbjct 887 CGTTTTTCCAGTCAAAGTTTTCACGAAAATCTGCAT 922 Score = 120 bits (132), Expect = 2e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| || |||| ||| || ||| |||||||| || || || || || Sbjct 239 ACCACCACGGAGACGCAAAACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCAGA 298 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || || | |||||||| ||||| |||| ||| || |||||| |||| Sbjct 299 TAGGGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGCGG 358 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCA 33700 | |||||| || || ||| || ||| | ||| ||| |||||| || || | Sbjct 359 AATACCTTCCTTATCCTGAATCTTGGCTTTGA-CATTTTCAATGGTGTCAGATGGCTCAA 417 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| |||||||| || || ||||| ||||||||||||||| Sbjct 418 CTTCTAGAGTGATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCATA 467 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||| | || | ||| | ||| ||||| || || ||||| || || Sbjct 467 ACCACCACGCAGACGCAGTACTAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGA 526 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || | || || | |||||| || |||||||||| | |||||| ||| | || Sbjct 527 TAGGGTACGCCCATCTTCAAGTTGTTTGCCAGCAAAAATCATTCTCTGCTGGTCTGGGGG 586 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCA 33700 | ||||| || || |||||| || ||| | ||| ||||| || || | Sbjct 587 GATCCCTTCCTTATCTTGAATTTTAGCCTT-AACGTTTTCAATTGTGTCCGATGGCTCAA 645 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| || || ||||| || || | ||||| ||||||||||||||| Sbjct 646 CTTCAAGTGTAATAGTTTTGCCAGTAAGGGTTTTAACAAAGATCTGCATA 695 >seq193007 Length=659 Score = 114 bits (126), Expect = 8e-21 Identities = 142/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 ||||| || || ||||| ||||| ||||||||| | || || | ||||||||| ||||| Sbjct 440 TCTTTCTGGATATTGTAGTCGGATAGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCAAAG 499 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 || | |||||| || ||| | || | |||||||||||| |||||| | || |||| Sbjct 500 ATAAGACGCTGTTGGTCTGGGGGAATACCTTCTTTGTCTTGAATTTT-GGCTTTGACATT 558 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 || | ||||| || ||| || || | ||||| ||||| || || | || || || Sbjct 559 CTCAATAGTGTCCGATGGTTCAACTTCTAAAGTGATAGTTTTGCCAGTAAGTGTCTTGAC 618 Query 33738 AAAGATCTGCAT 33749 |||||||||||| Sbjct 619 AAAGATCTGCAT 630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 327714245856960