Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq67196 118 2e-21 seq15021 95.1 3e-14 >seq67196 Length=1848 Score = 118 bits (130), Expect = 2e-21 Identities = 152/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGA-ATC 206243 ||||| | || |||||||||||||| |||||||| ||| ||| || || |||| | | Sbjct 907 AAAACTTTGACTGGAAAAACGATCACCTTGGAAGTCGAACCTTCAGATACTATCGAGAAC 848 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 |||||| || |||||| || |||||||| || || || || | || || || Sbjct 847 GTTAAAGCTAA-GATTCAGGACAAAGAAGGTATCCCCCCAGATCAGCAGCGTCTGATTTT 789 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || ||||||||||||||||| || | |||||| | |||||||| | || ||||| || Sbjct 788 TGCTGGAAAGCAGTTGGAAGACGGCCGTACTTTGTCAGATTACAATATTCAAAAAGAATC 729 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390 ||| | || |||||| | ||||||| Sbjct 728 CACTTTACATCTTGTTCTACGACTTCG 702 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 || || | |||||| || ||||| || || ||||| |||| ||||||||||| | || Sbjct 246 CGGAGACGCAAAACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCAGATAGGGTG 305 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | |||||||| ||||| ||||| || ||||| || ||||||||| Sbjct 306 CGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAGACGTTGTTGA 350 >seq15021 Length=1916 Score = 95.1 bits (104), Expect = 3e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 |||||||| ||||| || || || || || ||||| | || ||||| ||| ||| Sbjct 731 CAGATATTCGTAAAAACCCTAACGGGGAAGACCATCACCCTAGAGGTGGAGGCTTCCGAC 790 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| || ||||| || ||||||||| ||||| || ||| || || || Sbjct 791 ACTATAGAAAATGTGAAAGCCAA-GATTCAAGATAAAGAGGGTATTCCTCCTGATCAACA 849 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | || | ||||| || || || || |||||||| || | || | | |||||||| | Sbjct 850 ACGATTGATCTTTGCTGGTAAACAATTGGAAGACGGCCGCACACTTTCTGATTACAATAT 909 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 |||||||| |||||||||||| | || || || || Sbjct 910 TCAGAAAGAATCTACTCTTCACTTGGTGTTAAGGCT 945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178079752536023