Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq131719 264 1e-65
seq168888 129 6e-25
seq67196 118 1e-21
seq193007 96.9 3e-15
>seq131719
Length=2163
Score = 264 bits (292), Expect = 1e-65
Identities = 358/499 (72%), Gaps = 0/499 (0%)
Strand=Plus/Plus
Query 24829 GCTTACTTCGTCGAGTGGGGCGTGTATCAGCGGCAGTTTTCCGTCGACAAAGTGCCCGCG 24888
||||||||||| || ||||| ||||||| | || |||| |||| ||| |||||
Sbjct 1560 GCTTACTTCGTAGAATGGGGAGTGTATCCGAGGAAGTTCCCCGTGGACCGCGTGCCGATC 1619
Query 24889 CCCAATTTGTCGCACTTGCTATACGCTTTCGTGCCGATATGCGGCGGCGAGGGCATAAAC 24948
|||||| || | |||||| | |||| ||| | ||||| ||||| ||||| ||||| |||
Sbjct 1620 CCCAATCTGACTCACTTGTTGTACGGGTTCATTCCGATCTGCGGAGGCGACGGCATCAAC 1679
Query 24949 GACGCTCTCAAAACAGTTCCCGGTAGTTTTGAGGCGCTGCAGCGCTCGTGCGCCGGGCGC 25008
||| ||| || || || ||||| |||| || ||||| || ||| ||| |||
Sbjct 1680 GACAGTCTGAAGGAGATTGAGGGCAGTTTCCAGGCACTCCAGCGTTCCTGCAGCGGCCGC 1739
Query 25009 GACGATTTTAAGGTAACCATTCACGACCCCTGGGCCGCCATCCAGAAACCGCAGAAAGGC 25068
|| || || || || ||||||| |||||||||||||| | |||||||| || || |||
Sbjct 1740 GAAGACTTCAAAGTGTCCATTCATGACCCCTGGGCCGCTCTTCAGAAACCACAAAAGGGC 1799
Query 25069 GTCTCCACTTGGAACGAGCCGTACAAAGGCAACTTTGGACAATTAATGGGCCTGAAATTA 25128
| || | |||||||| || |||||||| ||||| || ||| | ||| |||||
Sbjct 1800 CTTTCTTCATGGAACGAACCTTACAAAGGAAACTTCGGCCAACTGATGATGTTGAAACAG 1859
Query 25129 GCTAATCCACACTTGAAGGTGCTGGCGTCGATCGGCGGCTGGACCTTGTCAGATCCATTC 25188
|| | ||| || | ||| | || | || ||||||||||||| ||| | |||||||||
Sbjct 1860 GCGAGACCAGACCTCAAGATTTTGCCTTCCGTCGGCGGCTGGACTTTGGCTGATCCATTC 1919
Query 25189 TTTCACATGCATGACGCGACCGTGCGTCAAACGTTCATCGATTCCGTCGAGGACTTTCTC 25248
||| | | |||| ||| |||| | ||| | | |||||| | ||||| |||
Sbjct 1920 TTTTTCTTCACTGACAAGACAAAGCGTGACCGTTTCGTTGCTTCCGTAAAAGACTTCCTC 1979
Query 25249 TTGACTTGGAAGTTTTTCGACGGCGTCGACATTGACTGGGAGTTTCCGGGCGGCAAAGGG 25308
||| ||||| || || ||||||||||| || || |||||||| || || || |||||
Sbjct 1980 CAGACCTGGAAATTCTTTGACGGCGTCGATATCGATTGGGAGTTCCCTGGAGGTAAAGGC 2039
Query 25309 GCCAATCCTCACGTCGGCA 25327
|| || || | ||||||
Sbjct 2040 GCTAACCCCAATCTCGGCA 2058
>seq168888
Length=4095
Score = 129 bits (142), Expect = 6e-25
Identities = 679/1066 (64%), Gaps = 25/1066 (2%)
Strand=Plus/Minus
Query 146572 GCCGCAGGTTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCACATCGCCACGAGTGA 146631
|| || || ||||| | ||||||||||||||| ||||| || || | ||| | | |
Sbjct 3186 GCAGCTGGCTTTGTTCTCAAATAATACATGCCGGTTTTAAGACCCATTTTCCAAGCATAA 3127
Query 146632 TTGTGAATCGAAGTCATGATGGCGTACGTCGGCTCCGCCACGAAAAGATTAAACGATTGG 146691
||||||||| || | | |||| | || || || || || ||||| || ||
Sbjct 3126 AAGTGAATCGATGTTAATTTACCGTAATTTGGTTCAGCTACATGAATGTTAAAAGACTGA 3067
Query 146692 CTTTGATCTATGAAAGCGTTGCGGTCGGCCGCCATCTCAATCATGCGTTTTGTCTT-CAT 146750
||||| || || || || | ||||| ||||| | ||| | ||||| | ||
Sbjct 3066 CTTTGGTCAATAAATGCACCCCTATCGGCAGCCATTTGAATTGTA-GTTTTAACAGACAC 3008
Query 146751 TTCCCAAGCGGTTTTGTACAGCCC-CTTAACGCTATCTGGAATACCTTCAATGTTTTGAA 146809
|||||| | || || || || | |||| || || |||||| |||| || ||||| |
Sbjct 3007 CTCCCAAACAGTCTTATATAGATCTCTTATTTCTTTC-GGAATAGCTTCTATATTTTGTA 2949
Query 146810 TAGAGCCCTTGT-GCGCAAAAATAG-TGTTTCGTATTTCGGGCGTGTAAA---GGTTTAG 146864
| || || || | | | | | || | |||| | | | | ||| | || ||
Sbjct 2948 TTGACCCATTATTGTGTATTATAAGATTTTTCATGTCTTCATCCCACAAATCTGCTTCAG 2889
Query 146865 TTTAATGAGGTCATCAATTAAATACTGATTGACCACTTGAAACTCGCCCGCCAGCACACG 146924
|| ||| | | |||| |||| ||||| || ||||| |||||||| | || || |
Sbjct 2888 TTAAATCACG----CAAT-AAATGATGATTTACAACTTGGAACTCGCCAGACAAAACTCT 2834
Query 146925 TCTGAGATACACATTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGC 146984
||| | || | ||| |||||||| ||||| || ||||| || || | ||||| ||
Sbjct 2833 TCTTTGGTATATATTTGATGTGAAAGGTTCAAATGATTCATTGTTACCAAGAATTTGAGC 2774
Query 146985 CGTGGTTGCGGTAGGCATGTACGCCACCAACAATGAATTTCGCAGACCGTACGCACGGAT 147044
||||| ||| || ||||| || | || || ||||||| || ||| | | | ||
Sbjct 2773 CGTGGATGCTGTTGGCATAGGAGCTAATAATAAAGAATTTCTCAAACCATGCTTAGAAAT 2714
Query 147045 GTTGTCCTTCAAAGTTTGCCAGTCCCACA--TCGACGAGGGCGTCACGTTCCACATGTCG 147102
| || || |||| | ||||| ||| | ||| | ||| || | |||||||||||
Sbjct 2713 TCTTTCTTTTAAAGCATCCCAGTTCCAAAGGTCG--GTGGGGGTTTTGCTCCACATGTCG 2656
Query 147103 TACTGGAGCACTCCTCGACTGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGC 147162
|| || | | ||| |||||| || || || || | || || || |
Sbjct 2655 TATTGTAATATACCTTGACTGGATGGGCTTCCTTCGTAAGTGTCATAAACCCCATACTTT 2596
Query 147163 TGCGCCAATTCACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTG 147222
| || | |||||| || || || || || || || || |||||||| |||||||
Sbjct 2595 TCTGCAAGTTCACAACTAGCTTCTAGTGCCCCGTAATAAATGGTTTCAAATATTTGTTGA 2536
Query 147223 TTTAGGACGGTCGCTTCTTCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCC 147282
|| || ||||| | || || || || | || |||| | ||||| | ||| ||
Sbjct 2535 TTAAGTTTCATCGCTGCATCACTTTCATATGCAATGCGCATCAAGACAAATGTATCTGCT 2476
Query 147283 AAACCCTGGATACCGACGCCGATAGGTCGATG-CTTTTCGTTGCTGCGCTTCGCGCTCGC 147341
| || || | ||| | || ||||| | ||| || | ||| | ||| || ||
Sbjct 2475 AGCCCTTGAACACCAATTCCTATAGGCCTATGCCTCATATTTGATTTTCTT-GCCTCCGG 2417
Query 147342 TATGGGATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTAT 147401
|| |||||| || |||||| || || || | ||| | | || ||| || |
Sbjct 2416 GATCGGATAGAAATTAACATCAATGATTTTATTTAAGTTTTGAGTAATAATTTTGGTGAC 2357
Query 147402 TGTTTTGAGTTTCTCGAAATCATAAGTCCCGTCTTCGACACGTACGCATTGGTTCACGGC 147461
| ||| | ||| | |||| ||| || |||| || || | ||||| ||
Sbjct 2356 TTCTTTTAATTTATTAAAATTATATGTTTTATCTT---CATTAACAAACATGTTCAAAGC 2300
Query 147462 GATAGACGCCAGATTGCAGACGGCCGTCTCTTCGGC-GTCGCTGTACTGCACGATTTCGG 147520
||||| || | ||| || || || || || || | || |||| | ||||| || |
Sbjct 2299 AATAGATGCTAAATTACACACCGCGACTTCGTCAGCTGACG-TGTATTCAACGATCTCAG 2241
Query 147521 CGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACG 147580
||| | ||| || |||||||| || || || | || || ||||||| || || |
Sbjct 2240 TGCATAAGTTACTACATTTTATAGTGCCTAAGTTCTTTTGGTTACTTTTCCTGTTACAAG 2181
Query 147581 CGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTC 147626
|||||||| | ||||| || ||| || || || ||||| | |||
Sbjct 2180 CGTCTTTGTAAAGCATATAGGGTGTTCCCGTTTCAACTTGGGCTTC 2135
>seq67196
Length=1848
Score = 118 bits (130), Expect = 1e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||||||||| ||| | | | || |||||||| || || ||||| | ||| || |
Sbjct 252 CGCAAAACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCAGATAGGGTGCGGCCA 311
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| |||||||| || | | |||| ||||| ||||||||||| || || ||||| |||
Sbjct 312 TCTTCAAGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGCGGAATACCTTCCTTA 371
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||| || ||| | | ||| | || || | ||||| ||||| | || |
Sbjct 372 TCCTGAATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCAACTTCTAGAGTGATA 431
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||||||||||| ||||| | || ||||||||
Sbjct 432 GTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 466
Score = 109 bits (120), Expect = 5e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973
||| | ||||| | || ||||||||||| ||||| || || ||||| |||||
Sbjct 713 AACAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGACAAAGTACGGCCGTCTTC 772
Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033
| ||| || || | | | || |||||||| |||||||| || || |||||||| ||
Sbjct 773 CAACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGGATACCTTCTTTGTCCTG 832
Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093
||| || ||| | | || | |||||| | || || ||||| | || | ||||||
Sbjct 833 AATCTTAGCTTTAACGTTCTCGATAGTATCTGAAGGTTCGACTTCCAAGGTGATCGTTTT 892
Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||||| |||||| | ||||||||||||
Sbjct 893 TCCAGTCAAAGTTTTCACGAAAATCTGCAT 922
>seq193007
Length=659
Score = 96.9 bits (106), Expect = 3e-15
Identities = 155/223 (70%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||| | ||| | |||||| || | | || ||||| || || ||||||||| | ||
Sbjct 409 ACGGAGGCGGAGAACCAAGTGCAATGTAGATTCTTTCTGGATATTGTAGTCGGATAGTGT 468
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| |||||| || ||||| || | | |||| ||||||||||| ||||| || || ||
Sbjct 469 GCGTCCATCTTCAAGTTGTTTTCCAGCAAAGATAAGACGCTGTTGGTCTGGGGGAATACC 528
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
|||||| || |||||| ||| | | || | ||| || | || || ||||| |
Sbjct 529 TTCTTTGTCTTGAATTTTGGCTTTGACATTCTCAATAGTGTCCGATGGTTCAACTTCTAA 588
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124
|| | ||||| ||||| || || || | || |||||||||
Sbjct 589 AGTGATAGTTTTGCCAGTAAGTGTCTTGACAAAGATCTGCATG 631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475139287588680
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