Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq131719 232 6e-56
seq131720 152 5e-32
seq67196 105 6e-18
seq15021 104 2e-17
>seq131719
Length=2163
Score = 232 bits (256), Expect = 6e-56
Identities = 348/492 (71%), Gaps = 2/492 (0%)
Strand=Plus/Plus
Query 59935 GCATATTTTGTCGAATGGGGTGTTTATCCTAGAAATTTTCCTGTAGATCGAGTGCCCACT 59994
|| || || || |||||||| || ||||| || || || || || || || ||||| |
Sbjct 1560 GCTTACTTCGTAGAATGGGGAGTGTATCCGAGGAAGTTCCCCGTGGACCGCGTGCCGATC 1619
Query 59995 CCTAATCTATCGCATATTCTATACGGATTTATTCCGATATGCGGCGGCGACGGTATCAAC 60054
|| ||||| | || | | ||||| || |||||||| ||||| |||||||| ||||||
Sbjct 1620 CCCAATCTGACTCACTTGTTGTACGGGTTCATTCCGATCTGCGGAGGCGACGGCATCAAC 1679
Query 60055 GACAGTCTTAAAACCATAACCGGTAGTTTCGAAGCGCTTCAGCGATCGTGTTCAGGTCGA 60114
|||||||| || || || |||||| | || || ||||| || || || ||
Sbjct 1680 GACAGTCTGAAGGAGATTGAGGGCAGTTTCCAGGCACTCCAGCGTTCCTGCAGCGGCCGC 1739
Query 60115 GACGACTTTAAAGTATCAATTCACGATCCATGGGCCGCCGTCCAGAAACCCCAAAAACAA 60174
|| ||||| ||||| || ||||| || || |||||||| | |||||||| |||||
Sbjct 1740 GAAGACTTCAAAGTGTCCATTCATGACCCCTGGGCCGCTCTTCAGAAACCACAAAAGGGC 1799
Query 60175 GTAACCGCTTGGAACGAACCATACAAAGGTAATTTCGGACAATTAATGGCAGCCAAACTG 60234
| | | ||||||||||| |||||||| || ||||| ||| | ||| |||| |
Sbjct 1800 CTTTCTTCATGGAACGAACCTTACAAAGGAAACTTCGGCCAACTGATGATGTTGAAACAG 1859
Query 60235 GCAAATCCCCACATCAAAGTGTTGCCCTCGATCGGAGGTTGGACTCTATCCGATCCGTTC 60294
|| | || || |||| | ||||| || |||| || |||||| | | ||||| |||
Sbjct 1860 GCGAGACCAGACCTCAAGATTTTGCCTTCCGTCGGCGGCTGGACTTTGGCTGATCCATTC 1919
Query 60295 TTTTACTTTCAC-GATACGGATAAACGAAAGATTTTTGTAGATTCTGTCGTGGAGTTTCT 60353
|||| | ||||| || | | || || | ||| || | ||| || || || ||
Sbjct 1920 TTTTTC-TTCACTGACAAGACAAAGCGTGACCGTTTCGTTGCTTCCGTAAAAGACTTCCT 1978
Query 60354 ACAGACGTGGAAATTTTTCGACGGTGTCGACATCGACTGGGAGTTTCCCGGCGGAAAAGG 60413
||||| |||||||| || ||||| ||||| ||||| |||||||| || || || |||||
Sbjct 1979 CCAGACCTGGAAATTCTTTGACGGCGTCGATATCGATTGGGAGTTCCCTGGAGGTAAAGG 2038
Query 60414 TGCCAATCCCAA 60425
|| || |||||
Sbjct 2039 CGCTAACCCCAA 2050
>seq131720
Length=1042
Score = 152 bits (168), Expect = 5e-32
Identities = 405/612 (66%), Gaps = 15/612 (2%)
Strand=Plus/Plus
Query 60523 TACGAGTTGACCAGCGCAATTAGCGCCGGCGATGACAAAATCGCCGTCGTCGACTACACC 60582
||||||||||| || || || || || ||||| ||| |||||||| |||| |
Sbjct 80 TACGAGTTGACGTCTGCCATCAGTGCTGGTTGGGACAAGATCCAAGTCGTCGATTACAGC 139
Query 60583 GCTGCTCAAGAATATTTAGATTTAAtttttttGATGACGTACGATTTTAAAGGAGCCTGG 60642
|| || || |||| | || || || || |||| |||||||| || ||||| |||
Sbjct 140 GCAGCGCAGAAATACATGGACCACATATTCTTCATGAGCTACGATTTCAAGGGAGCGTGG 199
Query 60643 TCGAATAACGATCTGGGCTATCAGACTACTCTATACGCTCCTTCGTTTAATCCTAAAGAA 60702
|| ||| | ||| || | ||| || |||| |||||||| || | | || || ||
Sbjct 200 TCCAATGATACTCTTGGTCACCAGGCTTCTCTGTACGCTCCATCTTGGCAGCCGAAGGAG 259
Query 60703 CATTATACTACCGATTTTGCCGTTCGTGCTCTACTCAA--GCAAAAAGTCGAGAAT---a 60757
||| || || ||||| | ||| | |||| || || || | |||| |
Sbjct 260 ACTTACACGACTGATTTCGGCGT----GAAATACTTGTTGGCGCAAGGT-GTGAATCCTA 314
Query 60758 aaaaaaTTATTGTCGGCGTGGCCATGTACGGTCGCGGCTGGACCGGCGTAAGCGATTTTG 60817
| || ||| | || || || ||||||||||| || ||||||||||| || || || ||
Sbjct 315 AGAAGATTGTGGTTGGTGTTGCCATGTACGGACGTGGCTGGACCGGTGTCCACGGTTATG 374
Query 60818 TTGACGATAATAATCCATTTTCCGGAACGGCCAAGGGACCGGTCAAAGGAACATGGGAAG 60877
| | | | ||||| || | || | || | ||| || || ||||| || ||| |||
Sbjct 375 ---AAGGTGACAATCCTTTCACTGGCAATGCAACGGGTCCTGTTAAAGGTACTTGGCAAG 431
Query 60878 ACGGAGTCGTCGACTATAGAGAGATTTTCAATAATTTCGTCGCCAATAACCCGATGGAAT 60937
| || || || ||||| ||||| || || || | | || || | | |
Sbjct 432 ATGGTGTGGTGGACTACAGAGAAATAGCAGATGATATAGCTGCTGGGAAATGGGAGTACC 491
Query 60938 ATTACGATTCCGTTGCAAAAGCGGCGTACGTCTTTAATAACTCGACCGGCGAGCTCATCA 60997
|||| ||| || ||| ||||| | ||||| || | || | ||||| || || || |
Sbjct 492 ATTATGATAAGGTGGCACAAGCGCCATACGTGTTCAGGAAGGCCACCGGAGATCTAATAA 551
Query 60998 CTTACGACAATCCTCGGTCGGTTCTGGATAAAGCAAAATATGTATTGGACTATAGCTTGG 61057
| |||||| || | | || ||| | || |||| ||||| || | | | ||||
Sbjct 552 CGTACGACGATGCCAGATCAGTTATAGAGAAAGGCAAATACGTCAGAAATAACAAATTGG 611
Query 61058 GTGGTTTGTTCGCTTGGGAGATCGACGCCGACAACGGATTAC-TTCTAAACGCCATGAAC 61116
||||||||||||| ||||| || ||||| ||||| || | || | | || || ||||||
Sbjct 612 GTGGTTTGTTCGCGTGGGAAATTGACGCGGACAATGG-TGACATATTGAATGCTATGAAC 670
Query 61117 AGCGGTCTCGGC 61128
| |||||||||
Sbjct 671 ATGGGTCTCGGC 682
>seq67196
Length=1848
Score = 105 bits (116), Expect = 6e-18
Identities = 144/199 (72%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | || || ||||| || || |||||| ||||||| | ||||||||| |
Sbjct 922 ATGCAGATTTTCGTGAAAACTTTGACTGGAAAAACGATCACCTTGGAAGTCGAACCTTCA 863
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|||||||||||| | || ||| || ||| || ||||| ||||| || || ||||||
Sbjct 862 GATACTATCGAGAACGTTAAAGCTAAGATTCAGGACAAAGAAGGTATCCCCCCAGATCAG 803
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ATGTCAGCGATTACA 25352
|| | || |||| | || || || | ||||| | | | ||||| |||||||
Sbjct 802 CAGCGTCTGATTTTTGCTGGAAAGCAGTTGGAAGACGGCCGTACTTTGTCA--GATTACA 745
Query 25353 ATATTCAAAAAGAATCCAC 25371
|||||||||||||||||||
Sbjct 744 ATATTCAAAAAGAATCCAC 726
Score = 98.7 bits (108), Expect = 9e-16
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | ||||| ||||| || || || ||| | || || | || || || |||| |
Sbjct 238 ATGCAGATCTTTGTTAAAACCTTGACTGGTAAAACTATTACTCTAGAGGTAGA-GCCATC 180
Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293
|| ||||| ||| | |||||| || ||| ||||| ||||| || || || || ||
Sbjct 179 AGACACTATTGAGAATGTAAAAGCCAAGATTCAAGATAAGGAGGGGATCCCCCCAGACCA 120
Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353
||| ||||| |||| || ||||||||||| ||||||| | | | || |||||
Sbjct 119 GCAGAGACTGATTTTCGCTGGCAAACAACTTGAAGATGGGCGCACCCTATCTGACTACAA 60
Query 25354 TATTCAAAAAGAATCCAC 25371
|||||| |||||||| ||
Sbjct 59 TATTCAGAAAGAATCTAC 42
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/213 (69%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | ||||| ||||| || || || ||| | ||||| | ||||| || |||| |
Sbjct 466 ATGCAGATCTTTGTTAAAACCTTGACTGGTAAAACTATCACTCTAGAAGTTGA-GCCATC 408
Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293
|| || || || | || ||| || ||| ||||| || ||||| ||||| |||||
Sbjct 407 TGACACCATTGAAAATGTCAAAGCCAAGATTCAGGATAAGGAAGGTATTCCGCCAGATCA 348
Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353
||| | || || | | || ||||| || ||||||| | | | || || ||
Sbjct 347 ACAACGTCTGATCTTTGCTGGAAAACAGCTTGAAGATGGCCGCACCCTATCTGACTATAA 288
Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386
||| ||||||||||||||| ||||| | || ||
Sbjct 287 TATCCAAAAAGAATCCACCCTTCATCTGGTTTT 255
>seq15021
Length=1916
Score = 104 bits (114), Expect = 2e-17
Identities = 171/246 (70%), Gaps = 2/246 (1%)
Strand=Plus/Plus
Query 25159 TTTTCAATTAAACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGAT 25218
|||||| || |||| |||| | || |||||||| |||| || || | ||||| |
Sbjct 714 TTTTCAGTTTTACAA--TGCAGATATTCGTAAAAACCCTAACGGGGAAGACCATCACCCT 771
Query 25219 CGAAGTCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGG 25278
|| || || || ||| ||||| || | || ||| || ||| |||||||||||
Sbjct 772 AGAGGTGGAGGCTTCCGACACTATAGAAAATGTGAAAGCCAAGATTCAAGATAAAGAGGG 831
Query 25279 TATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA 25338
||| || || ||||| ||| || | || | | || |||||| | ||||| | | |
Sbjct 832 TATTCCTCCTGATCAACAACGATTGATCTTTGCTGGTAAACAATTGGAAGACGGCCGCAC 891
Query 25339 TGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGG 25398
| |||||||||||||| |||||||| || |||| || |||||||| | |||||
Sbjct 892 ACTTTCTGATTACAATATTCAGAAAGAATCTACTCTTCACTTGGTGTTAAGGCTCAGAGG 951
Query 25399 AGGAAA 25404
||| ||
Sbjct 952 AGGTAA 957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 443719820528160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |