Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_026430.1
Length=125767
Score E
Sequences producing significant alignments: (Bits) Value
seq174000 113 4e-20
seq67196 82.4 6e-11
>seq174000
Length=6590
Score = 113 bits (124), Expect = 4e-20
Identities = 136/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 99932 CAAAAACCAGAGCAATTGGCCGAAGCCGGTTTTTATTACACCGGCAAAGGTGACAAAGTT 99991
|| ||||| || | || ||||| ||||| || | ||| || || ||||||||||
Sbjct 3099 CAGAAACCGGAAGATTTAGCCGAGGCCGGCTTCTTTTATACAGGACAAGGTGACAAGACC 3040
Query 99992 AAATGTTTTCATTGCGACGGCGGCCTCAAAGACTGGGAAAGCACCGACGAGCCGTGGCAT 100051
||||| ||| |||| |||||||| || ||||| ||||||| | ||| |||||| |
Sbjct 3039 AAATGCTTTTATTGTGACGGCGGTCTTAAAGATTGGGAAAACGATGACATACCGTGGGAA 2980
Query 100052 GAACACGCACGTTGGTTTGATCGCTGCACATACGTGCGGCTTGTAAAGGGTTACGACTAC 100111
||||||||||| ||||| ||| || | || | | ||||||||||||| | || |||
Sbjct 2979 GAACACGCACGATGGTTCAGTCGATGTGCCTATCTCCAGCTTGTAAAGGGTAAAGATTAC 2920
Query 100112 GTGCA 100116
|| ||
Sbjct 2919 GTCCA 2915
Score = 107 bits (118), Expect = 2e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 99637 CAACGGGTTTTATTATTTGGGGCGCGCGGACGAAGTGCGCTGCGCGTTTTGCAAAGTTGA 99696
|||||| || || || | || | | || ||||| || || || |||||||| |||||
Sbjct 3412 CAACGGCTTCTACTACCTAGGCAGGGGTGATGAAGTTCGTTGTGCTTTTTGCAAGGTTGA 3353
Query 99697 AATAATGCGCTGGTTGGAGGGCGACGACCCGGCTGCAGATCATAAACGATGGGCGCCGCA 99756
|| ||||| ||| ||| || |||||||| |||||||||||| |||| |||||||| ||
Sbjct 3352 GATCATGCGGTGGGAGGAAGGGGACGACCCCGCTGCAGATCATCAACGGTGGGCGCCTCA 3293
Query 99757 ATGCCCGTTTATGC 99770
|||||| ||| |||
Sbjct 3292 ATGCCCCTTTCTGC 3279
>seq67196
Length=1848
Score = 82.4 bits (90), Expect = 6e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 106251 AGTTTAAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACA 106310
|| || | |||||| ||||| || ||||| |||||||| || || || ||| |||||
Sbjct 931 AGATTCATAATGCAGATTTTCGTGAAAACTTTGACTGGAAAAACGATCACCTTGGAAGTC 872
Query 106311 GAACCCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCC 106370
||||| ||| || | | | || ||| || ||| ||||||||||| | |||
Sbjct 871 GAACCTTCAGATACTATCGAGAACGTTAAAGCTAAGATTCAGGACAAAGAAGGTATCCCC 812
Query 106371 GTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGC 106430
||||| || | || |||| ||| || || || || ||||| ||| ||
Sbjct 811 CCAGATCAGCAGCGTCTGATTTTTGCTGGAAAGCAGTTGGAAGACGGCCGTACTTTGTCA 752
Query 106431 GATTACAACATACAAAAAGAATCTACACTACAT 106463
|||||||| || ||||||||||| || |||||
Sbjct 751 GATTACAATATTCAAAAAGAATCCACTTTACAT 719
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 401118153262304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |