Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq174000 113 4e-20 seq67196 82.4 6e-11 >seq174000 Length=6590 Score = 113 bits (124), Expect = 4e-20 Identities = 136/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 99932 CAAAAACCAGAGCAATTGGCCGAAGCCGGTTTTTATTACACCGGCAAAGGTGACAAAGTT 99991 || ||||| || | || ||||| ||||| || | ||| || || |||||||||| Sbjct 3099 CAGAAACCGGAAGATTTAGCCGAGGCCGGCTTCTTTTATACAGGACAAGGTGACAAGACC 3040 Query 99992 AAATGTTTTCATTGCGACGGCGGCCTCAAAGACTGGGAAAGCACCGACGAGCCGTGGCAT 100051 ||||| ||| |||| |||||||| || ||||| ||||||| | ||| |||||| | Sbjct 3039 AAATGCTTTTATTGTGACGGCGGTCTTAAAGATTGGGAAAACGATGACATACCGTGGGAA 2980 Query 100052 GAACACGCACGTTGGTTTGATCGCTGCACATACGTGCGGCTTGTAAAGGGTTACGACTAC 100111 ||||||||||| ||||| ||| || | || | | ||||||||||||| | || ||| Sbjct 2979 GAACACGCACGATGGTTCAGTCGATGTGCCTATCTCCAGCTTGTAAAGGGTAAAGATTAC 2920 Query 100112 GTGCA 100116 || || Sbjct 2919 GTCCA 2915 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 99637 CAACGGGTTTTATTATTTGGGGCGCGCGGACGAAGTGCGCTGCGCGTTTTGCAAAGTTGA 99696 |||||| || || || | || | | || ||||| || || || |||||||| ||||| Sbjct 3412 CAACGGCTTCTACTACCTAGGCAGGGGTGATGAAGTTCGTTGTGCTTTTTGCAAGGTTGA 3353 Query 99697 AATAATGCGCTGGTTGGAGGGCGACGACCCGGCTGCAGATCATAAACGATGGGCGCCGCA 99756 || ||||| ||| ||| || |||||||| |||||||||||| |||| |||||||| || Sbjct 3352 GATCATGCGGTGGGAGGAAGGGGACGACCCCGCTGCAGATCATCAACGGTGGGCGCCTCA 3293 Query 99757 ATGCCCGTTTATGC 99770 |||||| ||| ||| Sbjct 3292 ATGCCCCTTTCTGC 3279 >seq67196 Length=1848 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 106251 AGTTTAAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACA 106310 || || | |||||| ||||| || ||||| |||||||| || || || ||| ||||| Sbjct 931 AGATTCATAATGCAGATTTTCGTGAAAACTTTGACTGGAAAAACGATCACCTTGGAAGTC 872 Query 106311 GAACCCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCC 106370 ||||| ||| || | | | || ||| || ||| ||||||||||| | ||| Sbjct 871 GAACCTTCAGATACTATCGAGAACGTTAAAGCTAAGATTCAGGACAAAGAAGGTATCCCC 812 Query 106371 GTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGC 106430 ||||| || | || |||| ||| || || || || ||||| ||| || Sbjct 811 CCAGATCAGCAGCGTCTGATTTTTGCTGGAAAGCAGTTGGAAGACGGCCGTACTTTGTCA 752 Query 106431 GATTACAACATACAAAAAGAATCTACACTACAT 106463 |||||||| || ||||||||||| || ||||| Sbjct 751 GATTACAATATTCAAAAAGAATCCACTTTACAT 719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 401118153262304