Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq168888 230 2e-55 seq131719 185 9e-42 seq231403 145 8e-30 seq67196 123 3e-23 seq15021 123 3e-23 seq193007 89.7 5e-13 seq174000 86.0 6e-12 >seq168888 Length=4095 Score = 230 bits (254), Expect = 2e-55 Identities = 717/1102 (65%), Gaps = 11/1102 (1%) Strand=Plus/Plus Query 8233 GCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGC 8292 ||||| |||||| ||| ||||| || | || || ||||| |||||||||||||| Sbjct 2126 GCCATAATCGAAGCCCAAGTTGAAACGGGAACACCCTATATGCTTTACAAAGACGCTTGT 2185 Query 8293 AACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAA 8352 ||| ||||| || |||| ||| | ||||| || || || || | ||| |||| Sbjct 2186 AACAGGAAAAGTAACCAAAAGAACTTAGGCACTATAAAATGTAGTAACTTATGCACTGAG 2245 Query 8353 ATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTTA 8412 || || | |||| | | |||||||| || || || ||| |||| || | ||| Sbjct 2246 ATCGTTGAATACACGTCAGCTGACGAAGTCGCGGTGTGTAATTTAGCATCTATTGCTTTG 2305 Query 8413 AACGCGTTCGTTGATCGACGCTCAAACACTTACGACTTTGAACAATTGAAAAACGCCGTG 8472 ||| ||| ||| || || | | ||||| || | ||| | |||| ||| | | | Sbjct 2306 AACATGTTTGTTAAT-GAAGATAAAACATATA--ATTTTAATAAATTAAAAGAAGTCACC 2362 Query 8473 CAAGTGACGGTACGCAAT--TTAGATCGCATCATTGATGTCAATTTTTATCCCTTGGAAG 8530 || | | ||| ||| ||| || ||||||||||| ||||| ||||| | | Sbjct 2363 AAAATTAT--TACTCAAAACTTAAATAAAATCATTGATGTTAATTTCTATCCGATCCCGG 2420 Query 8531 AAGCGCGCGTATCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCG 8590 | || | ||| || ||| | || || || | || | || || ||||| || || | Sbjct 2421 AGGCAAGAAAATCAAATATGAGGCATAGGCCTATAGGAATTGGTGTTCAAGGGCTAGCAG 2480 Query 8591 ACGCGTTTGCCATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAACATAA 8650 | | |||| | || ||||| | | || ||||| | | |||| | || || | Sbjct 2481 ATACATTTGTCTTGATGCGCATTGCATATGAAAGTGATGCAGCGATGAAACTTAATCAAC 2540 Query 8651 AAATAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCCGAGAAT 8710 ||||| ||||| | |||||||| ||| ||||||| || ||| ||||||| | | | Sbjct 2541 AAATATTTGAAACCATTTATTACGGGGCACTAGAAGCTAGTTGTGAACTTGCAGAAAAGT 2600 Query 8711 TGGGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACA 8770 || || || | |||| || ||||| |||| | || ||||| |||||||||| Sbjct 2601 ATGGGGTTTATGACACTTACGAAGGAAGCCCATCCAGTCAAGGTATATTACAATACGACA 2660 Query 8771 TGTGGAATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATTGCTC 8830 |||||| || |||||| | ||||| ||| | ||| ||| | |||| || Sbjct 2661 TGTGGAGCAAAACCCCCACCGACCTTTGGAACTGGGATGCTTTAAAAGAAAGAATTTCTA 2720 Query 8831 AATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAA 8890 | |||||| | ||||| | || | ||| ||||| || || | || ||||||| Sbjct 2721 AGCATGGTTTGAGAAATTCTTTATTATTAGCTCCTATGCCAACAGCATCCACGGCTCAAA 2780 Query 8891 TAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTACGTGAGACGAGTGT 8950 | | || ||||| ||||| ||||| || ||||| || | ||| ||| |||| | Sbjct 2781 TTCTTGGTAACAATGAATCATTTGAACCTTTCACATCAAATATATACCAAAGAAGAGTTT 2840 Query 8951 TGGCCGGCGATTTTTTAATGCTGAATCGTCATTTGATGCGCGACTTGATCGAAGCGGGCG 9010 || | ||||| || | | | |||| |||||| |||| || || | ||||| | Sbjct 2841 TGTCTGGCGAGTTCCAAGTTGTAAATCATCATTTATTGCGTGATTTAACTGAAGCAGATT 2900 Query 9011 TTTACGACGACAAAATGCGCGATGCCATCGTGGAAGCCAACGGCAGCGTTCAGAACATTG 9070 | | || || | ||| || || | | || || | || || || | Sbjct 2901 TGTGGGATGAAGACATGAAAAATCTTATAATACACAATAATGGGTCAATACAAAATATAG 2960 Query 9071 ACGCGGTGCCTCAACACATTAAAGAGCTGTATAAAACCGTTTGGGAAATGAAGCAAAGCA 9130 | || | || || | || | ||| || ||||| || |||||||| || | | Sbjct 2961 AAGCTATTCCGAAAGAAATAAGAGATCTATATAAGACTGTTTGGGAGGTGTCTGTTAAAA 3020 Query 9131 CGCTGATCGGCATGGCTGCGGATAGAGGCGCTTTTATTGATCAGAGTCAATCTTTTAACG 9190 | || |||||||| ||||| || || |||||||| || ||||| ||||||||| Sbjct 3021 CTACAATTCAAATGGCTGCCGATAGGGGTGCATTTATTGACCAAAGTCAGTCTTTTAACA 3080 Query 9191 TGTTCGTAGCCGCACCAACTTACGCTTTGATGTCCAGC-ATTCATTATTTAACTTGGAAA 9249 | ||||| | ||||| ||||| | || || | ||||| | || |||||||| Sbjct 3081 TTCATGTAGCTGAACCAAATTACG-GTAAATTAACATCGATTCACTTTTATGCTTGGAAA 3139 Query 9250 ATGGGTTTAAAAACAGGCATGTACTATTTGCGCACAAAACCCGCCGCTGAACCTATCAAA 9309 |||||| | ||||| |||||||| |||||| | ||||| || || ||| | |||| | Sbjct 3140 ATGGGTCTTAAAACCGGCATGTATTATTTGAGAACAAAGCCAGCTGCTAATGCTATACAG 3199 Query 9310 TTTACAGTT--TTAAACAAAAG 9329 ||||||||| | || |||||| Sbjct 3200 TTTACAGTTGATAAATCAAAAG 3221 >seq131719 Length=2163 Score = 185 bits (204), Expect = 9e-42 Identities = 343/499 (69%), Gaps = 12/499 (2%) Strand=Plus/Plus Query 104572 GCCTATTTTGTAGAGTGGGGTGTGTATCAACGCGCGTTTGCCGCCAGCGACGTGCCCGCG 104631 || || || ||||| ||||| ||||||| | ||| ||| | |||||| Sbjct 1560 GCTTACTTCGTAGAATGGGGAGTGTATCCGAGGAAGTTCCCCGTGGACCGCGTGCCGATC 1619 Query 104632 CCCAATCTGTCGCACATGCTTTACGGATTTATACCGATTTGCGGTGGCGACGGCATCAAC 104691 ||||||||| | ||| || | ||||| || || ||||| ||||| ||||||||||||||| Sbjct 1620 CCCAATCTGACTCACTTGTTGTACGGGTTCATTCCGATCTGCGGAGGCGACGGCATCAAC 1679 Query 104692 GACGCTCTAAAGACCGTTCCGGGTAGTTTTGAAGCGTTGCAAAAATCGTGCGCTGGACGG 104751 ||| ||| ||| || ||| ||||| | || | || || ||| || || Sbjct 1680 GACAGTCTGAAGGAGATTGAGGGCAGTTTCCAGGCACTCCAGCGTTCCTGCAGCGGCCGC 1739 Query 104752 GAAAACTTCAAAGTGGCCATTCACGATCCGTGGGCGGCGGTGCAAAAACCGCAAAAAGGT 104811 ||| ||||||||||| ||||||| || || ||||| || | || ||||| ||||| || Sbjct 1740 GAAGACTTCAAAGTGTCCATTCATGACCCCTGGGCCGCTCTTCAGAAACCACAAAAGGGC 1799 Query 104812 GCCTCCGCTTGGAACGAACCGTACAAAGGCAATTTTGGTCAGATAATGGCCATCAAAAAA 104871 || | ||||||||||| |||||||| || || || || | ||| | ||| | Sbjct 1800 CTTTCTTCATGGAACGAACCTTACAAAGGAAACTTCGGCCAACTGATGATGTTGAAACAG 1859 Query 104872 GCCAATCCTCAATTGCGCGTATTGCCCTCGGTGGGCGGGTGGAC----GCTG-TCCGATC 104926 || | || | | | ||||| || || ||||| ||||| |||| ||| || Sbjct 1860 GCGAGACCAGACCTCAAGATTTTGCCTTCCGTCGGCGGCTGGACTTTGGCTGATCCATTC 1919 Query 104927 CTTTTTATCACATGCACGACGCTGAAAAACGTGCCACGTTT-GTGGAGTCGGTGCGCGAA 104985 |||| |||| || ||| ||| |||| | ||||| || | || || || Sbjct 1920 TTTTTCTTCACTGACAAGAC-----AAAGCGTGAC-CGTTTCGTTGCTTCCGTAAAAGAC 1973 Query 104986 TTTTTGTTGACTTGGAAATTCTTCGATGGCGTCGACATCGATTGGGAGTTTCCGGGCGGC 105045 || | ||| ||||||||||| || |||||||| |||||||||||||| || || || Sbjct 1974 TTCCTCCAGACCTGGAAATTCTTTGACGGCGTCGATATCGATTGGGAGTTCCCTGGAGGT 2033 Query 105046 AAAGGCGCCAACCCCAATC 105064 |||||||| |||||||||| Sbjct 2034 AAAGGCGCTAACCCCAATC 2052 >seq231403 Length=827 Score = 145 bits (160), Expect = 8e-30 Identities = 147/187 (79%), Gaps = 12/187 (6%) Strand=Plus/Plus Query 138508 TTAAAATAAAAATGCATAAGGTGAAATTATTTCAATGCAGTGGCCCACAGTTATTTGCCC 138567 |||||||| |||||| || |||||||| |||||| | ||||| |||||||||||| | Sbjct 431 TTAAAATATAAATGCGTATGGTGAAATAATTTCATTACAGTG-CCCACAGTTATTAGTTT 489 Query 138568 GTTTTGCAAATCGTTTATAGCATTATCAATTTCTGTATCAATTTCTAGGTAGCGATTACT 138627 |||| |||||| ||||| |||||||||||| ||| | |||| | ||||| ||| | Sbjct 490 ATTTTTCAAATCCTTTATTTCATTATCAATTT----ATCTAATTCTTGATAGCGTTTAAT 545 Query 138628 TTTCTTACAGTTAGTTTT---AAAAATATTACTGACTTTGGTCTCCTTAATTAATATGTC 138684 ||| || ||| |||||| ||||||||||| |||| ||||||||||| || || || Sbjct 546 TTT-TTGCAGCCAGTTTTTAAAAAAATATTAC---CTTTAGTCTCCTTAATCAAAATTTC 601 Query 138685 TAGTAAA 138691 ||||||| Sbjct 602 TAGTAAA 608 >seq67196 Length=1848 Score = 123 bits (136), Expect = 3e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 ||||| | ||||| | || || |||| |||||||| |||||||| ||||| || | | Sbjct 696 CCTCCGCGAAGTCGTAGAACAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGAC 755 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | ||| || | ||| || || |||||||||| |||||||||||| || || Sbjct 756 AAAG-TACGGCCGTCTTCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGG 814 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || |||||||| || ||||| || ||| || || | || || || | ||| || Sbjct 815 GATACCTTCTTTGTCCTGAATCTTAGCTTTAACGTTCTCGATAGTATCTGAAGGTTCGAC 874 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || | || || ||||| || || |||||||| |||||||| |||||| || Sbjct 875 TTCCAAGGTGATCGTTTTTCCAGTCAAAGTTTTCACGAAAATCTGCATTATG 926 Score = 100 bits (110), Expect = 3e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| || || || | || ||||| || ||||| |||||||| | ||| | Sbjct 477 AGACGCAGTACTAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGATAGGGTACGC 536 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || || |||||||| |||||||||| | |||||| || || || || ||||| Sbjct 537 CCATCTTCAAGTTGTTTGCCAGCAAAAATCATTCTCTGCTGGTCTGGGGGGATCCCTTCC 596 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || ||||||||||| || || || | |||||| || | || || || || ||| Sbjct 597 TTATCTTGAATTTTAGCCTTAACGTTTTCAATTGTGTCCGATGGCTCAACTTCAAGTGTA 656 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || || | |||||||| || || ||||| Sbjct 657 ATAGTTTTGCCAGTAAGGGTTTTAACAAAGATCTGCAT 694 >seq15021 Length=1916 Score = 123 bits (136), Expect = 3e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 || ||||||||||| | ||||| | ||| || || ||||| || ||||| ||||| || Sbjct 957 TTACCTCCTCTGAGCCTTAACACCAAGTGAAGAGTAGATTCTTTCTGAATATTGTAATCA 898 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 || ||| | ||| || | ||||| || ||||| ||||| || || ||||| || Sbjct 897 GAAAGTGTGCGGCCGTCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCAGGA 838 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || || ||||| |||||||| || ||| || || | |||||||| | ||| Sbjct 837 GGAATACCCTCTTTATCTTGAATCTTGGCTTTCACATTTTCTATAGTGTCGGAAGCCTCC 778 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || || || ||||| || || |||| ||||| ||||| || |||||| Sbjct 777 ACCTCTAGGGTGATGGTCTTCCCCGTTAGGGTTTTTACGAATATCTGCATT 727 >seq193007 Length=659 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576 || ||||| || || || ||||||||| | ||| | || || || ||||| || Sbjct 434 GTAGATTCTTTCTGGATATTGTAGTCGGATAGTGTGCGTCCATCTTCAAGTTGTTTTCCA 493 Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636 ||||| || | |||||| || || || || || |||||||| ||||||||||| |||| Sbjct 494 GCAAAGATAAGACGCTGTTGGTCTGGGGGAATACCTTCTTTGTCTTGAATTTTGGCTTTG 553 Query 134637 ACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTT 134696 || || | ||||| || | ||| || || | ||| || ||||| || || | || Sbjct 554 ACATTCTCAATAGTGTCCGATGGTTCAACTTCTAAAGTGATAGTTTTGCCAGTAAGTGTC 613 Query 134697 TTAACGAAAATTTGCAT 134713 || || || || ||||| Sbjct 614 TTGACAAAGATCTGCAT 630 >seq174000 Length=6590 Score = 86.0 bits (94), Expect = 6e-12 Identities = 125/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 52802 TTGCGCAAAAACGGACATTGCGGTGCCCACCGTCGATGATCGATTTCTGGATCGTCGCCA 52861 || |||| ||| || ||||| || ||||||||| ||||||| | || ||||| || Sbjct 3275 TTACGCAGAAAGGGGCATTGAGGCGCCCACCGTTGATGATCTGCAGCGGGGTCGTCCCCT 3334 Query 52862 TCCATCCATTTCATTATTTCCACTTTGCAAAAAGCACATCGCACTTCGTCGTTGCGACCC 52921 ||| ||| ||| || || || |||||||||||||| || ||||| || | || Sbjct 3335 TCCTCCCACCGCATGATCTCAACCTTGCAAAAAGCACAACGAACTTCATCACCCCTGCCT 3394 Query 52922 AAATAATAAAAACCGTTTCGAGCGAGTCGTGCGGGCGACAGAAAACACAACGGCCAT 52978 | || || || ||||| || || ||| |||| ||||||||| || |||||| Sbjct 3395 AGGTAGTAGAAGCCGTTGCGTGCCAGTAACTCGGGGGACAGAAAAGTTAAAGGCCAT 3451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 503837584438760