Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq168888 618 6e-172 seq105002 89.7 7e-13 seq58710 86.0 9e-12 >seq168888 Length=4095 Score = 618 bits (684), Expect = 6e-172 Identities = 1217/1778 (68%), Gaps = 24/1778 (1%) Strand=Plus/Minus Query 68365 TTATCCAATGTAAACTGAATGGG-TGAGGATGCGGGTTTTGTACGTAGATAGTACATACC 68423 ||||| | ||||||||| || | | || | || || ||||| | | ||| ||||| || Sbjct 3213 TTATCAACTGTAAACTGTATAGCATTAGCA-GCTGGCTTTGTTCTCAAATAATACATGCC 3155 Query 68424 GGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGG 68483 |||||| ||||| | |||| | || || || || ||||| ||| ||| |||| Sbjct 3154 GGTTTTAAGACCCATTTTCCAAGCATAAAAGTGAATCGATGTTAATTTACCGTAATTTGG 3095 Query 68484 ATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGC 68543 || |||| |||||| || | || |||||||| || || || || || ||||| || || Sbjct 3094 TTCAGCTACATGAATGTTAAAAGACTGACTTTGGTCAATAAATGCACCCCTATCGGCAGC 3035 Query 68544 CATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATC 68603 ||||| || || | || || | ||||||| ||||||| | | | | | || || Sbjct 3034 CATTTGAATTGTAGTTTTAACAGACACCTCCCAAACAGTCTTATATAGATCTCTTATTTC 2975 Query 68604 ATCTGGAAG-GCTCGTAT--TTTGAATGGATCCACCATCGGATATAATTATATTCTTGAT 68660 | |||| ||| ||| |||| || || ||| || | ||| || | ||| || || Sbjct 2974 TTTCGGAATAGCTTCTATATTTTGTATTGACCCATTATTGTGTATTATAAGATTTTTCAT 2915 Query 68661 CTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTG 68720 || |||| |||||| | | || |||||| | | | | ||| |||| || | ||| Sbjct 2914 GTCTTCATCCCACAAATCTGCTTCAGTTAAATCACGCAATAAATGATGATTTACAACTTG 2855 Query 68721 AAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTC 68780 || || ||||| || ||||| | ||| ||||| || | ||||| | ||||| Sbjct 2854 GAACTCGCCAGACAAAACTCTTCTTTGGTATATATTTGATGTGAAAGGTTCAAATGATTC 2795 Query 68781 ATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATT 68840 ||| || || ||||||||||| || ||||| ||||||||||| || | |||||| ||| Sbjct 2794 ATTGTTACCAAGAATTTGAGCCGTGGATGCTGTTGGCATAGGAGCTAATAATAAAGAATT 2735 Query 68841 TCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGG 68900 ||| | |||||| | ||| | ||||||| | | ||| | |||||| || | || Sbjct 2734 TCTCAAACCATGCTTAGAAATTCTTTCTTTTAAAGCATCCCAGTTCCAAAGGTCGGTGGG 2675 Query 68901 TACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTA-TATG 68959 |||| | |||||||||| || || | ||| | || | | | || || | Sbjct 2674 GGTTTTGCTCCACATGTCGTATTGTAATATACCTTGACTGG-ATGGGCTTCCTTCGTAAG 2616 Query 68960 TTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAA 69019 | |||||| || | || ||| || ||||||||||| || |||| ||| |||||||||| Sbjct 2615 TGTCATAAACCCCATACTTTTCTGCAAGTTCACAACTAGCTTCTAGTGCCCCGTAATAAA 2556 Query 69020 TTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTA 69079 | ||||| || || | | ||| || | ||| | ||| || ||| | | | Sbjct 2555 TGGTTTCAAATATTTGTTGATTAAGTTTCATCGCTGCATCACTTTCATATGCAATGCGCA 2496 Query 69080 AAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTAT 69139 | | ||||| |||||| | || ||||| ||||| || ||||| ||||| ||| ||| Sbjct 2495 TCAAGACAAATGTATCTGCTAGCCCTTGAACACCAATTCCTATAGGCCTATGCCTCATAT 2436 Query 69140 TTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATT-AAGATTT 69198 |||| || || || || || ||||| |||||| ||| || |||||||| ||| ||| Sbjct 2435 TTGATTTTCTTGCCTCCGGGATCGGATAGAAATTAACATCAATGATTTTATTTAAGTTTT 2376 Query 69199 CGGACTACTACTTTAACC-ACGTCCTTTAGTTTGAGAAAATCAAATCGTCCATCTA---T 69254 || || || ||| || || |||| ||| ||||| | || | |||| | Sbjct 2375 --GAGTAATAATTTTGGTGACTTCTTTTAATTTATTAAAATTATATGTTTTATCTTCATT 2318 Query 69255 AACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGC 69314 ||||||||| |||| || | |||||||| |||||| || || || || | || | Sbjct 2317 AACAAACATGTTCAAAGCAATAGATGCTAAATTACACACCGCGACTTCGTCAGCTGACGT 2258 Query 69315 ATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATT 69374 |||| | ||||| || |||| ||||||||||| ||||| || | || | || || Sbjct 2257 GTATTCAACGATCTCAGTGCATAAGTTACTACATTTTATAGTGCCTAAGTTCTTTTGGTT 2198 Query 69375 ACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGA 69434 ||| || ||||||| ||||| |||||||| ||| | || || || ||||||| || | Sbjct 2197 ACTTTTCCTGTTACAAGCGTCTTTGTAAAGCATATAGGGTGTTCCCGTTTCAACTTGGGC 2138 Query 69435 TTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTTCTCTTT 69494 |||||| || | |||||| | || || | | || ||||||| ||||| Sbjct 2137 TTCGATTATGGCTTTCCATAAAACTTGGGCGCTGACCTGTTTCACAAAACGCTTTTCTTT 2078 Query 69495 TTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACA 69554 ||| |||||| |||||| ||||||||||||||||||| ||| | ||||||||||| Sbjct 2077 TTCGTATTGTTCATATAGATTTTCGAATTCATCTCCCCAACAGTCAGCTAATCCAGGACA 2018 Query 69555 TTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATC 69614 |||| |||||||| | ||| | |||| | | ||||| ||||||||| ||||| Sbjct 2017 ATCATGAGGACACATAAGACTCCAGTCTTCATTTTTTTCAACTCTTTTCATAAAAAGATC 1958 Query 69615 GGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATT--TTCTTCATTTCCTGTAttt 69672 || ||||| | ||| ||||| | | |||| | || | |||||| || || || || Sbjct 1957 CGGTATCCATAAAGC-ATAAA-ACAACTCTCGAGCTCGTACTTCTTCTTTGCCAGTGTTC 1900 Query 69673 tttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATG 69732 ||||| || |||||||| || | ||| || | |||||| || |||| ||| | || | Sbjct 1899 TTTTTGAGGTCGAGAAATTCAAAAATGTCTGCATGCCAAGGCTCTAAATACACTGCAAAA 1840 Query 69733 ACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTC 69792 |||| || ||||||||||| || ||||||| ||||| || ||||| || || || || Sbjct 1839 GCTCCGGGGCGTTTATTTCCACCTTGATCTACATATCTTGCTGTGTTGTTGTAAACCCTA 1780 Query 69793 AGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCG 69852 ||||| || | | || |||||| ||||||||| || | ||||| |||| | || Sbjct 1779 AGCATTGGCACGAGTCCGTTAGATACACCATTTGTGCCTGCGATATATGATCCTTTAGCT 1720 Query 69853 CGAATATTACTAATAGATAGA--CCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAAC 69910 | ||| | | | | | || || ||||| || || |||||| || || ||||| Sbjct 1719 CTGATA-CAGTGA-ACGTGGACTCCGATTCCACCAGCAGATTTAGATATAAGCGCACATT 1662 Query 69911 GTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGC 69970 |||| || || ||||||||||| || || || |||||| |||| | ||||||||| Sbjct 1661 GTTTTAAAGTATCATATATACCTTCAATACTGTCATCTTTCATAGCTACAAGAAAACAAG 1602 Query 69971 TAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACC 70030 |||| ||| | || || | || || | || || ||||| || || Sbjct 1601 ATGACAATTGTGGCCGTGGTGTGGCAGCTGAGAACAGGGTTGGGCTGGCGTGTGTAAAAT 1542 Query 70031 ATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCACTGATGAATT 70089 |||||||||| |||| |||||| || | || || | |||||||| ||| ||| || Sbjct 1541 ATTTTTCAGACAGCAAATTGTAAGTATTTATGGCAGCATCTATATCTTCAC-CATGGATA 1483 Query 70090 CCTATCGCGACACGCATCAACATATGCTGAGGTCGTTC 70127 || || | || | ||||| ||||||||| |||||||| Sbjct 1482 CCAATAGATACTCTCATCAGCATATGCTGTGGTCGTTC 1445 >seq105002 Length=4868 Score = 89.7 bits (98), Expect = 7e-13 Identities = 116/159 (73%), Gaps = 1/159 (1%) Strand=Plus/Minus Query 70338 AAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGC 70397 |||| |||| | ||||| ||||||| || ||||| |||| || || |||| | ||| Sbjct 3815 AAAT-GTTTCTGAGTTTCTTTGTGTAGGTTGGATATAGCTAGTCGAGCAGCTAACACAGC 3757 Query 70398 ATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTC 70457 |||||||||||| | ||||| ||| || || |||| || ||||| |||||||||| Sbjct 3756 ATAGTCAGGATGATTAGTAGTCATAGTTGCCGCGGTTTCTGCTGCTAAATTATCTAATTC 3697 Query 70458 TATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTT 70496 | |||||| || || || | ||| | |||||||| Sbjct 3696 AACAGTTGTTACACCAGAGTAAATCCCATTTATAACTTT 3658 >seq58710 Length=10965 Score = 86.0 bits (94), Expect = 9e-12 Identities = 97/129 (75%), Gaps = 1/129 (1%) Strand=Plus/Plus Query 162492 TGTT-ATGACCCCTATTAATCCTATGCTAGCAGAATCATGCGATTCCGTTAACAAGGCAT 162550 |||| ||||| ||| | || |||||||| || |||| | || ||| | | |||| Sbjct 3193 TGTTGATGACACCTGTGCTCCCAATGCTAGCGGAGGCATGTAAGTCTGTTGAAATGGCAA 3252 Query 162551 TTAAAAAATTTCCATCTGGGATGTTTGCAGAAGTCAAATATGATGGTGAACGAGTGCAAG 162610 | || |||| |||| ||| ||||| ||||| |||||||||||||||| |||||||| | Sbjct 3253 TGAAGAAATGTCCAAATGGAATGTTCTCAGAAATCAAATATGATGGTGAGCGAGTGCAGG 3312 Query 162611 TTCATAAAA 162619 | || |||| Sbjct 3313 TGCACAAAA 3321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 684787428139320