Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq168888 618 6e-172
seq105002 89.7 7e-13
seq58710 86.0 9e-12
>seq168888
Length=4095
Score = 618 bits (684), Expect = 6e-172
Identities = 1217/1778 (68%), Gaps = 24/1778 (1%)
Strand=Plus/Minus
Query 68365 TTATCCAATGTAAACTGAATGGG-TGAGGATGCGGGTTTTGTACGTAGATAGTACATACC 68423
||||| | ||||||||| || | | || | || || ||||| | | ||| ||||| ||
Sbjct 3213 TTATCAACTGTAAACTGTATAGCATTAGCA-GCTGGCTTTGTTCTCAAATAATACATGCC 3155
Query 68424 GGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGG 68483
|||||| ||||| | |||| | || || || || ||||| ||| ||| ||||
Sbjct 3154 GGTTTTAAGACCCATTTTCCAAGCATAAAAGTGAATCGATGTTAATTTACCGTAATTTGG 3095
Query 68484 ATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGC 68543
|| |||| |||||| || | || |||||||| || || || || || ||||| || ||
Sbjct 3094 TTCAGCTACATGAATGTTAAAAGACTGACTTTGGTCAATAAATGCACCCCTATCGGCAGC 3035
Query 68544 CATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATC 68603
||||| || || | || || | ||||||| ||||||| | | | | | || ||
Sbjct 3034 CATTTGAATTGTAGTTTTAACAGACACCTCCCAAACAGTCTTATATAGATCTCTTATTTC 2975
Query 68604 ATCTGGAAG-GCTCGTAT--TTTGAATGGATCCACCATCGGATATAATTATATTCTTGAT 68660
| |||| ||| ||| |||| || || ||| || | ||| || | ||| || ||
Sbjct 2974 TTTCGGAATAGCTTCTATATTTTGTATTGACCCATTATTGTGTATTATAAGATTTTTCAT 2915
Query 68661 CTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTG 68720
|| |||| |||||| | | || |||||| | | | | ||| |||| || | |||
Sbjct 2914 GTCTTCATCCCACAAATCTGCTTCAGTTAAATCACGCAATAAATGATGATTTACAACTTG 2855
Query 68721 AAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTC 68780
|| || ||||| || ||||| | ||| ||||| || | ||||| | |||||
Sbjct 2854 GAACTCGCCAGACAAAACTCTTCTTTGGTATATATTTGATGTGAAAGGTTCAAATGATTC 2795
Query 68781 ATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATT 68840
||| || || ||||||||||| || ||||| ||||||||||| || | |||||| |||
Sbjct 2794 ATTGTTACCAAGAATTTGAGCCGTGGATGCTGTTGGCATAGGAGCTAATAATAAAGAATT 2735
Query 68841 TCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGG 68900
||| | |||||| | ||| | ||||||| | | ||| | |||||| || | ||
Sbjct 2734 TCTCAAACCATGCTTAGAAATTCTTTCTTTTAAAGCATCCCAGTTCCAAAGGTCGGTGGG 2675
Query 68901 TACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTA-TATG 68959
|||| | |||||||||| || || | ||| | || | | | || || |
Sbjct 2674 GGTTTTGCTCCACATGTCGTATTGTAATATACCTTGACTGG-ATGGGCTTCCTTCGTAAG 2616
Query 68960 TTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAA 69019
| |||||| || | || ||| || ||||||||||| || |||| ||| ||||||||||
Sbjct 2615 TGTCATAAACCCCATACTTTTCTGCAAGTTCACAACTAGCTTCTAGTGCCCCGTAATAAA 2556
Query 69020 TTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTA 69079
| ||||| || || | | ||| || | ||| | ||| || ||| | | |
Sbjct 2555 TGGTTTCAAATATTTGTTGATTAAGTTTCATCGCTGCATCACTTTCATATGCAATGCGCA 2496
Query 69080 AAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTAT 69139
| | ||||| |||||| | || ||||| ||||| || ||||| ||||| ||| |||
Sbjct 2495 TCAAGACAAATGTATCTGCTAGCCCTTGAACACCAATTCCTATAGGCCTATGCCTCATAT 2436
Query 69140 TTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATT-AAGATTT 69198
|||| || || || || || ||||| |||||| ||| || |||||||| ||| |||
Sbjct 2435 TTGATTTTCTTGCCTCCGGGATCGGATAGAAATTAACATCAATGATTTTATTTAAGTTTT 2376
Query 69199 CGGACTACTACTTTAACC-ACGTCCTTTAGTTTGAGAAAATCAAATCGTCCATCTA---T 69254
|| || || ||| || || |||| ||| ||||| | || | |||| |
Sbjct 2375 --GAGTAATAATTTTGGTGACTTCTTTTAATTTATTAAAATTATATGTTTTATCTTCATT 2318
Query 69255 AACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGC 69314
||||||||| |||| || | |||||||| |||||| || || || || | || |
Sbjct 2317 AACAAACATGTTCAAAGCAATAGATGCTAAATTACACACCGCGACTTCGTCAGCTGACGT 2258
Query 69315 ATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATT 69374
|||| | ||||| || |||| ||||||||||| ||||| || | || | || ||
Sbjct 2257 GTATTCAACGATCTCAGTGCATAAGTTACTACATTTTATAGTGCCTAAGTTCTTTTGGTT 2198
Query 69375 ACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGA 69434
||| || ||||||| ||||| |||||||| ||| | || || || ||||||| || |
Sbjct 2197 ACTTTTCCTGTTACAAGCGTCTTTGTAAAGCATATAGGGTGTTCCCGTTTCAACTTGGGC 2138
Query 69435 TTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTTCTCTTT 69494
|||||| || | |||||| | || || | | || ||||||| |||||
Sbjct 2137 TTCGATTATGGCTTTCCATAAAACTTGGGCGCTGACCTGTTTCACAAAACGCTTTTCTTT 2078
Query 69495 TTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACA 69554
||| |||||| |||||| ||||||||||||||||||| ||| | |||||||||||
Sbjct 2077 TTCGTATTGTTCATATAGATTTTCGAATTCATCTCCCCAACAGTCAGCTAATCCAGGACA 2018
Query 69555 TTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATC 69614
|||| |||||||| | ||| | |||| | | ||||| ||||||||| |||||
Sbjct 2017 ATCATGAGGACACATAAGACTCCAGTCTTCATTTTTTTCAACTCTTTTCATAAAAAGATC 1958
Query 69615 GGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATT--TTCTTCATTTCCTGTAttt 69672
|| ||||| | ||| ||||| | | |||| | || | |||||| || || || ||
Sbjct 1957 CGGTATCCATAAAGC-ATAAA-ACAACTCTCGAGCTCGTACTTCTTCTTTGCCAGTGTTC 1900
Query 69673 tttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATG 69732
||||| || |||||||| || | ||| || | |||||| || |||| ||| | || |
Sbjct 1899 TTTTTGAGGTCGAGAAATTCAAAAATGTCTGCATGCCAAGGCTCTAAATACACTGCAAAA 1840
Query 69733 ACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTC 69792
|||| || ||||||||||| || ||||||| ||||| || ||||| || || || ||
Sbjct 1839 GCTCCGGGGCGTTTATTTCCACCTTGATCTACATATCTTGCTGTGTTGTTGTAAACCCTA 1780
Query 69793 AGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCG 69852
||||| || | | || |||||| ||||||||| || | ||||| |||| | ||
Sbjct 1779 AGCATTGGCACGAGTCCGTTAGATACACCATTTGTGCCTGCGATATATGATCCTTTAGCT 1720
Query 69853 CGAATATTACTAATAGATAGA--CCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAAC 69910
| ||| | | | | | || || ||||| || || |||||| || || |||||
Sbjct 1719 CTGATA-CAGTGA-ACGTGGACTCCGATTCCACCAGCAGATTTAGATATAAGCGCACATT 1662
Query 69911 GTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGC 69970
|||| || || ||||||||||| || || || |||||| |||| | |||||||||
Sbjct 1661 GTTTTAAAGTATCATATATACCTTCAATACTGTCATCTTTCATAGCTACAAGAAAACAAG 1602
Query 69971 TAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACC 70030
|||| ||| | || || | || || | || || ||||| || ||
Sbjct 1601 ATGACAATTGTGGCCGTGGTGTGGCAGCTGAGAACAGGGTTGGGCTGGCGTGTGTAAAAT 1542
Query 70031 ATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCACTGATGAATT 70089
|||||||||| |||| |||||| || | || || | |||||||| ||| ||| ||
Sbjct 1541 ATTTTTCAGACAGCAAATTGTAAGTATTTATGGCAGCATCTATATCTTCAC-CATGGATA 1483
Query 70090 CCTATCGCGACACGCATCAACATATGCTGAGGTCGTTC 70127
|| || | || | ||||| ||||||||| ||||||||
Sbjct 1482 CCAATAGATACTCTCATCAGCATATGCTGTGGTCGTTC 1445
>seq105002
Length=4868
Score = 89.7 bits (98), Expect = 7e-13
Identities = 116/159 (73%), Gaps = 1/159 (1%)
Strand=Plus/Minus
Query 70338 AAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGC 70397
|||| |||| | ||||| ||||||| || ||||| |||| || || |||| | |||
Sbjct 3815 AAAT-GTTTCTGAGTTTCTTTGTGTAGGTTGGATATAGCTAGTCGAGCAGCTAACACAGC 3757
Query 70398 ATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTC 70457
|||||||||||| | ||||| ||| || || |||| || ||||| ||||||||||
Sbjct 3756 ATAGTCAGGATGATTAGTAGTCATAGTTGCCGCGGTTTCTGCTGCTAAATTATCTAATTC 3697
Query 70458 TATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTT 70496
| |||||| || || || | ||| | ||||||||
Sbjct 3696 AACAGTTGTTACACCAGAGTAAATCCCATTTATAACTTT 3658
>seq58710
Length=10965
Score = 86.0 bits (94), Expect = 9e-12
Identities = 97/129 (75%), Gaps = 1/129 (1%)
Strand=Plus/Plus
Query 162492 TGTT-ATGACCCCTATTAATCCTATGCTAGCAGAATCATGCGATTCCGTTAACAAGGCAT 162550
|||| ||||| ||| | || |||||||| || |||| | || ||| | | ||||
Sbjct 3193 TGTTGATGACACCTGTGCTCCCAATGCTAGCGGAGGCATGTAAGTCTGTTGAAATGGCAA 3252
Query 162551 TTAAAAAATTTCCATCTGGGATGTTTGCAGAAGTCAAATATGATGGTGAACGAGTGCAAG 162610
| || |||| |||| ||| ||||| ||||| |||||||||||||||| |||||||| |
Sbjct 3253 TGAAGAAATGTCCAAATGGAATGTTCTCAGAAATCAAATATGATGGTGAGCGAGTGCAGG 3312
Query 162611 TTCATAAAA 162619
| || ||||
Sbjct 3313 TGCACAAAA 3321
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 684787428139320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |