Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq168888 140 4e-28 >seq168888 Length=4095 Score = 140 bits (154), Expect = 4e-28 Identities = 885/1404 (63%), Gaps = 36/1404 (3%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| | ||| | ||| | || | || ||||| ||||| ||||| || ||| ||| | Sbjct 1451 CCACAGCATATGCTGATGAGAGTATCTATTGGTATCCATGGTGAAGATATAGATGCTGCC 1510 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGG-TATGTTCATTCACGCAACACCAACCCTCTT 104340 | | || ||| | | |||| || ||| || | ||||| | |||||||| || Sbjct 1511 ATAAATACTTACAATTTGCTGTCTGAAAAATATTTT-ACACACGCCAGCCCAACCCTGTT 1569 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 | |||| |||||| | || ||| |||| ||| || ||| | || | || || || Sbjct 1570 CTCAGCTGCCACACCACGGCCACAATTGTCATCTTGTTTTCTTGTAGCTATGAAAGATGA 1629 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 | || | ||||| |||| ||| | | | ||||||| || || || | ||||| Sbjct 1630 CAGTATTGAAGGTATATATGATACTTTAAAACAATGTGCGCTTATATCTAAATCTGCTGG 1689 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 || || || | ||| | || | | ||||| || ||| ||| || ||||| Sbjct 1690 TGGAATCGGAGTCCACGTTCACTGTATCAGAGCTAAAGGATCATATATCGCAGGCACAAA 1749 Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580 |||| ||| | || | | ||||||||| | || | ||| |||||| | ||||| Sbjct 1750 TGGTGTATCTAACGGACTCGTGCCAATGCTTAGGGTTTACAACAACACAGCAAGATATGT 1809 Query 104581 AAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGC 104637 | |||||| ||| | || ||| || | ||||| ||| | ||||| ||||| || Sbjct 1810 AGATCAAGGTGGAAATAAACGCCCCGGAGCTTTTGCAGTGTATTTAGAGCCTTGGCATGC 1869 Query 104638 GGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAA----GGTGACGAGGAGGCGCGGT 104693 || || | || || || || | || || || || | || || | || Sbjct 1870 AGACATTTTTGAATTTCTCGA----CCTCAAAAAGAACACTGGCAAAGAAGAAGTACGAG 1925 Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 || || | || | ||| | ||||| || ||||| || ||||| |||||||| | | Sbjct 1926 CTCGAGAGTTGTTTTATGCTTTATGGATACCGGATCTTTTTATGAAAAGAGTTGAAAAAA 1985 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGA-TGCCGTGGGT 104812 || | ||| ||| | ||||| | | ||||| | | || || | ||| Sbjct 1986 ATGAAGACTGGAGTCTTATGTGTCCTCATGATTGTCCTGGATTAGCTGACTGTTG-GGGA 2044 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTG 104872 || || || ||| || || | | ||||| ||||| || || || | | Sbjct 2045 GATGAATTCGAAAATCTATATGAACAATACGAAAAAGAAAAGCGTTTTG-TGAAACAG-G 2102 Query 104873 CCAGCTGCCGA--TGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930 |||| || | | | |||||||| || || | | ||| || || || ||||| | Sbjct 2103 TCAGCGCCCAAGTTTTATGGAAAGCCATAATCGAAGCCCAAGTTGAAACGGGAACACCCT 2162 Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990 | ||||||||||||||||| |||||| || ||||| |||||||| || || || | Sbjct 2163 ATATGCTTTACAAAGACGCTTGTAACAGGAAAAGTAACCAAAAGAACTTAGGCACTATAA 2222 Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGA-GACG--GCTG 105047 | || || | || || || ||| | |||| || | | || ||| || | || | Sbjct 2223 AATGTAGTAACTTATGCACTGAGATCGTTGAATACAC-GTC--AGCTGACGAAGTCGCGG 2279 Query 105048 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTG 105107 ||||||| | ||||| || ||| | || || ||| || ||| || |||| | Sbjct 2280 TGTGTAATTTAGCATCTATTGCTTTGAACATGTTTGTTAATGAAGA---TAAAACATATA 2336 Query 105108 ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTG 105167 ||| | | ||| | | ||||| || |||| | | || ||||| |||| | | | |||| Sbjct 2337 ATTTTAATAAATTAAAAGAAGTCACCAAAATTATTACTCAAAACTTAAATAAAATCATTG 2396 Query 105168 ATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 105227 || ||||| || || | | || | ||||| |||||||| || | || || | Sbjct 2397 ATGTTAATTTCTATCCGATCCCGGAGGCAAGAAAATCAAATATGAGGCATAGGCCTATAG 2456 Query 105228 GTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGT-CGCCACGCATTTGATTCC 105286 | | |||||||| || || || ||| ||| |||| | ||| |||| ||| Sbjct 2457 GAATTGGTGTTCAAGGGCTAGCAGATACATT-TGTCTTGATGCGCATTGCATATGAAAGT 2515 Query 105287 GACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAG 105346 || | ||||| | || | ||| | |||||||| ||||| ||| ||| || || || Sbjct 2516 GATGCAGCGATGAAACTTAATCAACAAATATTTGAAACCATTTATTACGGGGCACTAGAA 2575 Query 105347 GCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCT 105406 || |||| || | ||||| |||| ||||| || | || || ||| | Sbjct 2576 GCTAGTTGTGAACTTGCAGAAAAGTATGGGGTTTATGACACTTACGAAGGAAGCCCATCC 2635 Query 105407 TCACAAGGGGTGCTTCAATTTGATATGTGG---GAAGGTGAGACCAAGCTTCACTACGAC 105463 ||||| | | |||| || |||||| || ||| | ||| | || Sbjct 2636 AGTCAAGGTATATTACAATACGACATGTGGAGCAAAACCCCCACCGACCTT---TGGAAC 2692 Query 105464 TGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCT 105523 ||||| ||| | || ||| | || || | ||| | | || | | | | ||| Sbjct 2693 TGGGATGCTTTAAAAGAAAGAATTTCTAAGCATGGTTTGAGAAATTCTTTATTATTAGCT 2752 Query 105524 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTAC 105583 || ||||||||||| ||||| || ||||| | ||||| ||||||| |||||||| | | Sbjct 2753 CCTATGCCAACAGCATCCACGGCTCAAATTCTTGGTAACAATGAATCATTTGAACCTTTC 2812 Query 105584 ACGACGAACATCTATCTGAGAAGA 105607 || | || || || | |||||| Sbjct 2813 ACATCAAATATATACCAAAGAAGA 2836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581459522962120