Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq38475 86.0 5e-12 >seq38475 Length=2156 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/209 (71%), Gaps = 7/209 (3%) Strand=Plus/Plus Query 111775 AAACCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGC 111834 ||||| || | ||||||||||||| ||| || ||| ||||| || || |||||||| Sbjct 1562 AAACCTGTCAGATGTGCAATCATGTGTGTAAGAAGAGAATAACTTGCTATATTAAATGGT 1621 Query 111835 ACACCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGAT-AGTTTATTTTGTGA 111893 || ||||| |||||||| | |||||| |||| | ||||||| | ||| || | Sbjct 1622 ACTCCTAGACCCATATCAGCACTTCTTTGGTATAACAAACATGATAACTTTCCACTG-GC 1680 Query 111894 CACATAAAATTGA-CAAAGTACATGACAAGGAGGCAATGCCATCCCATTCATA---AAGG 111949 |||| ||||||| | || | |||||| ||||| | ||||| | ||| | | | Sbjct 1681 AACATGAAATTGAGCCAAACA-ATGACATGGAGGAAGGGCCATTTTACTCAAATCTGATG 1739 Query 111950 GTCCCCATGCACACATGATCATCCTTCTG 111978 | ||||||||| || | ||| |||||| Sbjct 1740 GATTCCATGCACATATTAACATTCTTCTG 1768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 390765420320269