Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq150777 86.0 7e-12 >seq150777 Length=2435 Score = 86.0 bits (94), Expect = 7e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088 ||||| ||||| |||| |||||||| |||||||| || || ||||| || ||||| Sbjct 342 GTGAAAATGTAACGGGGGCTGGCCGAGTCCTTGCCCCCGCACAAACGCGTACCGAACTGA 283 Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148 || ||||| | ||| |||| |||||| | || ||| | ||||| || | ||||||| Sbjct 282 CCGCGCGGCTCTAAGAGATTGATGTTGTTCGATCCAACGTAGTTCTGGGCGAGATTCACA 223 Query 152149 ATCGT 152153 ||||| Sbjct 222 ATCGT 218 Score = 86.0 bits (94), Expect = 7e-12 Identities = 96/126 (76%), Gaps = 2/126 (2%) Strand=Plus/Minus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCA-AGACGCGTACCGAATTG 117363 |||||||||||||| | ||| || | |||||||| || ||| | |||||||||||| || Sbjct 342 GTGAAAATGTAACGGGGGCTGGCCGAGTCCTTGCCCCC-GCACAAACGCGTACCGAACTG 284 Query 117364 TCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGAC 117423 || | |||||| ||||| || | |||||| | || || |||| || || | || || Sbjct 283 ACCGCGCGGCTCTAAGAGATTGATGTTGTTCGATCCAACGTAGTTCTGGGCGAGATTCAC 224 Query 117424 AATCGT 117429 |||||| Sbjct 223 AATCGT 218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545526039667400