Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq67196 188 8e-43 seq193007 152 6e-32 seq15021 104 3e-17 >seq67196 Length=1848 Score = 188 bits (208), Expect = 8e-43 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| || || ||||| ||||| |||||||| ||||| |||||| || Sbjct 694 ATGCAGATCTTTGTTAAAACCCTTACTGGCAAAACTATTACACTTGAAGTTGAGCCATCG 635 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | |||||||||||||| || ||||| || || || ||||||||| Sbjct 634 GACACAATTGAAAACGTTAAGGCTAAAATTCAAGATAAGGAAGGGATCCCCCCAGACCAG 575 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | ||||||||||| || ||||| || |||| ||||||||| | ||||| ||| Sbjct 574 CAGAGAATGATTTTTGCTGGCAAACAACTTGAAGATGGGCGTACCCTATCTGACTACAAT 515 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || || ||||| ||| | |||||||| ||||||| || ||||| Sbjct 514 ATTCAGAAAGAATCTACTTTGCATCTAGTACTGCGTCTGCGTGGTGG 468 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| || || | || || || ||||||||||| ||||| ||| || Sbjct 238 ATGCAGATCTTTGTTAAAACCTTGACTGGTAAAACTATTACTCTAGAGGTAGAGCCATCA 179 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | || || || ||||| || |||||||| || || ||||||||| Sbjct 178 GACACTATTGAGAATGTAAAAGCCAAGATTCAAGATAAGGAGGGGATCCCCCCAGACCAG 119 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || ||||| ||||| || ||||| || |||| || |||||| | ||||| ||| Sbjct 118 CAGAGACTGATTTTCGCTGGCAAACAACTTGAAGATGGGCGCACCCTATCTGACTACAAT 59 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || || ||||| ||| | ||||| || ||||||| || ||||| Sbjct 58 ATTCAGAAAGAATCTACTTTGCATCTTGTACTGCGTCTCCGTGGTGG 12 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 |||||||| || || || || || | || || || || || || | || || || | Sbjct 925 ATAATGCAGATTTTCGTGAAAACTTTGACTGGAAAAACGATCACCTTGGAAGTCGAACCT 866 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 |||| || | || | || ||||| ||||||||||| || || || || ||||| Sbjct 865 TCAGATACTATCGAGAACGTTAAAGCTAAGATTCAGGACAAAGAAGGTATCCCCCCAGAT 806 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 ||||||||||| ||||||||||| ||||| | || || | ||||| | |||| || Sbjct 805 CAGCAGCGTCTGATTTTTGCTGGAAAGCAGTTGGAAGACGGCCGTACTTTGTCAGATTAC 746 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||| | ||||| ||||||||| | ||||| || | || |||||||| || Sbjct 745 AATATTCAAAAAGAATCCACTTTACATCTTGTTCTACGACTTCGCGGAGG 696 >seq193007 Length=659 Score = 152 bits (168), Expect = 6e-32 Identities = 152/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| ||||| ||||| ||||| ||| | || ||||| || Sbjct 630 ATGCAGATCTTTGTCAAGACACTTACTGGCAAAACTATCACTTTAGAAGTTGAACCATCG 571 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | || || |||||||| ||||| || || ||||| |||||||| Sbjct 570 GACACTATTGAGAATGTCAAAGCCAAAATTCAAGACAAAGAAGGTATTCCCCCAGACCAA 511 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || |||||||| || ||||| || |||| || || ||| | ||||| ||| Sbjct 510 CAGCGTCTTATCTTTGCTGGAAAACAACTTGAAGATGGACGCACACTATCCGACTACAAT 451 Query 27586 GTCCAAAAGGAATCCAC 27602 |||| || ||||| || Sbjct 450 ATCCAGAAAGAATCTAC 434 >seq15021 Length=1916 Score = 104 bits (114), Expect = 3e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 27402 TATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTC 27461 || |||||| || || || || || || || || ||||| || || || ||||| ||| | Sbjct 724 TACAATGCAGATATTCGTAAAAACCCTAACGGGGAAGACCATCACCCTAGAGGTGGAGGC 783 Query 27462 AGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGA 27521 || | || | |||| |||| || || ||||| || || ||||| |||||||| || Sbjct 784 TTCCGACACTATAGAAAATGTGAAAGCCAAGATTCAAGATAAAGAGGGTATTCCTCCTGA 843 Query 27522 CCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTA 27581 || || || | || ||||||||||| ||| | || || | || || || | || || Sbjct 844 TCAACAACGATTGATCTTTGCTGGTAAACAATTGGAAGACGGCCGCACACTTTCTGATTA 903 Query 27582 TAATGTCCAAAAGGAATCCACTCTTCA 27608 ||| | || || ||||| |||||||| Sbjct 904 CAATATTCAGAAAGAATCTACTCTTCA 930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568549117520560