Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq67196 188 8e-43
seq193007 152 6e-32
seq15021 104 3e-17
>seq67196
Length=1848
Score = 188 bits (208), Expect = 8e-43
Identities = 178/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| || || ||||| ||||| |||||||| ||||| |||||| ||
Sbjct 694 ATGCAGATCTTTGTTAAAACCCTTACTGGCAAAACTATTACACTTGAAGTTGAGCCATCG 635
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | |||||||||||||| || ||||| || || || |||||||||
Sbjct 634 GACACAATTGAAAACGTTAAGGCTAAAATTCAAGATAAGGAAGGGATCCCCCCAGACCAG 575
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | ||||||||||| || ||||| || |||| ||||||||| | ||||| |||
Sbjct 574 CAGAGAATGATTTTTGCTGGCAAACAACTTGAAGATGGGCGTACCCTATCTGACTACAAT 515
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || || ||||| ||| | |||||||| ||||||| || |||||
Sbjct 514 ATTCAGAAAGAATCTACTTTGCATCTAGTACTGCGTCTGCGTGGTGG 468
Score = 158 bits (174), Expect = 1e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| || || | || || || ||||||||||| ||||| ||| ||
Sbjct 238 ATGCAGATCTTTGTTAAAACCTTGACTGGTAAAACTATTACTCTAGAGGTAGAGCCATCA 179
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | || || || ||||| || |||||||| || || |||||||||
Sbjct 178 GACACTATTGAGAATGTAAAAGCCAAGATTCAAGATAAGGAGGGGATCCCCCCAGACCAG 119
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || ||||| ||||| || ||||| || |||| || |||||| | ||||| |||
Sbjct 118 CAGAGACTGATTTTCGCTGGCAAACAACTTGAAGATGGGCGCACCCTATCTGACTACAAT 59
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || || ||||| ||| | ||||| || ||||||| || |||||
Sbjct 58 ATTCAGAAAGAATCTACTTTGCATCTTGTACTGCGTCTCCGTGGTGG 12
Score = 118 bits (130), Expect = 1e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462
|||||||| || || || || || | || || || || || || | || || || |
Sbjct 925 ATAATGCAGATTTTCGTGAAAACTTTGACTGGAAAAACGATCACCTTGGAAGTCGAACCT 866
Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
|||| || | || | || ||||| ||||||||||| || || || || |||||
Sbjct 865 TCAGATACTATCGAGAACGTTAAAGCTAAGATTCAGGACAAAGAAGGTATCCCCCCAGAT 806
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
||||||||||| ||||||||||| ||||| | || || | ||||| | |||| ||
Sbjct 805 CAGCAGCGTCTGATTTTTGCTGGAAAGCAGTTGGAAGACGGCCGTACTTTGTCAGATTAC 746
Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
||| | ||||| ||||||||| | ||||| || | || |||||||| ||
Sbjct 745 AATATTCAAAAAGAATCCACTTTACATCTTGTTCTACGACTTCGCGGAGG 696
>seq193007
Length=659
Score = 152 bits (168), Expect = 6e-32
Identities = 152/197 (77%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| ||||| ||||| ||||| ||| | || ||||| ||
Sbjct 630 ATGCAGATCTTTGTCAAGACACTTACTGGCAAAACTATCACTTTAGAAGTTGAACCATCG 571
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | || || |||||||| ||||| || || ||||| ||||||||
Sbjct 570 GACACTATTGAGAATGTCAAAGCCAAAATTCAAGACAAAGAAGGTATTCCCCCAGACCAA 511
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || |||||||| || ||||| || |||| || || ||| | ||||| |||
Sbjct 510 CAGCGTCTTATCTTTGCTGGAAAACAACTTGAAGATGGACGCACACTATCCGACTACAAT 451
Query 27586 GTCCAAAAGGAATCCAC 27602
|||| || ||||| ||
Sbjct 450 ATCCAGAAAGAATCTAC 434
>seq15021
Length=1916
Score = 104 bits (114), Expect = 3e-17
Identities = 147/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 27402 TATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTC 27461
|| |||||| || || || || || || || || ||||| || || || ||||| ||| |
Sbjct 724 TACAATGCAGATATTCGTAAAAACCCTAACGGGGAAGACCATCACCCTAGAGGTGGAGGC 783
Query 27462 AGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGA 27521
|| | || | |||| |||| || || ||||| || || ||||| |||||||| ||
Sbjct 784 TTCCGACACTATAGAAAATGTGAAAGCCAAGATTCAAGATAAAGAGGGTATTCCTCCTGA 843
Query 27522 CCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTA 27581
|| || || | || ||||||||||| ||| | || || | || || || | || ||
Sbjct 844 TCAACAACGATTGATCTTTGCTGGTAAACAATTGGAAGACGGCCGCACACTTTCTGATTA 903
Query 27582 TAATGTCCAAAAGGAATCCACTCTTCA 27608
||| | || || ||||| ||||||||
Sbjct 904 CAATATTCAGAAAGAATCTACTCTTCA 930
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 568549117520560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |