Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq174000 154 9e-33
seq67196 98.7 6e-16
seq193007 87.8 1e-12
>seq174000
Length=6590
Score = 154 bits (170), Expect = 9e-33
Identities = 198/273 (73%), Gaps = 0/273 (0%)
Strand=Plus/Minus
Query 47100 AATATTCATCTGAAGCTGCTCGTTTGAACACTTTTAAAGATTGGCCTCGTGGTTTGCGTC 47159
|||| |||| ||||| || || | | || || |||||||||||| | | | ||||
Sbjct 3158 AATACGCATCGGAAGCCGCCCGCATCAGCAGCTTCAAAGATTGGCCTAGATCTATCCGTC 3099
Query 47160 AGAGACCAAAAGAGTTAGCGGACGCGGGCTTCTTTTATACTGGTGAAGGTGATAAAACGA 47219
||| ||| |||| ||||| || || |||||||||||||| || ||||||| || || |
Sbjct 3098 AGAAACCGGAAGATTTAGCCGAGGCCGGCTTCTTTTATACAGGACAAGGTGACAAGACCA 3039
Query 47220 AGTGTTATTATTGTGATGGTGGTCTGAGAGATTGGAACGAAGAAGATATACCTTGGGAGG 47279
| || | ||||||||| || ||||| | ||||||| | | || || ||||| ||||| |
Sbjct 3038 AATGCTTTTATTGTGACGGCGGTCTTAAAGATTGGGAAAACGATGACATACCGTGGGAAG 2979
Query 47280 AGCACGCTCGTTGGTTTGATCGTTGTGTCTACGTTAAATTGGTAAAAGGAGAAGATTTTA 47339
| ||||| || ||||| ||| |||| ||| | | | ||||| || ||||||
Sbjct 2978 AACACGCACGATGGTTCAGTCGATGTGCCTATCTCCAGCTTGTAAAGGGTAAAGATTACG 2919
Query 47340 TTCAAAGAGTTAAATCGGAAGCGTGTCTAATCA 47372
| ||||||||||| | ||||| || | ||||
Sbjct 2918 TCCAAAGAGTTAACACAGAAGCCTGCATGATCA 2886
Score = 132 bits (146), Expect = 3e-26
Identities = 130/168 (77%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 46828 ATGGCCCGTCACTTTTATTACACCCGAAGTGATGGCACGTAACGGATTTTATTATCTTGG 46887
|||||| | |||||| | | ||||| | ||||||| ||||| || || || || ||
Sbjct 3451 ATGGCCTTTAACTTTTCTGTCCCCCGAGTTACTGGCACGCAACGGCTTCTACTACCTAGG 3392
Query 46888 AAGAGGTGATGAAGTTCGATGCGCCTTTTGCAAGGTTGAGATCATGCGTTGGGAAGAGGG 46947
|| |||||||||||||| || || ||||||||||||||||||||||| ||||| || ||
Sbjct 3391 CAGGGGTGATGAAGTTCGTTGTGCTTTTTGCAAGGTTGAGATCATGCGGTGGGAGGAAGG 3332
Query 46948 TGATGATCCTGCCGAAGACCATAAACGTTGGGCTCCTCAGTGTCCGTT 46995
|| || || || | ||| ||| |||| ||||| ||||| || || ||
Sbjct 3331 GGACGACCCCGCTGCAGATCATCAACGGTGGGCGCCTCAATGCCCCTT 3284
>seq67196
Length=1848
Score = 98.7 bits (108), Expect = 6e-16
Identities = 157/221 (71%), Gaps = 6/221 (3%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||||| || | ||| | ||| || || ||||| || || || || || || |||
Sbjct 477 AGACGCAGTACTAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGATAGGGTACGC 536
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| |||||||||||||| || ||||| || | | ||| ||||| || || | || |||
Sbjct 537 CCATCTTCAAGTTGTTTGCCAGCAAAAATCATTCTCTGCTGGTCTGGGGGGATCCCTTCC 596
Query 34609 TTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCT--CTCCACTTCCACG 34665
|| ||| ||| ||| | |||||| | ||||||||| || | ||| ||||| |
Sbjct 597 TTATCT-TGAATTTTAGCCTTAACGTTTTCAATTGTGTC--CGATGGCTCAACTTCAAGT 653
Query 34666 GTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || ||||| || || | ||||| ||||| ||||||||
Sbjct 654 GTAATAGTTTTGCCAGTAAGGGTTTTAACAAAGATCTGCAT 694
Score = 95.1 bits (104), Expect = 8e-15
Identities = 154/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||||| || | ||| | ||| || || ||||| || || || || || || |||
Sbjct 21 AGACGCAGTACAAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGATAGGGTGCGC 80
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| |||||||||||||| || || || || | | ||| ||||| || || | ||||||
Sbjct 81 CCATCTTCAAGTTGTTTGCCAGCGAAAATCAGTCTCTGCTGGTCTGGGGGGATCCCCTCC 140
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCT--TCGCTCTCCACTTCCACGG 34666
|| ||| ||||| ||||| ||| |||||| | ||||| || || | |
Sbjct 141 TTATCTTGAATCTTGGCTTTTACATTCTCAATAGTGTCTGATGGCTCT--ACCTCTAGAG 198
Query 34667 TTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || |||||||| || || ||||| ||||| ||||||||
Sbjct 199 TAATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 238
Score = 95.1 bits (104), Expect = 8e-15
Identities = 178/259 (69%), Gaps = 2/259 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | ||| || | || | ||| | |||| || |||||||| || ||||||||
Sbjct 696 CCTCCGCGAAGTCGTAGAACAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGAC 755
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| || || ||||||| | || || || ||||| || | |||||| || || || ||
Sbjct 756 AAAGTACGGCCGTCTTCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGG 815
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658
| || || ||||| ||||| | ||||||| | || || ||| || ||
Sbjct 816 ATACCTTCTTTGTCCTGAATCTTA-GCTTTAACGTTCTCGATAGTATCTGAAGGTTCGAC 874
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATTGTATG 34718
||||| ||| |||||||| || || || |||||||| ||||||||||| ||| | |
Sbjct 875 TTCCAAGGTGATCGTTTTTCCAGTCAAAGTTTTCACGAAAATCTGCATTATGAATCTGCA 934
Query 34719 ACGTTGAAAAAGATCGTTA 34737
|| ||||| || | ||||
Sbjct 935 ACAATGAAATAGTTTGTTA 953
>seq193007
Length=659
Score = 87.8 bits (96), Expect = 1e-12
Identities = 139/195 (71%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575
|| || || || || || || || ||||| || | |||||||||||||| || |||||
Sbjct 440 TCTTTCTGGATATTGTAGTCGGATAGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCAAAG 499
Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635
|| | |||||||||||| || || | || || |||||| ||| ||| | ||| || |
Sbjct 500 ATAAGACGCTGTTGGTCTGGGGGAATACCTTCTTTGTCT-TGAATTTTGGCTTTGACATT 558
Query 34636 -AAAATTGTGTCTTCGCT--CTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTC 34692
||| ||||| || | || ||||| | || || ||||| || || | || ||
Sbjct 559 CTCAATAGTGTC--CGATGGTTCAACTTCTAAAGTGATAGTTTTGCCAGTAAGTGTCTTG 616
Query 34693 ACAAAAATCTGCATG 34707
||||| |||||||||
Sbjct 617 ACAAAGATCTGCATG 631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 313781923897679
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |