Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq174000 154 9e-33 seq67196 98.7 6e-16 seq193007 87.8 1e-12 >seq174000 Length=6590 Score = 154 bits (170), Expect = 9e-33 Identities = 198/273 (73%), Gaps = 0/273 (0%) Strand=Plus/Minus Query 47100 AATATTCATCTGAAGCTGCTCGTTTGAACACTTTTAAAGATTGGCCTCGTGGTTTGCGTC 47159 |||| |||| ||||| || || | | || || |||||||||||| | | | |||| Sbjct 3158 AATACGCATCGGAAGCCGCCCGCATCAGCAGCTTCAAAGATTGGCCTAGATCTATCCGTC 3099 Query 47160 AGAGACCAAAAGAGTTAGCGGACGCGGGCTTCTTTTATACTGGTGAAGGTGATAAAACGA 47219 ||| ||| |||| ||||| || || |||||||||||||| || ||||||| || || | Sbjct 3098 AGAAACCGGAAGATTTAGCCGAGGCCGGCTTCTTTTATACAGGACAAGGTGACAAGACCA 3039 Query 47220 AGTGTTATTATTGTGATGGTGGTCTGAGAGATTGGAACGAAGAAGATATACCTTGGGAGG 47279 | || | ||||||||| || ||||| | ||||||| | | || || ||||| ||||| | Sbjct 3038 AATGCTTTTATTGTGACGGCGGTCTTAAAGATTGGGAAAACGATGACATACCGTGGGAAG 2979 Query 47280 AGCACGCTCGTTGGTTTGATCGTTGTGTCTACGTTAAATTGGTAAAAGGAGAAGATTTTA 47339 | ||||| || ||||| ||| |||| ||| | | | ||||| || |||||| Sbjct 2978 AACACGCACGATGGTTCAGTCGATGTGCCTATCTCCAGCTTGTAAAGGGTAAAGATTACG 2919 Query 47340 TTCAAAGAGTTAAATCGGAAGCGTGTCTAATCA 47372 | ||||||||||| | ||||| || | |||| Sbjct 2918 TCCAAAGAGTTAACACAGAAGCCTGCATGATCA 2886 Score = 132 bits (146), Expect = 3e-26 Identities = 130/168 (77%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 46828 ATGGCCCGTCACTTTTATTACACCCGAAGTGATGGCACGTAACGGATTTTATTATCTTGG 46887 |||||| | |||||| | | ||||| | ||||||| ||||| || || || || || Sbjct 3451 ATGGCCTTTAACTTTTCTGTCCCCCGAGTTACTGGCACGCAACGGCTTCTACTACCTAGG 3392 Query 46888 AAGAGGTGATGAAGTTCGATGCGCCTTTTGCAAGGTTGAGATCATGCGTTGGGAAGAGGG 46947 || |||||||||||||| || || ||||||||||||||||||||||| ||||| || || Sbjct 3391 CAGGGGTGATGAAGTTCGTTGTGCTTTTTGCAAGGTTGAGATCATGCGGTGGGAGGAAGG 3332 Query 46948 TGATGATCCTGCCGAAGACCATAAACGTTGGGCTCCTCAGTGTCCGTT 46995 || || || || | ||| ||| |||| ||||| ||||| || || || Sbjct 3331 GGACGACCCCGCTGCAGATCATCAACGGTGGGCGCCTCAATGCCCCTT 3284 >seq67196 Length=1848 Score = 98.7 bits (108), Expect = 6e-16 Identities = 157/221 (71%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| || | ||| | ||| || || ||||| || || || || || || ||| Sbjct 477 AGACGCAGTACTAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGATAGGGTACGC 536 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | |||||||||||||| || ||||| || | | ||| ||||| || || | || ||| Sbjct 537 CCATCTTCAAGTTGTTTGCCAGCAAAAATCATTCTCTGCTGGTCTGGGGGGATCCCTTCC 596 Query 34609 TTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCT--CTCCACTTCCACG 34665 || ||| ||| ||| | |||||| | ||||||||| || | ||| ||||| | Sbjct 597 TTATCT-TGAATTTTAGCCTTAACGTTTTCAATTGTGTC--CGATGGCTCAACTTCAAGT 653 Query 34666 GTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || ||||| || || | ||||| ||||| |||||||| Sbjct 654 GTAATAGTTTTGCCAGTAAGGGTTTTAACAAAGATCTGCAT 694 Score = 95.1 bits (104), Expect = 8e-15 Identities = 154/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| || | ||| | ||| || || ||||| || || || || || || ||| Sbjct 21 AGACGCAGTACAAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGATAGGGTGCGC 80 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | |||||||||||||| || || || || | | ||| ||||| || || | |||||| Sbjct 81 CCATCTTCAAGTTGTTTGCCAGCGAAAATCAGTCTCTGCTGGTCTGGGGGGATCCCCTCC 140 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCT--TCGCTCTCCACTTCCACGG 34666 || ||| ||||| ||||| ||| |||||| | ||||| || || | | Sbjct 141 TTATCTTGAATCTTGGCTTTTACATTCTCAATAGTGTCTGATGGCTCT--ACCTCTAGAG 198 Query 34667 TTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || |||||||| || || ||||| ||||| |||||||| Sbjct 199 TAATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 238 Score = 95.1 bits (104), Expect = 8e-15 Identities = 178/259 (69%), Gaps = 2/259 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||| || | || | ||| | |||| || |||||||| || |||||||| Sbjct 696 CCTCCGCGAAGTCGTAGAACAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGAC 755 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || || ||||||| | || || || ||||| || | |||||| || || || || Sbjct 756 AAAGTACGGCCGTCTTCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGG 815 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658 | || || ||||| ||||| | ||||||| | || || ||| || || Sbjct 816 ATACCTTCTTTGTCCTGAATCTTA-GCTTTAACGTTCTCGATAGTATCTGAAGGTTCGAC 874 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATTGTATG 34718 ||||| ||| |||||||| || || || |||||||| ||||||||||| ||| | | Sbjct 875 TTCCAAGGTGATCGTTTTTCCAGTCAAAGTTTTCACGAAAATCTGCATTATGAATCTGCA 934 Query 34719 ACGTTGAAAAAGATCGTTA 34737 || ||||| || | |||| Sbjct 935 ACAATGAAATAGTTTGTTA 953 >seq193007 Length=659 Score = 87.8 bits (96), Expect = 1e-12 Identities = 139/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 || || || || || || || || ||||| || | |||||||||||||| || ||||| Sbjct 440 TCTTTCTGGATATTGTAGTCGGATAGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCAAAG 499 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 || | |||||||||||| || || | || || |||||| ||| ||| | ||| || | Sbjct 500 ATAAGACGCTGTTGGTCTGGGGGAATACCTTCTTTGTCT-TGAATTTTGGCTTTGACATT 558 Query 34636 -AAAATTGTGTCTTCGCT--CTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTC 34692 ||| ||||| || | || ||||| | || || ||||| || || | || || Sbjct 559 CTCAATAGTGTC--CGATGGTTCAACTTCTAAAGTGATAGTTTTGCCAGTAAGTGTCTTG 616 Query 34693 ACAAAAATCTGCATG 34707 ||||| ||||||||| Sbjct 617 ACAAAGATCTGCATG 631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 313781923897679