Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq131719 174 1e-38 seq193007 141 8e-29 seq67196 127 2e-24 seq15021 125 6e-24 >seq131719 Length=2163 Score = 174 bits (192), Expect = 1e-38 Identities = 337/492 (68%), Gaps = 8/492 (2%) Strand=Plus/Minus Query 54061 GGATTGGCACCGTTTCCGCCAGGAAACTCCCAATCGACGTCGACACCATCAAAAAATTTC 54120 || || || || || || ||||| ||||||||||||| ||||| || ||||| |||||| Sbjct 2047 GGGTTAGCGCCTTTACCTCCAGGGAACTCCCAATCGATATCGACGCCGTCAAAGAATTTC 1988 Query 54121 CACGTCAATAGGAATTCGCGCACGGAATCCACAAACACTTTGCGTTTGGAAGAATC-GTG 54179 || ||| ||||| || |||||| | || || | || || | || ||| Sbjct 1987 CAGGTCTGGAGGAAGTCTTTTACGGAAGCAACGAAACGGTCACGCTTTGTCTTGTCAGTG 1928 Query 54180 --GAAATGGTAAAACGGATCCGATAACGTCCAACCGCCGATTGACGGTAATACTTTGACG 54237 |||| | || ||||| | || ||||| ||||||| || || || | |||| | Sbjct 1927 AAGAAAAAG---AATGGATCAGCCAAAGTCCAGCCGCCGACGGAAGGCAAAATCTTGAGG 1871 Query 54238 TTGGGATTCGCTTTTTTCACGGCCATAATCTGTCCAAAATTGCCTTTATACGGTTCGTTC 54297 | || |||| | ||||| ||| | || || || || ||||| || ||||||||| Sbjct 1870 TCTGGTCTCGCCTGTTTCAACATCATCAGTTGGCCGAAGTTTCCTTTGTAAGGTTCGTTC 1811 Query 54298 CAGGCGGAGACGCCTTTTTGCGGTTTTTGCACCGCCGCCCAAGGATCATGGATGGCTACT 54357 || | || | ||| ||||| ||||| || | || ||||| || ||||| |||| ||| Sbjct 1810 CATGAAGAAAGGCCCTTTTGTGGTTTCTGAAGAGCGGCCCAGGGGTCATGAATGGACACT 1751 Query 54358 TTAAAATCCGACCGGCCAGCGCAAGATCTTTGTAGAGCTTCAAAACTGCCCGGTATAGTT 54417 || || || ||||| ||| || | || || || | ||||||||| || Sbjct 1750 TTGAAGTCTTCGCGGCCGCTGCAGGAACGCTGGAGTGCCTGGAAACTGCCCTCAATCTCC 1691 Query 54418 TTTAAACTGTCATTTATTCCGTCGCCGCCGCAAATTGGCACAAAACCGTACAAAAGATGC 54477 || | |||||| || || |||||||| ||||| || || | || |||||||| | || Sbjct 1690 TTCAGACTGTCGTTGATGCCGTCGCCTCCGCAGATCGGAATGAACCCGTACAACAAGTGA 1631 Query 54478 GTCAAATTAGGCACGGGCACTTTGTCCATTGGAAAATTTCGTCCG-TACACTCCCCATTC 54536 |||| ||| || | ||||| ||||| || || || | || | |||||||||||||| Sbjct 1630 GTCAGATTGGGGATCGGCACGCGGTCCACGGGGAACTTCC-TCGGATACACTCCCCATTC 1572 Query 54537 TACAAAATAGGC 54548 ||| || || || Sbjct 1571 TACGAAGTAAGC 1560 >seq193007 Length=659 Score = 141 bits (156), Expect = 8e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || || || || ||||| |||| ||| | ||||| ||||| || Sbjct 631 CATGCAGATCTTTGTCAAGACACTTACTGGCAAAACTATCACTTTAGAAGTTGAACCATC 572 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||||| |||||| |||||||||||||||||||| || || || || || Sbjct 571 GGACACTATTGAGAATGTCAAAGCCAAAATTCAAGACAAAGAAGGTATTCCCCCAGACCA 512 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||||| | || | || || |||||| | ||||| | || | ||||| ||||| Sbjct 511 ACAGCGTCTTATCTTTGCTGGAAAACAACTTGAAGATGGACGCACACTATCCGACTACAA 452 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || || || || || || || |||||| | || | || ||||| Sbjct 451 TATCCAGAAAGAATCTACATTGCACTTGGTTCTCCGCCTCCGTGGTGG 404 >seq67196 Length=1848 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| |||| || || |||| ||||| ||||| || || || Sbjct 466 ATGCAGATCTTTGTTAAAACCTTGACTGGTAAAACTATCACTCTAGAAGTTGAGCCATCT 407 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | |||||| || ||||| || || ||||| || || || |||||| Sbjct 406 GACACCATTGAAAATGTCAAAGCCAAGATTCAGGATAAGGAAGGTATTCCGCCAGATCAA 347 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | || || ||||| | ||||| | ||| | || || || || Sbjct 346 CAACGTCTGATCTTTGCTGGAAAACAGCTTGAAGATGGCCGCACCCTATCTGACTATAAT 287 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||| || || ||| | ||| ||||||||||| | || ||||| || Sbjct 286 ATCCAAAAAGAATCCACCCTTCATCTGGTTTTGCGTCTCCGTGGTGGTAT 237 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| || || ||||| ||||||| |||||||| || || || Sbjct 694 ATGCAGATCTTTGTTAAAACCCTTACTGGCAAAACTATTACACTTGAAGTTGAGCCATCG 635 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || ||||||||||| || ||||| || || || || || Sbjct 634 GACACAATTGAAAACGTTAAGGCTAAAATTCAAGATAAGGAAGGGATCCCCCCAGACCAG 575 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || ||||||||| | ||||| | ||| | || || ||||| Sbjct 574 CAGAGAATGATTTTTGCTGGCAAACAACTTGAAGATGGGCGTACCCTATCTGACTACAAT 515 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || || || || || ||| | || ||||| |||| ||||| || Sbjct 514 ATTCAGAAAGAATCTACTTTGCATCTAGTACTGCGTCTGCGTGGTGGTAT 465 Score = 118 bits (130), Expect = 9e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || |||||| |||| || || | || || | ||||| ||||| || Sbjct 922 ATGCAGATTTTCGTGAAAACTTTGACTGGAAAAACGATCACCTTGGAAGTCGAACCTTCA 863 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || |||| || ||| || ||||| ||||||||||| || || || ||||| Sbjct 862 GATACTATCGAGAACGTTAAAGCTAAGATTCAGGACAAAGAAGGTATCCCCCCAGATCAG 803 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || || || || ||||||||| | || | || |||||||| Sbjct 802 CAGCGTCTGATTTTTGCTGGAAAGCAGTTGGAAGACGGCCGTACTTTGTCAGATTACAAT 743 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 |||||||| || || || |||||| | ||| Sbjct 742 ATTCAAAAAGAATCCACTTTACATCTTGTT 713 >seq15021 Length=1916 Score = 125 bits (138), Expect = 6e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||||||||| |||||||| || || || ||| | || || || || ||||| | ||| Sbjct 728 ATGCAGATATTCGTAAAAACCCTAACGGGGAAGACCATCACCCTAGAGGTGGAGGCTTCC 787 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || ||| || |||||||| ||||| || || || || |||||| Sbjct 788 GACACTATAGAAAATGTGAAAGCCAAGATTCAAGATAAAGAGGGTATTCCTCCTGATCAA 847 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | || || ||||||||||||||| | || |||| |||||||| Sbjct 848 CAACGATTGATCTTTGCTGGTAAACAATTGGAAGACGGCCGCACACTTTCTGATTACAAT 907 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199 ||||| || || || || | || ||||| || Sbjct 908 ATTCAGAAAGAATCTACTCTTCACTTGGTGTT 939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433612016132759