Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq131719 174 1e-38
seq193007 141 8e-29
seq67196 127 2e-24
seq15021 125 6e-24
>seq131719
Length=2163
Score = 174 bits (192), Expect = 1e-38
Identities = 337/492 (68%), Gaps = 8/492 (2%)
Strand=Plus/Minus
Query 54061 GGATTGGCACCGTTTCCGCCAGGAAACTCCCAATCGACGTCGACACCATCAAAAAATTTC 54120
|| || || || || || ||||| ||||||||||||| ||||| || ||||| ||||||
Sbjct 2047 GGGTTAGCGCCTTTACCTCCAGGGAACTCCCAATCGATATCGACGCCGTCAAAGAATTTC 1988
Query 54121 CACGTCAATAGGAATTCGCGCACGGAATCCACAAACACTTTGCGTTTGGAAGAATC-GTG 54179
|| ||| ||||| || |||||| | || || | || || | || |||
Sbjct 1987 CAGGTCTGGAGGAAGTCTTTTACGGAAGCAACGAAACGGTCACGCTTTGTCTTGTCAGTG 1928
Query 54180 --GAAATGGTAAAACGGATCCGATAACGTCCAACCGCCGATTGACGGTAATACTTTGACG 54237
|||| | || ||||| | || ||||| ||||||| || || || | |||| |
Sbjct 1927 AAGAAAAAG---AATGGATCAGCCAAAGTCCAGCCGCCGACGGAAGGCAAAATCTTGAGG 1871
Query 54238 TTGGGATTCGCTTTTTTCACGGCCATAATCTGTCCAAAATTGCCTTTATACGGTTCGTTC 54297
| || |||| | ||||| ||| | || || || || ||||| || |||||||||
Sbjct 1870 TCTGGTCTCGCCTGTTTCAACATCATCAGTTGGCCGAAGTTTCCTTTGTAAGGTTCGTTC 1811
Query 54298 CAGGCGGAGACGCCTTTTTGCGGTTTTTGCACCGCCGCCCAAGGATCATGGATGGCTACT 54357
|| | || | ||| ||||| ||||| || | || ||||| || ||||| |||| |||
Sbjct 1810 CATGAAGAAAGGCCCTTTTGTGGTTTCTGAAGAGCGGCCCAGGGGTCATGAATGGACACT 1751
Query 54358 TTAAAATCCGACCGGCCAGCGCAAGATCTTTGTAGAGCTTCAAAACTGCCCGGTATAGTT 54417
|| || || ||||| ||| || | || || || | ||||||||| ||
Sbjct 1750 TTGAAGTCTTCGCGGCCGCTGCAGGAACGCTGGAGTGCCTGGAAACTGCCCTCAATCTCC 1691
Query 54418 TTTAAACTGTCATTTATTCCGTCGCCGCCGCAAATTGGCACAAAACCGTACAAAAGATGC 54477
|| | |||||| || || |||||||| ||||| || || | || |||||||| | ||
Sbjct 1690 TTCAGACTGTCGTTGATGCCGTCGCCTCCGCAGATCGGAATGAACCCGTACAACAAGTGA 1631
Query 54478 GTCAAATTAGGCACGGGCACTTTGTCCATTGGAAAATTTCGTCCG-TACACTCCCCATTC 54536
|||| ||| || | ||||| ||||| || || || | || | ||||||||||||||
Sbjct 1630 GTCAGATTGGGGATCGGCACGCGGTCCACGGGGAACTTCC-TCGGATACACTCCCCATTC 1572
Query 54537 TACAAAATAGGC 54548
||| || || ||
Sbjct 1571 TACGAAGTAAGC 1560
>seq193007
Length=659
Score = 141 bits (156), Expect = 8e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| || || || || ||||| |||| ||| | ||||| ||||| ||
Sbjct 631 CATGCAGATCTTTGTCAAGACACTTACTGGCAAAACTATCACTTTAGAAGTTGAACCATC 572
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | ||||||| |||||| |||||||||||||||||||| || || || || ||
Sbjct 571 GGACACTATTGAGAATGTCAAAGCCAAAATTCAAGACAAAGAAGGTATTCCCCCAGACCA 512
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||||||| | || | || || |||||| | ||||| | || | ||||| |||||
Sbjct 511 ACAGCGTCTTATCTTTGCTGGAAAACAACTTGAAGATGGACGCACACTATCCGACTACAA 452
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || || || || || || || |||||| | || | || |||||
Sbjct 451 TATCCAGAAAGAATCTACATTGCACTTGGTTCTCCGCCTCCGTGGTGG 404
>seq67196
Length=1848
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| ||||| |||| || || |||| ||||| ||||| || || ||
Sbjct 466 ATGCAGATCTTTGTTAAAACCTTGACTGGTAAAACTATCACTCTAGAAGTTGAGCCATCT 407
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | |||||| || ||||| || || ||||| || || || ||||||
Sbjct 406 GACACCATTGAAAATGTCAAAGCCAAGATTCAGGATAAGGAAGGTATTCCGCCAGATCAA 347
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||| | || | || || ||||| | ||||| | ||| | || || || ||
Sbjct 346 CAACGTCTGATCTTTGCTGGAAAACAGCTTGAAGATGGCCGCACCCTATCTGACTATAAT 287
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||| || || ||| | ||| ||||||||||| | || ||||| ||
Sbjct 286 ATCCAAAAAGAATCCACCCTTCATCTGGTTTTGCGTCTCCGTGGTGGTAT 237
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| ||||| || || ||||| ||||||| |||||||| || || ||
Sbjct 694 ATGCAGATCTTTGTTAAAACCCTTACTGGCAAAACTATTACACTTGAAGTTGAGCCATCG 635
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || ||||||||||| || ||||| || || || || ||
Sbjct 634 GACACAATTGAAAACGTTAAGGCTAAAATTCAAGATAAGGAAGGGATCCCCCCAGACCAG 575
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || ||||||||| | ||||| | ||| | || || |||||
Sbjct 574 CAGAGAATGATTTTTGCTGGCAAACAACTTGAAGATGGGCGTACCCTATCTGACTACAAT 515
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| || || || || || ||| | || ||||| |||| ||||| ||
Sbjct 514 ATTCAGAAAGAATCTACTTTGCATCTAGTACTGCGTCTGCGTGGTGGTAT 465
Score = 118 bits (130), Expect = 9e-22
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || |||||| |||| || || | || || | ||||| ||||| ||
Sbjct 922 ATGCAGATTTTCGTGAAAACTTTGACTGGAAAAACGATCACCTTGGAAGTCGAACCTTCA 863
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || |||| || ||| || ||||| ||||||||||| || || || |||||
Sbjct 862 GATACTATCGAGAACGTTAAAGCTAAGATTCAGGACAAAGAAGGTATCCCCCCAGATCAG 803
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | || || || || ||||||||| | || | || ||||||||
Sbjct 802 CAGCGTCTGATTTTTGCTGGAAAGCAGTTGGAAGACGGCCGTACTTTGTCAGATTACAAT 743
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197
|||||||| || || || |||||| | |||
Sbjct 742 ATTCAAAAAGAATCCACTTTACATCTTGTT 713
>seq15021
Length=1916
Score = 125 bits (138), Expect = 6e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||||||||| |||||||| || || || ||| | || || || || ||||| | |||
Sbjct 728 ATGCAGATATTCGTAAAAACCCTAACGGGGAAGACCATCACCCTAGAGGTGGAGGCTTCC 787
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || ||| || |||||||| ||||| || || || || ||||||
Sbjct 788 GACACTATAGAAAATGTGAAAGCCAAGATTCAAGATAAAGAGGGTATTCCTCCTGATCAA 847
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| || || || | || || ||||||||||||||| | || |||| ||||||||
Sbjct 848 CAACGATTGATCTTTGCTGGTAAACAATTGGAAGACGGCCGCACACTTTCTGATTACAAT 907
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199
||||| || || || || | || ||||| ||
Sbjct 908 ATTCAGAAAGAATCTACTCTTCACTTGGTGTT 939
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433612016132759
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |