Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq193007 149 4e-31
seq67196 145 5e-30
>seq193007
Length=659
Score = 149 bits (164), Expect = 4e-31
Identities = 161/211 (76%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || || || || || ||||| |||||| | |||||||| | ||
Sbjct 630 ATGCAGATCTTTGTCAAGACACTTACTGGCAAAACTATCACTTTAGAAGTTGAACCATCG 571
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| |||| ||| | ||| | |||| || |||||||||||| | || ||||| ||
Sbjct 570 GACACTATTGAGAATGTCAAAGCCAAAA-TTCAAGACAAAGAAGGTATTCCCCCAGACCA 512
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||||| | || ||||| || |||||||| ||||| | |||||| || ||| |||||
Sbjct 511 ACAGCGTCTTATCTTTGCTGGAAAACAACTTGAAGATGGACGCACACTATCCGACTACAA 452
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820
|| || ||||| || ||||| || || |||
Sbjct 451 TATCCAGAAAGAATCTACATTGCACTTGGTT 421
>seq67196
Length=1848
Score = 145 bits (160), Expect = 5e-30
Identities = 171/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
||||||||||||||| ||||| | || |||||||||||||| | ||||| || | |
Sbjct 923 AATGCAGATTTTCGTGAAAACTTTGACTGGAAAAACGATCACCTTGGAAGTCGAACCTTC 864
Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
|| ||| | || || ||||| | || | || |||||||||||| | || |||||||
Sbjct 863 AGATACTATCGAGAACGTTAAAGCTAAGA-TTCAGGACAAAGAAGGTATCCCCCCAGATC 805
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
| |||||| | || ||||| || || || ||||||||| || ||||| |||||||
Sbjct 804 AGCAGCGTCTGATTTTTGCTGGAAAGCAGTTGGAAGACGGCCGTACTTTGTCAGATTACA 745
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
| || |||||||| ||||| |||||| | ||| || | | || |||||
Sbjct 744 ATATTCAAAAAGAATCCACTTTACATCTTGTTCTACGACTTCGCGGAGG 696
Score = 131 bits (144), Expect = 1e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || ||||||||| | || || ||||| |||||||| |||||||| | |
Sbjct 466 ATGCAGATCTTTGTTAAAACCTTGACTGGTAAAACTATCACTCTAGAAGTTGAGCCATCT 407
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||||| | ||| || ||| || || |||||| | ||||||||||||
Sbjct 406 GACACCATTGAAAATGTCAAAGCCAAGATTCAGGATAAGGAAGGTATTCCGCCAGATCAA 347
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|| ||| | || ||||| || ||||| || ||||| | ||||| || || || ||
Sbjct 346 CAACGTCTGATCTTTGCTGGAAAACAGCTTGAAGATGGCCGCACCCTATCTGACTATAAT 287
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTT 23822
|| |||||||| ||||| | ||| | |||||
Sbjct 286 ATCCAAAAAGAATCCACCCTTCATCTGGTTTT 255
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || ||||||||||| || || ||||| || || || |||||||| | ||
Sbjct 694 ATGCAGATCTTTGTTAAAACCCTTACTGGCAAAACTATTACACTTGAAGTTGAGCCATCG 635
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||||| | || |||||| || || ||||| | || ||||| ||
Sbjct 634 GACACAATTGAAAACGTTAAGGCTAAAATTCAAGATAAGGAAGGGATCCCCCCAGACCAG 575
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | | || ||||| ||||||||||| ||||| | || || || || |||||
Sbjct 574 CAGAGAATGATTTTTGCTGGCAAACAACTTGAAGATGGGCGTACCCTATCTGACTACAAT 515
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGT 23819
|| || ||||| || || || ||| ||||
Sbjct 514 ATTCAGAAAGAATCTACTTTGCATCTAGT 486
Score = 93.3 bits (102), Expect = 3e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || ||||||||| | || || ||||| || ||||| || || || | |
Sbjct 238 ATGCAGATCTTTGTTAAAACCTTGACTGGTAAAACTATTACTCTAGAGGTAGAGCCATCA 179
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|||||| |||| | ||||| || ||| || || || || | || ||||| ||
Sbjct 178 GACACTATTGAGAATGTAAAAGCCAAGATTCAAGATAAGGAGGGGATCCCCCCAGACCAG 119
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | | || || || ||||||||||| ||||| | ||||| || || |||||
Sbjct 118 CAGAGACTGATTTTCGCTGGCAAACAACTTGAAGATGGGCGCACCCTATCTGACTACAAT 59
Query 23791 ATACAAAAAGAGTCCACATTACAT 23814
|| || ||||| || || || |||
Sbjct 58 ATTCAGAAAGAATCTACTTTGCAT 35
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 336991825948004
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |