Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq67196 156 1e-32 seq193007 127 5e-24 seq113071 93.3 1e-13 >seq67196 Length=1848 Score = 156 bits (172), Expect = 1e-32 Identities = 170/223 (76%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||||| || ||||| || | ||||||||||||||| | ||||||||| | |||||| Sbjct 702 CGAAGTCGTAGAACAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGACAAAGTA 761 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || ||||| | |||||| ||||| || || || || || || || || || |||||| Sbjct 762 CGGCCGTCTTCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGGATACCT 821 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCT-TCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 || ||||| || ||| || |||| | | | ||||| || ||||| | ||| || || || Sbjct 822 TCTTTGTCCTGAATC-TTAGCTTTAACGTTCTCGATAGTATCTGAAGGTTCGACTTCCAA 880 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 |||||||| || || ||||||||||| | ||| | |||||| Sbjct 881 GGTGATCGTTTTTCCAGTCAAAGTTTTCACGAAAATCTGCATT 923 Score = 140 bits (154), Expect = 8e-28 Identities = 155/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || || || || || |||||||||||||||| ||| || || | | || Sbjct 245 ACGGAGACGCAAAACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCAGATAGGGT 304 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| ||||| || ||||| ||||| || |||||||| || ||||||||||| Sbjct 305 GCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGCGGAATACC 364 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| || || ||||| || ||| ||| |||||||| || | || || |||| Sbjct 365 TTCCTTATCCTGAATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCAACTTCTAG 424 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698 ||||| || || || ||||| ||||| Sbjct 425 AGTGATAGTTTTACCAGTCAAGGTTTT 451 >seq193007 Length=659 Score = 127 bits (140), Expect = 5e-24 Identities = 134/174 (77%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 || |||||||| |||| |||||| |||| | || | |||||||| || || || ||| Sbjct 434 GTAGATTCTTTCTGGATATTGTAGTCGGATAGTGTGCGTCCATCTTCAAGTTGTTTTCCA 493 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC-TT 225635 || |||||||| || |||||||| || ||||||||||| |||||||| || ||| || || Sbjct 494 GCAAAGATAAGACGCTGTTGGTCTGGGGGAATACCTTCTTTGTCTTGAAT-TTTGGCTTT 552 Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 ||| || || ||||| || | ||| || ||||| ||||| || ||||| || Sbjct 553 GACATTCTCAATAGTGTCCGATGGTTCAACTTCTAAAGTGATAGTTTTGCCAGT 606 >seq113071 Length=4807 Score = 93.3 bits (102), Expect = 1e-13 Identities = 113/153 (74%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 7566 TATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGG 7625 |||| |||| || ||||| || |||||||||| || | ||||| || |||| || || Sbjct 3305 TATTGTTACAGCTCATGCATTCATTATGATTTT--TTATAGTTATACCAATTATAATTGG 3248 Query 7626 CGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAG 7685 || || ||||||||||| || || |||| | || | |||||||||||||| || | Sbjct 3247 TGGATTTGGAAATTGATTAGTACCCCTAATATTAGGAGTGCCTGATATGGCTTTCTCACG 3188 Query 7686 GCTTAACAATATAAGTTTTTGATTACTACCGCC 7718 | || |||| ||| |||||| || |||| || Sbjct 3187 AATAAATAATAAAAGATTTTGAATATTACCCCC 3155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1188756248821722