Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq67196 156 1e-32
seq193007 127 5e-24
seq113071 93.3 1e-13
>seq67196
Length=1848
Score = 156 bits (172), Expect = 1e-32
Identities = 170/223 (76%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||||| || ||||| || | ||||||||||||||| | ||||||||| | ||||||
Sbjct 702 CGAAGTCGTAGAACAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGACAAAGTA 761
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| || ||||| | |||||| ||||| || || || || || || || || || ||||||
Sbjct 762 CGGCCGTCTTCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGGATACCT 821
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCT-TCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|| ||||| || ||| || |||| | | | ||||| || ||||| | ||| || || ||
Sbjct 822 TCTTTGTCCTGAATC-TTAGCTTTAACGTTCTCGATAGTATCTGAAGGTTCGACTTCCAA 880
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
|||||||| || || ||||||||||| | ||| | ||||||
Sbjct 881 GGTGATCGTTTTTCCAGTCAAAGTTTTCACGAAAATCTGCATT 923
Score = 140 bits (154), Expect = 8e-28
Identities = 155/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | || || || || || |||||||||||||||| ||| || || | | ||
Sbjct 245 ACGGAGACGCAAAACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCAGATAGGGT 304
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| ||||| || ||||| ||||| || |||||||| || |||||||||||
Sbjct 305 GCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGCGGAATACC 364
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| || || ||||| || ||| ||| |||||||| || | || || ||||
Sbjct 365 TTCCTTATCCTGAATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCAACTTCTAG 424
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698
||||| || || || ||||| |||||
Sbjct 425 AGTGATAGTTTTACCAGTCAAGGTTTT 451
>seq193007
Length=659
Score = 127 bits (140), Expect = 5e-24
Identities = 134/174 (77%), Gaps = 2/174 (1%)
Strand=Plus/Plus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|| |||||||| |||| |||||| |||| | || | |||||||| || || || |||
Sbjct 434 GTAGATTCTTTCTGGATATTGTAGTCGGATAGTGTGCGTCCATCTTCAAGTTGTTTTCCA 493
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC-TT 225635
|| |||||||| || |||||||| || ||||||||||| |||||||| || ||| || ||
Sbjct 494 GCAAAGATAAGACGCTGTTGGTCTGGGGGAATACCTTCTTTGTCTTGAAT-TTTGGCTTT 552
Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
||| || || ||||| || | ||| || ||||| ||||| || ||||| ||
Sbjct 553 GACATTCTCAATAGTGTCCGATGGTTCAACTTCTAAAGTGATAGTTTTGCCAGT 606
>seq113071
Length=4807
Score = 93.3 bits (102), Expect = 1e-13
Identities = 113/153 (74%), Gaps = 2/153 (1%)
Strand=Plus/Minus
Query 7566 TATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGG 7625
|||| |||| || ||||| || |||||||||| || | ||||| || |||| || ||
Sbjct 3305 TATTGTTACAGCTCATGCATTCATTATGATTTT--TTATAGTTATACCAATTATAATTGG 3248
Query 7626 CGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAG 7685
|| || ||||||||||| || || |||| | || | |||||||||||||| || |
Sbjct 3247 TGGATTTGGAAATTGATTAGTACCCCTAATATTAGGAGTGCCTGATATGGCTTTCTCACG 3188
Query 7686 GCTTAACAATATAAGTTTTTGATTACTACCGCC 7718
| || |||| ||| |||||| || |||| ||
Sbjct 3187 AATAAATAATAAAAGATTTTGAATATTACCCCC 3155
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1188756248821722
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |