Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_030240.1
Length=128058
Score E
Sequences producing significant alignments: (Bits) Value
seq131719 235 4e-57
seq131720 109 4e-19
seq193007 89.7 4e-13
seq67196 86.0 5e-12
>seq131719
Length=2163
Score = 235 bits (260), Expect = 4e-57
Identities = 353/499 (71%), Gaps = 2/499 (0%)
Strand=Plus/Plus
Query 109141 GCGTACTTTGTCGAATGGGGTGTGTACGGCCGCAATTTTCCCGTGGACAAAGTGCCGTTG 109200
|| ||||| || |||||||| ||||| | || || ||||||||| |||||| |
Sbjct 1560 GCTTACTTCGTAGAATGGGGAGTGTATCCGAGGAAGTTCCCCGTGGACCGCGTGCCGATC 1619
Query 109201 CCCAATTTATCGCATTTGCTGTACGGTTTTATTCCAATATGTGGCGGCGACGGCATCAAC 109260
|||||| | | || ||| ||||||| || ||||| || || || |||||||||||||||
Sbjct 1620 CCCAATCTGACTCACTTGTTGTACGGGTTCATTCCGATCTGCGGAGGCGACGGCATCAAC 1679
Query 109261 GACGCCCTCAAAACCATTCCCGGCAGTTTTGACGCTTTGCAACGATCGTGCCGCGGTCGC 109320
||| || || ||| |||||||| | || | || || || ||| |||| |||
Sbjct 1680 GACAGTCTGAAGGAGATTGAGGGCAGTTTCCAGGCACTCCAGCGTTCCTGCAGCGGCCGC 1739
Query 109321 GACGATTTCAAAGTGTCCATACACGACATTTGGGCCGCGGTGCAAAAACCGCAAAAAGGC 109380
|| || |||||||||||||| || ||| |||||||| | || ||||| ||||| |||
Sbjct 1740 GAAGACTTCAAAGTGTCCATTCATGACCCCTGGGCCGCTCTTCAGAAACCACAAAAGGGC 1799
Query 109381 GTGACCGCGTGGAACGAGCCGTACAAAGGCAACTTTGGACAATTGATGGCGGCCAAATTG 109440
| | | |||||||| || |||||||| ||||| || ||| ||||| | ||| |
Sbjct 1800 CTTTCTTCATGGAACGAACCTTACAAAGGAAACTTCGGCCAACTGATGATGTTGAAACAG 1859
Query 109441 GCAAATCCTCACGTTAAAATTCTACCGTCCATAGGCGGGTGGACGTTGTCGGACCCGTTT 109500
|| | || || | || ||| | || ||| | ||||| ||||| ||| | || || ||
Sbjct 1860 GCGAGACCAGACCTCAAGATTTTGCCTTCCGTCGGCGGCTGGACTTTGGCTGATCCATTC 1919
Query 109501 TATTTTATGCAC-GATTCGGCGAAAAGAGCCACATTCGTTGAATCGGTGCGCGAATTTTT 109559
| |||| | ||| || | | || | | | ||||||| || || || || |
Sbjct 1920 T-TTTTCTTCACTGACAAGACAAAGCGTGACCGTTTCGTTGCTTCCGTAAAAGACTTCCT 1978
Query 109560 ACAAGTGTGGAAATTCTTTGACGGCGTCGACATTGATTGGGAGTTTCCGGGCGGCAAGGG 109619
|| ||||||||||||||||||||||| || ||||||||||| || || || || ||
Sbjct 1979 CCAGACCTGGAAATTCTTTGACGGCGTCGATATCGATTGGGAGTTCCCTGGAGGTAAAGG 2038
Query 109620 TGCCAATCCGAGTCTCGGC 109638
|| || || | |||||||
Sbjct 2039 CGCTAACCCCAATCTCGGC 2057
>seq131720
Length=1042
Score = 109 bits (120), Expect = 4e-19
Identities = 252/373 (68%), Gaps = 10/373 (3%)
Strand=Plus/Plus
Query 109729 TACGAATTGACGAGCGCCATTAGCGCCGGTTACGATAAAATTGACGTGGTCGATTAC-GC 109787
||||| |||||| ||||| || || |||| || || || | || ||||||||| ||
Sbjct 80 TACGAGTTGACGTCTGCCATCAGTGCTGGTTGGGACAAGATCCAAGTCGTCGATTACAGC 139
Query 109788 GTCGGCGCAACAATATTTGGACAAAATATTTTTAATGACATACGATTTCAAAGGCGCTTG 109847
| | ||||| |||| ||||| | ||||| || |||| ||||||||||| || || ||
Sbjct 140 G-CAGCGCAGAAATACATGGACCACATATTCTTCATGAGCTACGATTTCAAGGGAGCGTG 198
Query 109848 GTCAAACACGGACT-TAGGCTATCACACGACTGTGTACGCGCCCACGTGGAATCCAAACG 109906
||| || ||| | || | || | || ||||||| || | ||| | || || |
Sbjct 199 GTCCAA-TGATACTCTTGGTCACCAGGCTTCTCTGTACGCTCCATCTTGGCAGCCGAAGG 257
Query 109907 AATTGTACACGACCGATGTGGCGGTCAAAGAGCTGTTCAAACAAAAAGTGTCGCCTaaaa 109966
| |||||||| ||| | | || ||| | |||| ||| ||| ||||| |
Sbjct 258 AGACTTACACGACTGATTTCGGCGTGAAATACTTGTTGGCGCAAGGTGTGAATCCTAAGA 317
Query 109967 aaaTTATAATTGGCGTAGCGATGTACGGCCGCGGCTGGACGGGCGTCGTGCACG---CCG 110023
| ||| | |||| || || |||||||| || |||||||| || ||| |||| |
Sbjct 318 AGATTGTGGTTGGTGTTGCCATGTACGGACGTGGCTGGACCGGTGTC---CACGGTTATG 374
Query 110024 ACGACGCGAATCCGTTTTTGGGCATCGCCTCCGGTCCCGTGGAAGGCACTTGGGAAAACG 110083
| | | ||||| || |||| || | ||||| || |||| |||||| || | |
Sbjct 375 AAGGTGACAATCCTTTCACTGGCAATGCAACGGGTCCTGTTAAAGGTACTTGGCAAGATG 434
Query 110084 GCGTGGTGGACTA 110096
| |||||||||||
Sbjct 435 GTGTGGTGGACTA 447
>seq193007
Length=659
Score = 89.7 bits (98), Expect = 4e-13
Identities = 150/213 (70%), Gaps = 8/213 (4%)
Strand=Plus/Plus
Query 101030 ACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGA--ATCTT 101087
|||| |||||| || |||||||| || |||||||| |||| ||||| | | |||||
Sbjct 422 ACCAAGTGCAATGTAGATTCTTTCTGGATATTGTAGTCGG--ATAGTGTGCGTCCATCTT 479
Query 101088 CCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGG 101147
| | |||||| || ||| | ||||| | ||||||||| ||| | |||||||||||
Sbjct 480 CAAGTTGTTTTCCAGCAAAGATAAGACGCTGTTGGTCTGGGGGAATACCTTCTTTGTCTT 539
Query 101148 CAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT--GTTTCGACGGTAATAGT 101205
|||||| ||| |||| | | || || | | ||| ||| | || |||||
Sbjct 540 GAATTTTGGCTTTGACATTCTCAATAGTGTCCGATG--GTTCAACTTCTAAAGTGATAGT 597
Query 101206 TTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238
|||||| || | ||| || | ||| || |||||
Sbjct 598 TTTGCCAGTAAGTGTCTTGACAAAGATCTGCAT 630
>seq67196
Length=1848
Score = 86.0 bits (94), Expect = 5e-12
Identities = 145/208 (70%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 101036 TGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGT 101095
|| ||||| ||||||||||||||||||||||| | || ||| | |||||||| ||
Sbjct 720 TGTAAAGTGGATTCTTTTTGAATATTGTAATCTGACAAAGTACGGCCGTCTTCCAACTGC 779
Query 101096 TTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTT 101155
|| || ||| | || || | || || ||| ||| | ||||||||||| ||| ||
Sbjct 780 TTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGGATACCTTCTTTGTCCTGAATCTTA 839
Query 101156 TGTTTCACATCGGCCACCGTCTCTGTGGACGTT--GTTTCGACGGTAATAGTTTTGCCCG 101213
||| || | | | || || || | ||| ||| | ||| || ||||| || |
Sbjct 840 GCTTTAACGTTCTCGATAGTATC--TGAAGGTTCGACTTCCAAGGTGATCGTTTTTCCAG 897
Query 101214 TCAATGTTTTAATAAAAATTTGCATTAT 101241
|||| ||||| | ||||| ||||||||
Sbjct 898 TCAAAGTTTTCACGAAAATCTGCATTAT 925
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408427278430317
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |