Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq131719 235 4e-57 seq131720 109 4e-19 seq193007 89.7 4e-13 seq67196 86.0 5e-12 >seq131719 Length=2163 Score = 235 bits (260), Expect = 4e-57 Identities = 353/499 (71%), Gaps = 2/499 (0%) Strand=Plus/Plus Query 109141 GCGTACTTTGTCGAATGGGGTGTGTACGGCCGCAATTTTCCCGTGGACAAAGTGCCGTTG 109200 || ||||| || |||||||| ||||| | || || ||||||||| |||||| | Sbjct 1560 GCTTACTTCGTAGAATGGGGAGTGTATCCGAGGAAGTTCCCCGTGGACCGCGTGCCGATC 1619 Query 109201 CCCAATTTATCGCATTTGCTGTACGGTTTTATTCCAATATGTGGCGGCGACGGCATCAAC 109260 |||||| | | || ||| ||||||| || ||||| || || || ||||||||||||||| Sbjct 1620 CCCAATCTGACTCACTTGTTGTACGGGTTCATTCCGATCTGCGGAGGCGACGGCATCAAC 1679 Query 109261 GACGCCCTCAAAACCATTCCCGGCAGTTTTGACGCTTTGCAACGATCGTGCCGCGGTCGC 109320 ||| || || ||| |||||||| | || | || || || ||| |||| ||| Sbjct 1680 GACAGTCTGAAGGAGATTGAGGGCAGTTTCCAGGCACTCCAGCGTTCCTGCAGCGGCCGC 1739 Query 109321 GACGATTTCAAAGTGTCCATACACGACATTTGGGCCGCGGTGCAAAAACCGCAAAAAGGC 109380 || || |||||||||||||| || ||| |||||||| | || ||||| ||||| ||| Sbjct 1740 GAAGACTTCAAAGTGTCCATTCATGACCCCTGGGCCGCTCTTCAGAAACCACAAAAGGGC 1799 Query 109381 GTGACCGCGTGGAACGAGCCGTACAAAGGCAACTTTGGACAATTGATGGCGGCCAAATTG 109440 | | | |||||||| || |||||||| ||||| || ||| ||||| | ||| | Sbjct 1800 CTTTCTTCATGGAACGAACCTTACAAAGGAAACTTCGGCCAACTGATGATGTTGAAACAG 1859 Query 109441 GCAAATCCTCACGTTAAAATTCTACCGTCCATAGGCGGGTGGACGTTGTCGGACCCGTTT 109500 || | || || | || ||| | || ||| | ||||| ||||| ||| | || || || Sbjct 1860 GCGAGACCAGACCTCAAGATTTTGCCTTCCGTCGGCGGCTGGACTTTGGCTGATCCATTC 1919 Query 109501 TATTTTATGCAC-GATTCGGCGAAAAGAGCCACATTCGTTGAATCGGTGCGCGAATTTTT 109559 | |||| | ||| || | | || | | | ||||||| || || || || | Sbjct 1920 T-TTTTCTTCACTGACAAGACAAAGCGTGACCGTTTCGTTGCTTCCGTAAAAGACTTCCT 1978 Query 109560 ACAAGTGTGGAAATTCTTTGACGGCGTCGACATTGATTGGGAGTTTCCGGGCGGCAAGGG 109619 || ||||||||||||||||||||||| || ||||||||||| || || || || || Sbjct 1979 CCAGACCTGGAAATTCTTTGACGGCGTCGATATCGATTGGGAGTTCCCTGGAGGTAAAGG 2038 Query 109620 TGCCAATCCGAGTCTCGGC 109638 || || || | ||||||| Sbjct 2039 CGCTAACCCCAATCTCGGC 2057 >seq131720 Length=1042 Score = 109 bits (120), Expect = 4e-19 Identities = 252/373 (68%), Gaps = 10/373 (3%) Strand=Plus/Plus Query 109729 TACGAATTGACGAGCGCCATTAGCGCCGGTTACGATAAAATTGACGTGGTCGATTAC-GC 109787 ||||| |||||| ||||| || || |||| || || || | || ||||||||| || Sbjct 80 TACGAGTTGACGTCTGCCATCAGTGCTGGTTGGGACAAGATCCAAGTCGTCGATTACAGC 139 Query 109788 GTCGGCGCAACAATATTTGGACAAAATATTTTTAATGACATACGATTTCAAAGGCGCTTG 109847 | | ||||| |||| ||||| | ||||| || |||| ||||||||||| || || || Sbjct 140 G-CAGCGCAGAAATACATGGACCACATATTCTTCATGAGCTACGATTTCAAGGGAGCGTG 198 Query 109848 GTCAAACACGGACT-TAGGCTATCACACGACTGTGTACGCGCCCACGTGGAATCCAAACG 109906 ||| || ||| | || | || | || ||||||| || | ||| | || || | Sbjct 199 GTCCAA-TGATACTCTTGGTCACCAGGCTTCTCTGTACGCTCCATCTTGGCAGCCGAAGG 257 Query 109907 AATTGTACACGACCGATGTGGCGGTCAAAGAGCTGTTCAAACAAAAAGTGTCGCCTaaaa 109966 | |||||||| ||| | | || ||| | |||| ||| ||| ||||| | Sbjct 258 AGACTTACACGACTGATTTCGGCGTGAAATACTTGTTGGCGCAAGGTGTGAATCCTAAGA 317 Query 109967 aaaTTATAATTGGCGTAGCGATGTACGGCCGCGGCTGGACGGGCGTCGTGCACG---CCG 110023 | ||| | |||| || || |||||||| || |||||||| || ||| |||| | Sbjct 318 AGATTGTGGTTGGTGTTGCCATGTACGGACGTGGCTGGACCGGTGTC---CACGGTTATG 374 Query 110024 ACGACGCGAATCCGTTTTTGGGCATCGCCTCCGGTCCCGTGGAAGGCACTTGGGAAAACG 110083 | | | ||||| || |||| || | ||||| || |||| |||||| || | | Sbjct 375 AAGGTGACAATCCTTTCACTGGCAATGCAACGGGTCCTGTTAAAGGTACTTGGCAAGATG 434 Query 110084 GCGTGGTGGACTA 110096 | ||||||||||| Sbjct 435 GTGTGGTGGACTA 447 >seq193007 Length=659 Score = 89.7 bits (98), Expect = 4e-13 Identities = 150/213 (70%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 101030 ACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGA--ATCTT 101087 |||| |||||| || |||||||| || |||||||| |||| ||||| | | ||||| Sbjct 422 ACCAAGTGCAATGTAGATTCTTTCTGGATATTGTAGTCGG--ATAGTGTGCGTCCATCTT 479 Query 101088 CCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGG 101147 | | |||||| || ||| | ||||| | ||||||||| ||| | ||||||||||| Sbjct 480 CAAGTTGTTTTCCAGCAAAGATAAGACGCTGTTGGTCTGGGGGAATACCTTCTTTGTCTT 539 Query 101148 CAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT--GTTTCGACGGTAATAGT 101205 |||||| ||| |||| | | || || | | ||| ||| | || ||||| Sbjct 540 GAATTTTGGCTTTGACATTCTCAATAGTGTCCGATG--GTTCAACTTCTAAAGTGATAGT 597 Query 101206 TTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 |||||| || | ||| || | ||| || ||||| Sbjct 598 TTTGCCAGTAAGTGTCTTGACAAAGATCTGCAT 630 >seq67196 Length=1848 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 101036 TGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGT 101095 || ||||| ||||||||||||||||||||||| | || ||| | |||||||| || Sbjct 720 TGTAAAGTGGATTCTTTTTGAATATTGTAATCTGACAAAGTACGGCCGTCTTCCAACTGC 779 Query 101096 TTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTT 101155 || || ||| | || || | || || ||| ||| | ||||||||||| ||| || Sbjct 780 TTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGGATACCTTCTTTGTCCTGAATCTTA 839 Query 101156 TGTTTCACATCGGCCACCGTCTCTGTGGACGTT--GTTTCGACGGTAATAGTTTTGCCCG 101213 ||| || | | | || || || | ||| ||| | ||| || ||||| || | Sbjct 840 GCTTTAACGTTCTCGATAGTATC--TGAAGGTTCGACTTCCAAGGTGATCGTTTTTCCAG 897 Query 101214 TCAATGTTTTAATAAAAATTTGCATTAT 101241 |||| ||||| | ||||| |||||||| Sbjct 898 TCAAAGTTTTCACGAAAATCTGCATTAT 925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408427278430317