Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq168888 610 9e-170 seq58710 84.2 3e-11 >seq168888 Length=4095 Score = 610 bits (676), Expect = 9e-170 Identities = 1209/1780 (68%), Gaps = 26/1780 (1%) Strand=Plus/Minus Query 76773 TTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCA 76832 ||||| | ||||||||| || | | || || || ||||| | | ||| ||||| || Sbjct 3213 TTATCAACTGTAAACTGTATAGCATTAGCAGCTGGCTTTGTTCTCAAATAATACATGCCG 3154 Query 76833 GTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGA 76892 ||||| ||||||| |||| | || || || || ||| | ||| ||| | || Sbjct 3153 GTTTTAAGACCCATTTTCCAAGCATAAAAGTGAATCGATGTTAATTTACCGTAATTTGGT 3094 Query 76893 TCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCC 76952 || |||| |||||| || | ||||||||||| || || || || || ||||| || ||| Sbjct 3093 TCAGCTACATGAATGTTAAAAGACTGACTTTGGTCAATAAATGCACCCCTATCGGCAGCC 3034 Query 76953 ATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCA 77012 |||| || | || || || | ||||||| ||| || | | | | | || || Sbjct 3033 ATTTGAATTGTAGTTTTAACAGACACCTCCCAAACAGTCTTATATAGATCTCTTATTTCT 2974 Query 77013 TCTGGAA--GGTT-TGTATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATA 77069 | |||| | || | ||||||| || || ||| || ||| || ||| || || Sbjct 2973 TTCGGAATAGCTTCTATATTTTGTATTGACCCATTATTGTGTATTATAAGATTTTTCATG 2914 Query 77070 TCATCATTCCACAATT-TCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTG 77128 || |||| |||||| | | || || |||||| | | | | |||| |||| || | ||| Sbjct 2913 TCTTCATCCCACAAATCTGCT-TCAGTTAAATCACGCAATAAATGATGATTTACAACTTG 2855 Query 77129 AAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTC 77188 || || |||||||| ||||| | ||| ||||| || | ||||| | ||||| Sbjct 2854 GAACTCGCCAGACAAAACTCTTCTTTGGTATATATTTGATGTGAAAGGTTCAAATGATTC 2795 Query 77189 ATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATT 77248 |||||| || | ||||||||| || || || ||||||||||| || | |||||| ||| Sbjct 2794 ATTGTTACCAAGAATTTGAGCCGTGGATGCTGTTGGCATAGGAGCTAATAATAAAGAATT 2735 Query 77249 TCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATC--TGAA 77306 ||| | |||||| | ||| | ||||||| | | ||| | |||||| || || Sbjct 2734 TCTCAAACCATGCTTAGAAATTCTTTCTTTTAAAGCATCCCAGTTCCAAAGGTCGGTGGG 2675 Query 77307 GGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTA-TA 77365 ||| | ||| | |||||||||| || || | ||| | || | | | || || Sbjct 2674 GGTTTTGCT--CCACATGTCGTATTGTAATATACCTTGACTGG-ATGGGCTTCCTTCGTA 2618 Query 77366 TGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATA 77425 || |||||| || | |||| || ||||||||||| ||||| | ||| |||||||| Sbjct 2617 AGTGTCATAAACCCCATACTTTTCTGCAAGTTCACAACTAGCTTCTAGTGCCCCGTAATA 2558 Query 77426 AATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATG 77485 ||| ||||| || || | | ||| || | ||| || ||| ||| | | | | Sbjct 2557 AATGGTTTCAAATATTTGTTGATTAAGTTTCATCGCTGCATCACTTTCATATGCAATGCG 2498 Query 77486 TAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTT 77545 | | | ||| | |||||||| || ||||| ||||| || ||||| ||||| ||| | Sbjct 2497 CATCAAGACAAATGTATCTGCTAGCCCTTGAACACCAATTCCTATAGGCCTATGCCTCAT 2438 Query 77546 ATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATT 77605 ||| || || | || || || || ||||| |||||| || || |||||||| | || Sbjct 2437 ATTTGATTTTCTTGCCTCCGGGATCGGATAGAAATTAACATCAATGATTTTATTTAAGTT 2378 Query 77606 TCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATCTA---T 77662 | | || | ||| || || |||| |||| ||||| | || || |||| | Sbjct 2377 TTGAGTAATAATTTTGGTGACTTCTTTTAATTTATTAAAATTATATGTTTTATCTTCATT 2318 Query 77663 AACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGC 77722 |||||||||||||||||| |||||||||| |||||| || || || || | ||| | Sbjct 2317 AACAAACATGTTCAAAGCAATAGATGCTAAATTACACACCGCGACTTCGTCAGCTGACGT 2258 Query 77723 ATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTT 77782 |||| | ||||| || |||| ||||||||||| |||||||| | || | |||||| Sbjct 2257 GTATTCAACGATCTCAGTGCATAAGTTACTACATTTTATAGTGCCTAAGTTCTTTTGGTT 2198 Query 77783 GCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGA 77842 || || | || || | ||| || ||||| ||| | || || || ||||||| || | Sbjct 2197 ACTTTTCCTGTTACAAGCGTCTTTGTAAAGCATATAGGGTGTTCCCGTTTCAACTTGGGC 2138 Query 77843 TTCGATAATAGATTTCCAGACGACT------CTAGCTTTTATCATAGATTTGTATCGCCT 77896 |||||| || | |||||| | ||| || | | | ||| | | ||| | Sbjct 2137 TTCGATTATGGCTTTCCATAAAACTTGGGCGCTGACCTGTTTCACA------AAACGCTT 2084 Query 77897 CTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCC 77956 ||| |||| ||||| |||||| ||| ||||||||||||||| ||| | ||||| Sbjct 2083 TTCTTTTTCGTATTGTTCATATAGATTTTCGAATTCATCTCCCCAACAGTCAGCTAATCC 2024 Query 77957 AGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAA 78016 ||| || |||| || ||||| | |||||| ||| || | ||||| ||||||||| Sbjct 2023 AGGACAATCATGAGGACACATAAGACTCCAGTCTTCATTTTTTTCAACTCTTTTCATAAA 1964 Query 78017 GAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGT 78076 ||||| |||||||||| |||| ||| | ||||| | || |||||| || || || Sbjct 1963 AAGATCCGGTATCCATAAAGCATAAAACAACTCTCGAGCTCGTACTTCTTCTTTGCCAGT 1904 Query 78077 ATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGC 78136 |||||||| || |||||||| || | ||| || | |||||| || |||| ||| | ||| Sbjct 1903 GTTCTTTTTGAGGTCGAGAAATTCAAAAATGTCTGCATGCCAAGGCTCTAAATACACTGC 1844 Query 78137 CATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAAC 78196 | | |||| || |||||||| || || ||||||| |||||| || ||||| || ||||| Sbjct 1843 AAAAGCTCCGGGGCGTTTATTTCCACCTTGATCTACATATCTTGCTGTGTTGTTGTAAAC 1784 Query 78197 TCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACT 78256 || | |||||| | | ||||||||| |||||||| || | ||||| ||| | Sbjct 1783 CCTAAGCATTGGCACGAGTCCGTTAGATACACCATTTGTGCCTGCGATATATGATCCTTT 1724 Query 78257 TGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCA 78316 || | ||| || | | || ||||| || || |||||||| || || || Sbjct 1723 AGCTCTGATACAGTGAACGTGGACTCCGATTCCACCAGCAGATTTAGATATAAGCGCACA 1664 Query 78317 ACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACA 78376 |||| || ||||| || ||||| || ||||||||||| |||| | ||||||||| Sbjct 1663 TTGTTTTAAAGTATCATATATACCTTCAATACTGTCATCTTTCATAGCTACAAGAAAACA 1604 Query 78377 GCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAA 78436 |||| ||| | | || | || || | || || || || ||||| Sbjct 1603 AGATGACAATTGTGGCCGTGGTGTGGCAGCTGAGAACAGGGTTGGGCTGGCGTGTGTAAA 1544 Query 78437 CCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAAT 78496 |||||||||| || | |||||| || | || || | ||||| || ||| || Sbjct 1543 ATATTTTTCAGACAGCAAATTGTAAGTATTTATGGCAGCATCTATATCTTCACCATGGAT 1484 Query 78497 TCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCA 78536 || | | ||| | ||||| ||||||||| |||| |||| Sbjct 1483 ACCAATAGATACTCTCATCAGCATATGCTGTGGTCGTTCA 1444 >seq58710 Length=10965 Score = 84.2 bits (92), Expect = 3e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 170984 CCTATGTTAGCAGAATCATGTGATTCTGTTAACAAGGCATTTAAAAAATTTCCATCTGGA 171043 || ||| |||| || ||||| | |||||| | | |||| | || |||| |||| |||| Sbjct 3213 CCAATGCTAGCGGAGGCATGTAAGTCTGTTGAAATGGCAATGAAGAAATGTCCAAATGGA 3272 Query 171044 ATGTTTGCAGAAGTAAAATATGATGGTGAACGAGTCCAAGTTCATAAAA 171092 ||||| ||||| | |||||||||||||| ||||| || || || |||| Sbjct 3273 ATGTTCTCAGAAATCAAATATGATGGTGAGCGAGTGCAGGTGCACAAAA 3321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 692523463028320