Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq168888 578 6e-160 seq105002 95.1 2e-14 >seq168888 Length=4095 Score = 578 bits (640), Expect = 6e-160 Identities = 1184/1748 (68%), Gaps = 24/1748 (1%) Strand=Plus/Minus Query 75398 GCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 75457 ||||| ||||| | | ||| ||||| || ||||| ||||||| |||| | || || Sbjct 3183 GCTGGCTTTGTTCTCAAATAATACATGCCGGTTTTAAGACCCATTTTCCAAGCATAAAAG 3124 Query 75458 TGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTT 75517 || || ||||| ||| ||| | || || |||| |||||| || | ||||||||| Sbjct 3123 TGAATCGATGTTAATTTACCGTAATTTGGTTCAGCTACATGAATGTTAAAAGACTGACTT 3064 Query 75518 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCC 75577 || || || || || || ||||| || ||||||| || | || || || | ||| Sbjct 3063 TGGTCAATAAATGCACCCCTATCGGCAGCCATTTGAATTGTAGTTTTAACAGACACCTCC 3004 Query 75578 CAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGA---TTTGTATTTTGAATGGAT 75634 |||| ||| || | | | | | || || | |||| | | | ||||||| || || Sbjct 3003 CAAACAGTCTTATATAGATCTCTTATTTCTTTCGGAATAGCTTCTATATTTTGTATTGAC 2944 Query 75635 CCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAA 75694 || || ||| || ||| || || || |||| |||||| | | || |||||| Sbjct 2943 CCATTATTGTGTATTATAAGATTTTTCATGTCTTCATCCCACAAATCTGCTTCAGTTAAA 2884 Query 75695 ACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAA 75754 | | | | |||| |||| |||| ||| || || |||||||| ||||||| ||| Sbjct 2883 TCACGCAATAAATGATGATTTACAACTTGGAACTCGCCAGACAAAACTCTTCTTTGGTAT 2824 Query 75755 ATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCA 75814 ||||| || | ||||| | ||||||||||| || | ||||||||| || || || Sbjct 2823 ATATTTGATGTGAAAGGTTCAAATGATTCATTGTTACCAAGAATTTGAGCCGTGGATGCT 2764 Query 75815 GTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTT 75874 || |||||||| || | |||||| |||||| | |||||| | ||| | |||||| Sbjct 2763 GTTGGCATAGGAGCTAATAATAAAGAATTTCTCAAACCATGCTTAGAAATTCTTTCTTTT 2704 Query 75875 AGATATTTCCAATCCCAAAGATC--TGATGGTACAACATCCCAGAGATCGTATTGTAGAA 75932 | | | ||| | |||||| || || ||| | ||| | |||||||||| | Sbjct 2703 AAAGCATCCCAGTTCCAAAGGTCGGTGGGGGTTTTGC--TCCACATGTCGTATTGTAATA 2646 Query 75933 TTCCGTTGCTAGCATATG-ATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGT 75991 | || ||| | || | ||| | || || || ||| ||| | |||||| || ||| Sbjct 2645 TACC-TTGACTGGATGGGCTTCCTTCGTAAGTGTCATAAACCCCATACTTTTCTGCAAGT 2587 Query 75992 TCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCT 76051 || ||||| || |||| || ||||||||||| ||||| || || | | |||||| | Sbjct 2586 TCACAACTAGCTTCTAGTGCCCCGTAATAAATGGTTTCAAATATTTGTTGATTAAGTTTC 2527 Query 76052 TGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGA 76111 |||| || ||| ||| | | | | | | | ||||| ||||||||| || ||| Sbjct 2526 ATCGCTGCATCACTTTCATATGCAATGCGCATCAAGACAAATGTATCTGCTAGCCCTTGA 2467 Query 76112 ACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAA 76171 || ||||| || ||||| ||||| ||| |||| || || || || || || || || Sbjct 2466 ACACCAATTCCTATAGGCCTATGCCTCATATTTGATTTTCTTGCCTCCGGGATCGGATAG 2407 Query 76172 TAATTAATATCTATAATTTTATTGAGATTTCTGA-CAACTACTTTAACCACGTCCTTTAG 76230 |||||| ||| || |||||||| | | || ||| || | ||| || || |||| Sbjct 2406 AAATTAACATCAATGATTTTATTTA-AGTTTTGAGTAATAATTTTGGTGACTTCTTTTAA 2348 Query 76231 TTTGAGAAAATCAAATTTTCCATCT---ATCACAAACATATTAAGAGCTATAGATGCTAG 76287 ||| ||||| | || || |||| | |||||||| || | ||| |||||||||| Sbjct 2347 TTTATTAAAATTATATGTTTTATCTTCATTAACAAACATGTTCAAAGCAATAGATGCTAA 2288 Query 76288 ATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACT 76347 |||||| || || || || | ||| | |||| | ||||| ||||||| ||||| Sbjct 2287 ATTACACACCGCGACTTCGTCAGCTGACGTGTATTCAACGATCTCAGTGCATAAGTTACT 2228 Query 76348 ACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAG 76407 ||| || ||||| || | || | |||||| || || ||||||| | ||| || ||||| Sbjct 2227 ACATTTTATAGTGCCTAAGTTCTTTTGGTTACTTTTCCTGTTACAAGCGTCTTTGTAAAG 2168 Query 76408 AACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGC 76467 | | | || ||||| ||||||| || | |||||| || | |||||| | ||| || Sbjct 2167 CATATAGGGTGTTCCCGTTTCAACTTGGGCTTCGATTATGGCTTTCCATAAAACTTGGGC 2108 Query 76468 TTT----TATTATAGATTTGTATCGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAA 76523 | | || | | | ||||| ||| |||| |||||| ||||| ||| | Sbjct 2107 GCTGACCTGTTTCACA----AAACGCTTTTCTTTTTCGTATTGTTCATATAGATTTTCGA 2052 Query 76524 ATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACT 76583 |||||||||||||| ||| | || |||||||| |||| |||||||| | ||| | Sbjct 2051 ATTCATCTCCCCAACAGTCAGCTAATCCAGGACAATCATGAGGACACATAAGACTCCAGT 1992 Query 76584 CACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGAT 76643 | ||| || | ||| | ||||||||| ||||| |||||||||| |||| ||| | | Sbjct 1991 CTTCATTTTTTTCAACTCTTTTCATAAAAAGATCCGGTATCCATAAAGCATAAAACAACT 1932 Query 76644 CTCGGGTTC-TACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATA 76702 |||| | || ||| |||||| || || || |||||||| || || || || || | ||| Sbjct 1931 CTCGAGCTCGTAC-TTCTTCTTTGCCAGTGTTCTTTTTGAGGTCGAGAAATTCAAAAATG 1873 Query 76703 TCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGA 76762 || | |||||| || |||| ||| | || | | | || || |||||||| || || ||| Sbjct 1872 TCTGCATGCCAAGGCTCTAAATACACTGCAAAAGCTCCGGGGCGTTTATTTCCACCTTGA 1813 Query 76763 TCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTA 76822 |||| |||||| || ||||| || ||||| || | |||||| | | ||||||||| | Sbjct 1812 TCTACATATCTTGCTGTGTTGTTGTAAACCCTAAGCATTGGCACGAGTCCGTTAGATACA 1753 Query 76823 CCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATT 76882 |||||||| || | ||||| ||| || | ||| || | || ||| Sbjct 1752 CCATTTGTGCCTGCGATATATGATCCTTTAGCTCTGATACAGTGAACGTGGACTCCGATT 1693 Query 76883 CCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATA 76942 || || || |||||| || || ||||| |||| || || ||||| || || || ||| Sbjct 1692 CCACCAGCAGATTTAGATATAAGCGCACATTGTTTTAAAGTATCATATATACCTTCAATA 1633 Query 76943 CTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCA 77002 || ||||| |||| | ||||||||| |||| ||| | | || | || Sbjct 1632 CTGTCATCTTTCATAGCTACAAGAAAACAAGATGACAATTGTGGCCGTGGTGTGGCAGCT 1573 Query 77003 TTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCA 77062 |||| || || || || || || |||||||||| || | |||||| || | Sbjct 1572 GAGAACAGGGTTGGGCTGGCGTGTGTAAAATATTTTTCAGACAGCAAATTGTAAGTATTT 1513 Query 77063 ATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGA 77122 || | || |||||||| ||| || || | || || | ||||| ||||||||| Sbjct 1512 ATGGCAGCATCTATATCTTCACCATGGATACCAATAGATACTCTCATCAGCATATGCTGT 1453 Query 77123 GGTCGTTC 77130 |||||||| Sbjct 1452 GGTCGTTC 1445 >seq105002 Length=4868 Score = 95.1 bits (104), Expect = 2e-14 Identities = 117/159 (74%), Gaps = 1/159 (1%) Strand=Plus/Minus Query 77341 AAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGC 77400 |||| |||| | ||||| |||||||| || |||| |||| || |||||||| | || Sbjct 3815 AAAT-GTTTCTGAGTTTCTTTGTGTAGGTTGGATATAGCTAGTCGAGCAGCTAACACAGC 3757 Query 77401 ATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAATTC 77460 |||||||||||| | ||||| || || || ||||||| |||||| |||||||||| Sbjct 3756 ATAGTCAGGATGATTAGTAGTCATAGTTGCCGCGGTTTCTGCTGCTAAATTATCTAATTC 3697 Query 77461 TATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTT 77499 | ||| || || || || | ||| | |||||||| Sbjct 3696 AACAGTTGTTACACCAGAGTAAATCCCATTTATAACTTT 3658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 710732653604160