Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq67196 140 7e-28 seq193007 125 2e-23 >seq67196 Length=1848 Score = 140 bits (154), Expect = 7e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || |||||||| | |||||| ||||| || || ||||| || | || || | ||||||| Sbjct 27 AGTACAAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGATAGGGTGCGCCCATCT 86 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || ||||| || || ||||||||||| | | ||| || ||||| ||| Sbjct 87 TCAAGTTGTTTGCCAGCGAAAATCAGTCTCTGCTGGTCTGGGGGGATCCCCTCCTTATCT 146 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || ||| ||| |||| | ||||||| |||||| || |||||||||||| Sbjct 147 TGAATCTTGGCTTTTACATTCTCAATAGTGTCTGATGGCTCTACCTCTAGAGTAATAGTT 206 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || | || || || |||| |||||| Sbjct 207 TTACCAGTCAAGGTTTTAACAAAGATCTGCAT 238 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || ||||| | |||||| ||||| || || ||||| || | || || | ||||||| Sbjct 483 AGTACTAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGATAGGGTACGCCCATCT 542 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || || || || | ||||||||||| | | ||| |||||||| ||| Sbjct 543 TCAAGTTGTTTGCCAGCAAAAATCATTCTCTGCTGGTCTGGGGGGATCCCTTCCTTATCT 602 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 |||||||| || || | || | |||| || ||| |||||||| ||||||||| Sbjct 603 TGAATTTTAGCCTTAACGTTTTCAATTGTGTCCGATGGCTCAACTTCAAGTGTAATAGTT 662 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || || || || |||| |||||| Sbjct 663 TTGCCAGTAAGGGTTTTAACAAAGATCTGCAT 694 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 || |||||||| || || ||||||||||| || || || | || || | |||||||| Sbjct 258 ACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCAGATAGGGTGCGGCCATCTTCA 317 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || ||| || || ||||| || | || || || | || || |||||||| || ||| Sbjct 318 AGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGCGGAATACCTTCCTTATCCTGA 377 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || ||||||| | || | | |||| || ||| ||||| ||||| |||||||| Sbjct 378 ATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCAACTTCTAGAGTGATAGTTTTA 437 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || | || || || |||| |||||| Sbjct 438 CCAGTCAAGGTTTTAACAAAGATCTGCAT 466 >seq193007 Length=659 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 ||||| ||||| ||||| ||||| |||| || || | |||||||| || ||| || Sbjct 434 GTAGATTCTTTCTGGATATTGTAGTCGGATAGTGTGCGTCCATCTTCAAGTTGTTTTCCA 493 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 || |||||||| | ||| ||||| | | || ||||| || ||||||||||| |||| Sbjct 494 GCAAAGATAAGACGCTGTTGGTCTGGGGGAATACCTTCTTTGTCTTGAATTTTGGCTTTG 553 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 ||| |||| | |||| || || ||||| | ||| ||||||||||| || || ||| Sbjct 554 ACATTCTCAATAGTGTCCGATGGTTCAACTTCTAAAGTGATAGTTTTGCCAGTAAGTGTC 613 Query 152088 TTCACGAAGACCTGCAT 152104 || || |||| |||||| Sbjct 614 TTGACAAAGATCTGCAT 630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1150168386387273