Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq131719 140 2e-28 seq131720 129 4e-25 seq15021 118 8e-22 seq67196 104 2e-17 >seq131719 Length=2163 Score = 140 bits (154), Expect = 2e-28 Identities = 332/499 (67%), Gaps = 12/499 (2%) Strand=Plus/Minus Query 6424 GGATTGGCTCCCTTGCCTCCGGGAAATTCCCAATCTATGTCCACGCCGTCGAAGAACTTC 6483 || || || || || ||||| || || |||||||| || || |||||||| ||||| ||| Sbjct 2047 GGGTTAGCGCCTTTACCTCCAGGGAACTCCCAATCGATATCGACGCCGTCAAAGAATTTC 1988 Query 6484 CAAGTTTCCAGAAATTCTTCGACGCTCTCTACGAACACCTTTCTTTTAATCGTGTCGTTG 6543 || || | || || |||| ||| | ||||| | | || || |||| || Sbjct 1987 CAGGTCTGGAGGAAGTCTTTTACGGAAGCAACGAAACGGTCACGCTTTGTCTTGTCAGTG 1928 Query 6544 AGCTGGTAAAAG---GGATCGCTCAGCGTCCACCCACCGATCGAGGGCAGGATGGTCAGA 6600 | | ||||| ||||| || ||||| || |||| || |||| || | || Sbjct 1927 AA---GAAAAAGAATGGATCAGCCAAAGTCCAGCCGCCGACGGAAGGCAAAATCTTGAGG 1871 Query 6601 TGCGGATTG---TGTTTTCGTATGGCCATAAGCTGACCGAAATTACCCTTGTACATTTCC 6657 | || | ||||| || ||| || || ||||| || || ||||| ||| Sbjct 1870 TCTGGTCTCGCCTGTTTCAACAT---CATCAGTTGGCCGAAGTTTCCTTTGTAAGGTTCG 1814 Query 6658 GAGTAGGCCTCGACGCCCTTCTGGGGTTTTTGTAGTGCGCCCCATATATCGTGTATGGAC 6717 | | | |||||| || ||||| || || ||| |||| || || |||||| Sbjct 1813 TTCCATGAAGAAAGGCCCTTTTGTGGTTTCTGAAGAGCGGCCCAGGGGTCATGAATGGAC 1754 Query 6718 ACCTTGAAGTCGTCTCGTCCCTCGCACGATCGCTGCAGAGCTTCGAACGAGCCCGGCACC 6777 || |||||||| || || || ||| || ||||| || || | ||| |||| | | Sbjct 1753 ACTTTGAAGTCTTCGCGGCCGCTGCAGGAACGCTGGAGTGCCTGGAAACTGCCCTCAATC 1694 Query 6778 TGTTTCAGAGCGTCGTTGATACCATCCCCTCCGCACATGGGCACGAATCCGTACAGCAGA 6837 | |||||| ||||||||| || || |||||||| || || | ||| ||||||| || Sbjct 1693 TCCTTCAGACTGTCGTTGATGCCGTCGCCTCCGCAGATCGGAATGAACCCGTACAACAAG 1634 Query 6838 TGTGTGAGATTGGGAATGGGGATTCTGTCGGCGGGAAACTGTCTGTCGTAAACACCCCAC 6897 || || |||||||| || || | | ||| |||| |||| || || || ||||| Sbjct 1633 TGAGTCAGATTGGGGATCGGCACGCGGTCCACGGGGAACTTCCTCGGATACACTCCCCAT 1574 Query 6898 TCCACGAAGTAAGCTCCGA 6916 || |||||||||||||||| Sbjct 1573 TCTACGAAGTAAGCTCCGA 1555 >seq131720 Length=1042 Score = 129 bits (142), Expect = 4e-25 Identities = 382/586 (65%), Gaps = 25/586 (4%) Strand=Plus/Minus Query 5744 ACCCTTGATTCATGGAGTTTAACAAGTCGCCGTTGTCCGCGTCGATTTCCCATCCAAATA 5803 |||| || ||||| | || || | ||| || ||||||||||| |||||||| | || | Sbjct 676 ACCCATG-TTCATAGCATTCAATATGTCACCATTGTCCGCGTCAATTTCCCACGCGAACA 618 Query 5804 GACCCCCCAGCCCCTTTTGGATGACATATTTTCCCTTGGCCGTCACGGACCTCTCGTCGT 5863 ||| |||| || | |||| ||||| || || | | || || || | |||| Sbjct 617 AACCACCCAATTTGTTATTTCTGACGTATTTGCCTTTCTCTATAACTGATCTGGCATCGT 558 Query 5864 CGTAGGTGACGAGATCGTCGTTGTGGT------ACACGTAGGGCGCTTGCGCCACTCCGT 5917 |||| || | ||||| || || | ||||||| |||||||| ||||| | Sbjct 557 CGTACGTTATTAGATCTCCGGTGGCCTTCCTGAACACGTATGGCGCTTGTGCCACCTTAT 498 Query 5918 CGTAAT-----TCGGGTT--------GGGATACCGGTTCGTGATGTCTTTGTAGTCCACG 5964 | |||| || || | ||| | | | || ||| |||||||||| Sbjct 497 CATAATGGTACTCCCATTTCCCAGCAGCTATATCATCTGCT-ATTTCTCTGTAGTCCACC 439 Query 5965 ACACCGTTTTCCCAGGAACCCTTTACGGGACCCGTGGCAGTGCCTGTGAAGGGATTGTTG 6024 ||||| | || ||| | ||| || || |||||||| ||| |||| ||||| ||||||| Sbjct 438 ACACCATCTTGCCAAGTACCTTTAACAGGACCCGTTGCATTGCCAGTGAAAGGATTGTCA 379 Query 6025 --TTGGTGATGTTGTGGATTCCACGCCATCCCCTGCCGTACATGGCCACGCCCACCACCA 6082 || | | ||||| || ||| || | ||||||||||| || || ||||| | Sbjct 378 CCTTCATAACC--GTGGACACCGGTCCAGCCACGTCCGTACATGGCAACACCAACCACAA 321 Query 6083 ATTTGTTTGGGTTCACGCTCTGATTGAGCAGGCGTTGGACGGCGAACGCGGTGGTGTACT 6142 || || || ||||| | || | || | || ||| |||| | || ||||| Sbjct 320 TCTTCTTAGGATTCACACCTTGCGCCAACAAGTATTTCACGCCGAAATCAGTCGTGTAAG 261 Query 6143 TTTCGGTGGGGTTCCATGTGGGCGCGTACAGGGGCGTCTGCAGTCCCAGATCGGTGTTAG 6202 | || | || | ||| | || |||||||| | | ||| | || ||| || | Sbjct 260 TCTCCTTCGGCTGCCAAGATGGAGCGTACAGAGAAGCCTGGTGACCAAGAGTATCATTGG 201 Query 6203 ACCAGGCTCCCTTGAAATCGTACGTCATGACGAAAATATGATCCAGATACTCCTGCACCG 6262 |||| ||||||||||||||||| |||||| ||| || || |||| || | |||| | | Sbjct 200 ACCACGCTCCCTTGAAATCGTAGCTCATGAAGAATATGTGGTCCATGTATTTCTGCGCTG 141 Query 6263 CACCGTATTCTACAACGTTTATTTTGTCGTAGCCCCCGCTGATGGC 6308 | | ||| || || || | || ||||| | || | |||||||| Sbjct 140 CGCTGTAATCGACGACTTGGATCTTGTCCCAACCAGCACTGATGGC 95 >seq15021 Length=1916 Score = 118 bits (130), Expect = 8e-22 Identities = 175/246 (71%), Gaps = 4/246 (2%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||| || || ||||||| |||||| || || || || || |||||||| | Sbjct 954 CCTCCTCTGAGCCTTAACACCAAGTGAAGAGTAGATTCTTTCTGAATATTGTAATCAGAA 895 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 ||| ||| |||| |||| || || || ||||||||||| || || ||||| | ||| Sbjct 894 AGTGTGCGGCCGTCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCAGGAGGA 835 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | ||| || || || ||||| |||| || |||| ||||||| | |||||| Sbjct 834 ATACCCTCTTTATCTTGAATCTTGGCTTTCACATTTTCTATAGTGTCGGAAGCCTCCACC 775 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATGTGAA--TGA 44348 || | || || ||||| ||||| ||||| || ||||| || ||||| ||| || ||| Sbjct 774 TCTAGGGTGATGGTCTTCCCCGTTAGGGTTTTTACGAATATCTGCAT--TGTAAAACTGA 717 Query 44349 AAATAG 44354 ||| || Sbjct 716 AAAGAG 711 >seq67196 Length=1848 Score = 104 bits (114), Expect = 2e-17 Identities = 142/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 || ||||| || |||||||| | | || |||| |||| |||||| || ||||| Sbjct 732 TCTTTTTGAATATTGTAATCTGACAAAGTACGGCCGTCTTCCAACTGCTTTCCAGCAAAA 791 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 |||| |||||||||||||| || | |||||| || ||| ||||| |||| || ||| Sbjct 792 ATCAGACGCTGCTGATCTGGGGGGATACCTTCTTTGTCCTGAATCTT-AGCTTTAACGTT 850 Query 44267 C-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | || || || | | ||| || |||| || ||||| ||||| || | || ||||| Sbjct 851 CTCGATAGTATCTGAAGGTTCGACTTCCAAGGTGATCGTTTTTCCAGTCAAAGTTTTCAC 910 Query 44326 GAAGATTTGCATGATG 44341 ||| || ||||| ||| Sbjct 911 GAAAATCTGCATTATG 926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358906439993871