Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq131719 140 2e-28
seq131720 129 4e-25
seq15021 118 8e-22
seq67196 104 2e-17
>seq131719
Length=2163
Score = 140 bits (154), Expect = 2e-28
Identities = 332/499 (67%), Gaps = 12/499 (2%)
Strand=Plus/Minus
Query 6424 GGATTGGCTCCCTTGCCTCCGGGAAATTCCCAATCTATGTCCACGCCGTCGAAGAACTTC 6483
|| || || || || ||||| || || |||||||| || || |||||||| ||||| |||
Sbjct 2047 GGGTTAGCGCCTTTACCTCCAGGGAACTCCCAATCGATATCGACGCCGTCAAAGAATTTC 1988
Query 6484 CAAGTTTCCAGAAATTCTTCGACGCTCTCTACGAACACCTTTCTTTTAATCGTGTCGTTG 6543
|| || | || || |||| ||| | ||||| | | || || |||| ||
Sbjct 1987 CAGGTCTGGAGGAAGTCTTTTACGGAAGCAACGAAACGGTCACGCTTTGTCTTGTCAGTG 1928
Query 6544 AGCTGGTAAAAG---GGATCGCTCAGCGTCCACCCACCGATCGAGGGCAGGATGGTCAGA 6600
| | ||||| ||||| || ||||| || |||| || |||| || | ||
Sbjct 1927 AA---GAAAAAGAATGGATCAGCCAAAGTCCAGCCGCCGACGGAAGGCAAAATCTTGAGG 1871
Query 6601 TGCGGATTG---TGTTTTCGTATGGCCATAAGCTGACCGAAATTACCCTTGTACATTTCC 6657
| || | ||||| || ||| || || ||||| || || ||||| |||
Sbjct 1870 TCTGGTCTCGCCTGTTTCAACAT---CATCAGTTGGCCGAAGTTTCCTTTGTAAGGTTCG 1814
Query 6658 GAGTAGGCCTCGACGCCCTTCTGGGGTTTTTGTAGTGCGCCCCATATATCGTGTATGGAC 6717
| | | |||||| || ||||| || || ||| |||| || || ||||||
Sbjct 1813 TTCCATGAAGAAAGGCCCTTTTGTGGTTTCTGAAGAGCGGCCCAGGGGTCATGAATGGAC 1754
Query 6718 ACCTTGAAGTCGTCTCGTCCCTCGCACGATCGCTGCAGAGCTTCGAACGAGCCCGGCACC 6777
|| |||||||| || || || ||| || ||||| || || | ||| |||| | |
Sbjct 1753 ACTTTGAAGTCTTCGCGGCCGCTGCAGGAACGCTGGAGTGCCTGGAAACTGCCCTCAATC 1694
Query 6778 TGTTTCAGAGCGTCGTTGATACCATCCCCTCCGCACATGGGCACGAATCCGTACAGCAGA 6837
| |||||| ||||||||| || || |||||||| || || | ||| ||||||| ||
Sbjct 1693 TCCTTCAGACTGTCGTTGATGCCGTCGCCTCCGCAGATCGGAATGAACCCGTACAACAAG 1634
Query 6838 TGTGTGAGATTGGGAATGGGGATTCTGTCGGCGGGAAACTGTCTGTCGTAAACACCCCAC 6897
|| || |||||||| || || | | ||| |||| |||| || || || |||||
Sbjct 1633 TGAGTCAGATTGGGGATCGGCACGCGGTCCACGGGGAACTTCCTCGGATACACTCCCCAT 1574
Query 6898 TCCACGAAGTAAGCTCCGA 6916
|| ||||||||||||||||
Sbjct 1573 TCTACGAAGTAAGCTCCGA 1555
>seq131720
Length=1042
Score = 129 bits (142), Expect = 4e-25
Identities = 382/586 (65%), Gaps = 25/586 (4%)
Strand=Plus/Minus
Query 5744 ACCCTTGATTCATGGAGTTTAACAAGTCGCCGTTGTCCGCGTCGATTTCCCATCCAAATA 5803
|||| || ||||| | || || | ||| || ||||||||||| |||||||| | || |
Sbjct 676 ACCCATG-TTCATAGCATTCAATATGTCACCATTGTCCGCGTCAATTTCCCACGCGAACA 618
Query 5804 GACCCCCCAGCCCCTTTTGGATGACATATTTTCCCTTGGCCGTCACGGACCTCTCGTCGT 5863
||| |||| || | |||| ||||| || || | | || || || | ||||
Sbjct 617 AACCACCCAATTTGTTATTTCTGACGTATTTGCCTTTCTCTATAACTGATCTGGCATCGT 558
Query 5864 CGTAGGTGACGAGATCGTCGTTGTGGT------ACACGTAGGGCGCTTGCGCCACTCCGT 5917
|||| || | ||||| || || | ||||||| |||||||| ||||| |
Sbjct 557 CGTACGTTATTAGATCTCCGGTGGCCTTCCTGAACACGTATGGCGCTTGTGCCACCTTAT 498
Query 5918 CGTAAT-----TCGGGTT--------GGGATACCGGTTCGTGATGTCTTTGTAGTCCACG 5964
| |||| || || | ||| | | | || ||| ||||||||||
Sbjct 497 CATAATGGTACTCCCATTTCCCAGCAGCTATATCATCTGCT-ATTTCTCTGTAGTCCACC 439
Query 5965 ACACCGTTTTCCCAGGAACCCTTTACGGGACCCGTGGCAGTGCCTGTGAAGGGATTGTTG 6024
||||| | || ||| | ||| || || |||||||| ||| |||| ||||| |||||||
Sbjct 438 ACACCATCTTGCCAAGTACCTTTAACAGGACCCGTTGCATTGCCAGTGAAAGGATTGTCA 379
Query 6025 --TTGGTGATGTTGTGGATTCCACGCCATCCCCTGCCGTACATGGCCACGCCCACCACCA 6082
|| | | ||||| || ||| || | ||||||||||| || || ||||| |
Sbjct 378 CCTTCATAACC--GTGGACACCGGTCCAGCCACGTCCGTACATGGCAACACCAACCACAA 321
Query 6083 ATTTGTTTGGGTTCACGCTCTGATTGAGCAGGCGTTGGACGGCGAACGCGGTGGTGTACT 6142
|| || || ||||| | || | || | || ||| |||| | || |||||
Sbjct 320 TCTTCTTAGGATTCACACCTTGCGCCAACAAGTATTTCACGCCGAAATCAGTCGTGTAAG 261
Query 6143 TTTCGGTGGGGTTCCATGTGGGCGCGTACAGGGGCGTCTGCAGTCCCAGATCGGTGTTAG 6202
| || | || | ||| | || |||||||| | | ||| | || ||| || |
Sbjct 260 TCTCCTTCGGCTGCCAAGATGGAGCGTACAGAGAAGCCTGGTGACCAAGAGTATCATTGG 201
Query 6203 ACCAGGCTCCCTTGAAATCGTACGTCATGACGAAAATATGATCCAGATACTCCTGCACCG 6262
|||| ||||||||||||||||| |||||| ||| || || |||| || | |||| | |
Sbjct 200 ACCACGCTCCCTTGAAATCGTAGCTCATGAAGAATATGTGGTCCATGTATTTCTGCGCTG 141
Query 6263 CACCGTATTCTACAACGTTTATTTTGTCGTAGCCCCCGCTGATGGC 6308
| | ||| || || || | || ||||| | || | ||||||||
Sbjct 140 CGCTGTAATCGACGACTTGGATCTTGTCCCAACCAGCACTGATGGC 95
>seq15021
Length=1916
Score = 118 bits (130), Expect = 8e-22
Identities = 175/246 (71%), Gaps = 4/246 (2%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| ||||| || || ||||||| |||||| || || || || || |||||||| |
Sbjct 954 CCTCCTCTGAGCCTTAACACCAAGTGAAGAGTAGATTCTTTCTGAATATTGTAATCAGAA 895
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
||| ||| |||| |||| || || || ||||||||||| || || ||||| | |||
Sbjct 894 AGTGTGCGGCCGTCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCAGGAGGA 835
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| ||| || || || ||||| |||| || |||| ||||||| | ||||||
Sbjct 834 ATACCCTCTTTATCTTGAATCTTGGCTTTCACATTTTCTATAGTGTCGGAAGCCTCCACC 775
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATGTGAA--TGA 44348
|| | || || ||||| ||||| ||||| || ||||| || ||||| ||| || |||
Sbjct 774 TCTAGGGTGATGGTCTTCCCCGTTAGGGTTTTTACGAATATCTGCAT--TGTAAAACTGA 717
Query 44349 AAATAG 44354
||| ||
Sbjct 716 AAAGAG 711
>seq67196
Length=1848
Score = 104 bits (114), Expect = 2e-17
Identities = 142/196 (72%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206
|| ||||| || |||||||| | | || |||| |||| |||||| || |||||
Sbjct 732 TCTTTTTGAATATTGTAATCTGACAAAGTACGGCCGTCTTCCAACTGCTTTCCAGCAAAA 791
Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266
|||| |||||||||||||| || | |||||| || ||| ||||| |||| || |||
Sbjct 792 ATCAGACGCTGCTGATCTGGGGGGATACCTTCTTTGTCCTGAATCTT-AGCTTTAACGTT 850
Query 44267 C-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| | || || || | | ||| || |||| || ||||| ||||| || | || |||||
Sbjct 851 CTCGATAGTATCTGAAGGTTCGACTTCCAAGGTGATCGTTTTTCCAGTCAAAGTTTTCAC 910
Query 44326 GAAGATTTGCATGATG 44341
||| || ||||| |||
Sbjct 911 GAAAATCTGCATTATG 926
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 358906439993871
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |