Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq67196 167 6e-36
seq193007 138 3e-27
>seq67196
Length=1848
Score = 167 bits (184), Expect = 6e-36
Identities = 166/215 (77%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||||||||||||| | || ||||||||||||||| | || || ||| |||||
Sbjct 919 CAGATTTTCGTGAAAACTTTGACTGGAAAAACGATCACCTTGGAAGTCGAACCTTCAGAT 860
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||||||||| ||| |||||||||||||||||||| ||||| || || |||||
Sbjct 859 ACTATCGAGAACGTTAAAGCTAAGATTCAGGACAAAGAAGGTATCCCCCCAGATCAGCAG 800
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || || || ||||| ||| | ||||| || | ||| | | ||||| || |
Sbjct 799 CGTCTGATTTTTGCTGGAAAGCAGTTGGAAGACGGCCGTACTTTGTCAGATTACAATATT 740
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
||||||||||| || | ||||||||| | ||||
Sbjct 739 CAAAAAGAATCCACTTTACATCTTGTTCTACGACT 705
Score = 147 bits (162), Expect = 5e-30
Identities = 162/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || ||||| | || || ||||| ||||| || || || || || |||
Sbjct 463 CAGATCTTTGTTAAAACCTTGACTGGTAAAACTATCACTCTAGAAGTTGAGCCATCTGAC 404
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || |||||| ||||||||||| || ||||| || || || || || |||
Sbjct 403 ACCATTGAAAATGTCAAAGCCAAGATTCAGGATAAGGAAGGTATTCCGCCAGATCAACAA 344
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || ||||||||||| |||||||| | || || | || ||||| ||
Sbjct 343 CGTCTGATCTTTGCTGGAAAACAGCTTGAAGATGGCCGCACCCTATCTGACTATAATATC 284
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
||||||||||| || || ||||| |||||| | |||
Sbjct 283 CAAAAAGAATCCACCCTTCATCTGGTTTTGCGTCTC 248
>seq193007
Length=659
Score = 138 bits (152), Expect = 3e-27
Identities = 156/208 (75%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || || || || || ||||| ||||| | || || ||| || |||
Sbjct 627 CAGATCTTTGTCAAGACACTTACTGGCAAAACTATCACTTTAGAAGTTGAACCATCGGAC 568
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || ||||| |||||| || ||||| ||||||||||| || || || ||||| ||
Sbjct 567 ACTATTGAGAATGTCAAAGCCAAAATTCAAGACAAAGAAGGTATTCCCCCAGACCAACAG 508
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| |||||||| || |||||||| || ||||||||| | || || |||| || || ||
Sbjct 507 CGTCTTATCTTTGCTGGAAAACAACTTGAAGATGGACGCACACTATCCGACTACAATATC 448
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131
|| |||||||| ||| |||| |||| ||
Sbjct 447 CAGAAAGAATCTACATTGCA-CTTGGTT 421
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1199920795281222
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |