Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_003315.1
Length=31508
Score E
Sequences producing significant alignments: (Bits) Value
seq20099 122 2e-23
>seq20099
Length=4024
Score = 122 bits (134), Expect = 2e-23
Identities = 75/80 (94%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417
|||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||
Sbjct 1689 TGGTGGGTCGTGAAGGGCTCGAACCTTCGACCTACGGATTAAGAGTCCGCTGCTCTACCA 1748
Query 418 ACTGAGCTAACGACCCAATT 437
||||||||||||||||||||
Sbjct 1749 ACTGAGCTAACGACCCAATT 1768
Score = 98.7 bits (108), Expect = 2e-16
Identities = 57/59 (97%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACC 416
||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct 1789 TGGTGGGTCGTGAAGGACTCGAACCTTCGACCAACGGATTAAAAGTCCGATGCTCTACC 1847
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 100668510462780
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |