Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_004629.1 Length=280334 Score E Sequences producing significant alignments: (Bits) Value seq29401 84.2 4e-11 >seq29401 Length=2905 Score = 84.2 bits (92), Expect = 4e-11 Identities = 75/94 (80%), Gaps = 5/94 (5%) Strand=Plus/Plus Query 272872 TGGTGGGCCCAGCAGGACTTGAACCTGCGACCAAGCGATTATGAGTCGCCTGCTCTAACC 272931 ||||||| | | ||||||||||||| ||||||| ||||||||| ||||||||||| Sbjct 229 TGGTGGGACTGGTAGGACTTGAACCTACGACCAATTCATTATGAGTGAACTGCTCTAACC 288 Query 272932 AACTGAGCTATAGGCCCTTTT-----TATTTATT 272960 |||||||||| || ||| ||| |||||||| Sbjct 289 AACTGAGCTACAGTCCCATTTGTCGATATTTATT 322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 896608068598480