Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_005066.1
Length=164018
Score E
Sequences producing significant alignments: (Bits) Value
seq7918 158 1e-33
>seq7918
Length=32631
Score = 158 bits (174), Expect = 1e-33
Identities = 290/419 (69%), Gaps = 6/419 (1%)
Strand=Plus/Plus
Query 135788 CAGGTTATTAATCTGTACGCCGTAATCAAGATGACGAATGCGGTTATCTTCCACCCCCTT 135847
||| || || | |||||| || ||||| ||||| || | || || || || || |||
Sbjct 18035 CAGTTTGTTCAGCTGTACCCCATAATCCAGATGGCGTACCCGATTTTCCTCAACGCCCCG 18094
Query 135848 ATTGTTCTTTAACACAATCAGACTTTCAAACTCTAAATGCCACATTGGGTAATAGAGAGT 135907
|||||| |||||||| | ||| ||| | || |||||| | || || |||| ||
Sbjct 18095 ATTGTTTTTTAACACTAACAGGGCTTCTACTTCGCGATGCCATAGCGGATAGAAGAGGGT 18154
Query 135908 CGCCGCCCCGCCACGAATACCGCCTTGTGAGCATGACTTAACGGCAGTCTGAAAATGTTT 135967
|| || || || || | ||||||||| ||||| || || ||||| || || ||||||||
Sbjct 18155 AGCGGCTCCCCCGCGCACACCGCCTTGGGAGCACGATTTGACGGCTGTTTGGAAATGTTT 18214
Query 135968 CCAGAATGGGATAACGCCAGTATGACGAACTTCACCATGCC-CGATCTTAGAT-CCTTCC 136025
| || || ||| ||| |||||| | ||||| ||| ||| | | |||
Sbjct 18215 GTAAAAAGGAATACAGCCGGTATGAAAGGCCTCACC--GCCGCGAATGGGGCTGCCTAAG 18272
Query 136026 GCGCGAATCATACCAGCGTTGATACCGATGCCAGCACGCTTGCTA-ATATACTTGATGAT 136084
||||| ||| | || || || || || || || ||||| ||| | | || || | ||
Sbjct 18273 GCGCGGATCTTGCCGGCATTAATCCCAATACCGGCACG-TTGAGAGACGTATTTCACAAT 18331
Query 136085 TGCATTTGCTGTTTCGTTGATGCCCTGCAATGAGTCATCACTTTCAATCACCACGCACGA 136144
||| | || || | |||||| | || || ||| || || | ||| || ||
Sbjct 18332 GGCACTGGCGGTGGCATTGATGGAGTCTAAACTATCTGCACACTCGATTAACACACAAGA 18391
Query 136145 ACTAAATTGTCGTGTTGGAGTACGCACACCCGCCATAATCGGAGTAGGCAGAGAGATTT 136203
|||||||| || ||||| ||||| |||||||||||||||||||||||||| || ||||
Sbjct 18392 GCTAAATTGACGGGTTGGGGTACGAACACCCGCCATAATCGGAGTAGGCAGCGAAATTT 18450
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 524534944995760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |