Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_005260.1 Length=233234 Score E Sequences producing significant alignments: (Bits) Value seq29593 86.0 9e-12 >seq29593 Length=7136 Score = 86.0 bits (94), Expect = 9e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 108210 TGCGAGTGGTGGATTTGAACCACCGACCTTTAGCTTATGAGGCTAACGAGATACCGGACT 108269 |||||| | ||||||||||||| ||||||| || ||||||| || ||||| |||| |||| Sbjct 3493 TGCGAGGGCTGGATTTGAACCAACGACCTTCAGGTTATGAGCCTGACGAGCTACCAGACT 3552 Query 108270 TCTCCAACTCGCATCAT 108286 ||||| ||||| |||| Sbjct 3553 GCTCCACCTCGCGTCAT 3569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 745943980066480