Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_005344.1
Length=39043
Score E
Sequences producing significant alignments: (Bits) Value
seq22402 80.6 7e-11
>seq22402
Length=4759
Score = 80.6 bits (88), Expect = 7e-11
Identities = 127/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 21624 TCCTGTCCGCTTTGATCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGATAAACCTCA 21683
||||| || |||||| |||||||| | || || || |||||||| |||||||
Sbjct 203 TCCTGCCCCGCTTGATCTTGCCATTTACGCGTTCGTAAGCGACCTTCAAGGTAAACCTTG 144
Query 21684 GAGCCTTTTCGCAGATATTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATTACCACGCGG 21743
| || || ||||| || || | |||||||||||| | | | | || || ||
Sbjct 143 GCACCCTTACGCAGGTACTCTCCGGCAATTTCTGCTAAACGTCGGTAGAGCACGACACGA 84
Query 21744 TGCCACTCCGTCTGCTCCTTTTGCTCTCCAGTTTGCTTATCACGCCATTGTTCTGACGTA 21803
|||||||||||| |||||| || || |||| ||||||||||| |||||| ||
Sbjct 83 TGCCACTCCGTCAACTCCTTCTGTTCGCCAGAGGCTTTATCACGCCAACTTTCTGAGGTG 24
Query 21804 GC 21805
||
Sbjct 23 GC 22
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124772013047370
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |