Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_006949.1
Length=46900
Score E
Sequences producing significant alignments: (Bits) Value
seq22402 93.3 1e-14
>seq22402
Length=4759
Score = 93.3 bits (102), Expect = 1e-14
Identities = 123/171 (72%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 32968 TTGGTCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGATAAACCTCAGAGCCTTTTCG 33027
||| || |||||||| | || || || |||||||| ||||||| | || || ||
Sbjct 192 TTGATCTTGCCATTTACGCGTTCGTAAGCGACCTTCAAGGTAAACCTTGGCACCCTTACG 133
Query 33028 CAGATACTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATCACCACACGGTGCCACTCCGT 33087
||| ||||| | |||||||||||| | | | | ||| ||||| |||||||||||
Sbjct 132 CAGGTACTCTCCGGCAATTTCTGCTAAACGTCGGTAGAGCACGACACGATGCCACTCCGT 73
Query 33088 CTGCTCCTTTTGCTCGCCAGTATTTTTATCTCGCCATTGTTCTGACGTAGC 33138
| |||||| || ||||||| |||||| ||||| |||||| || ||
Sbjct 72 CAACTCCTTCTGTTCGCCAGAGGCTTTATCACGCCAACTTTCTGAGGTGGC 22
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 149905552504188
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |