Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_012741.1
Length=171451
Score E
Sequences producing significant alignments: (Bits) Value
seq7918 129 6e-25
>seq7918
Length=32631
Score = 129 bits (142), Expect = 6e-25
Identities = 279/416 (67%), Gaps = 6/416 (1%)
Strand=Plus/Plus
Query 142995 CAGGTCGTTTAACTGGATTCCGTAGTCCATATGACGAATACGGTTTTCATCGACACCTTT 143054
||| | ||| | ||| | || || |||| ||| || | || ||||| || || ||
Sbjct 18035 CAGTTTGTTCAGCTGTACCCCATAATCCAGATGGCGTACCCGATTTTCCTCAACGCCCCG 18094
Query 143055 GTTGTTTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGT 143114
|||||||| | || | ||| ||| ||||| |||||| | ||||| | ||
Sbjct 18095 ATTGTTTTTTAACACTAACAGGGCTTCTACTTCGCGATGCCATAGCGGATAGAAGAGGGT 18154
Query 143115 AGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTT 143174
||| || || || || | || ||||| || || ||||| || || || |||||||||||
Sbjct 18155 AGCGGCTCCCCCGCGCACACCGCCTTGGGAGCACGATTTGACGGCTGTTTGGAAATGTTT 18214
Query 143175 CCAGAATGGAATAACACCAGTATGTTTGACTTCACCCATGCCAATACGAGAACCTTCAGC 143234
| || |||||| || ||||| | | ||||| || ||| | ||| ||
Sbjct 18215 GTAAAAAGGAATACAGCCGGTATGAAAGGCCTCACCGCCGCGAATGGGGCTGCCTAAGGC 18274
Query 143235 ACGAATCATACCAACGTTAATACCAATACCTGCACGTTTAGAAATGTATTCAATTATTGA 143294
|| ||| | || | ||||| |||||||| ||||||| ||| | ||||| | || |
Sbjct 18275 GCGGATCTTGCCGGCATTAATCCCAATACCGGCACGTTGAGAGACGTATTTCACAATGGC 18334
Query 143295 GTTTGCAGTTTTGTTAATAGATTTCAGTGAGTCACCTGC---TTCAATAACAACACAAGA 143351
| || || || || || | | | | |||| || || | ||||||||
Sbjct 18335 ACTGGCGGTGGCATTGATGGAGT---CTAAACTATCTGCACACTCGATTAACACACAAGA 18391
Query 143352 ACTAAATTGACGGGTTGGAGTACGTGCACCAGCCATAATAGGAGTAGGCAACGAAA 143407
||||||||||||||||| ||||| |||| |||||||| |||||||||| |||||
Sbjct 18392 GCTAAATTGACGGGTTGGGGTACGAACACCCGCCATAATCGGAGTAGGCAGCGAAA 18447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548311721430120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |