Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_013055.1 Length=39896 Score E Sequences producing significant alignments: (Bits) Value seq6010 91.5 4e-14 >seq6010 Length=9096 Score = 91.5 bits (100), Expect = 4e-14 Identities = 99/129 (77%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 8999 CCGACGTGATCCTCTTTATCTACCGCGATGAGGTCTATAACCCCGACAGCGCAGATCGCG 9058 ||||| ||||||| ||||||||||| |||||||||||| | |||| ||| | | Sbjct 4857 CCGACTTGATCCTATTTATCTACCGGGATGAGGTCTATCATGAGAACAGT-CAGCTGAAG 4915 Query 9059 GTACG-GCCGAAATCATCATTGCGAAGCAGCGAAACGGGCCGATTGGCACCGTACGGCTC 9117 | | || ||||||||||||| || ||||| ||||| || |||||||||||||| ||| Sbjct 4916 GGAATTGCAGAAATCATCATTGGCAAACAGCGTAACGGCCCAATTGGCACCGTACGCCTC 4975 Query 9118 GCATTCCAG 9126 | || ||| Sbjct 4976 ACCTTTCAG 4984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127500651097092