Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq3668 111 2e-19 >seq3668 Length=32275 Score = 111 bits (122), Expect = 2e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || |||||||| ||||| ||||| | || || ||||||||||| | || || ||| | Sbjct 30671 AAGATGCAAATCTTCGTCAAAACATTAACTGGTAAAACCATCACTTTGGAAGTTGAGCCT 30730 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | ||| | || | ||| |||| |||||||| |||||||| | || Sbjct 30731 TCTGACACTATCGAAAATGTCAAGGCAAAGATCCAAGACAAAGAAGGAATTCCACCAGAT 30790 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 ||||| || | || | ||| || ||||| |||| || | || || | | |||||| Sbjct 30791 CAACAACGTTTAATCTTCGCTGGTAAACAATTGGAAGATGGACGTACATTGAGTGACTAC 30850 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || |||||||||||| | || |||||||||| || ||| Sbjct 30851 AATATCCAAAAGGAATCAACATTGCATTTGGTTCTTCGT 30889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499987254647680