Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_014036.1 Length=174436 Score E Sequences producing significant alignments: (Bits) Value seq7918 168 7e-37 >seq7918 Length=32631 Score = 168 bits (186), Expect = 7e-37 Identities = 286/412 (69%), Gaps = 2/412 (0%) Strand=Plus/Minus Query 41085 AAACTGTCTCTACCGACTCCAATTATGGCGGGTGTACGTACTCCTACGCGCCAGTTCTCC 41144 ||| | || || || ||||| |||||||||||||| ||||| || || || || || | Sbjct 18451 AAAATTTCGCTGCCTACTCCGATTATGGCGGGTGTTCGTACCCCAACCCGTCAATTTAGC 18392 Query 41145 AGTTGTGTAGTAATTGAATCGGGTGATTCTCTTGGTTCTCTTAACGCTGTAACCTCTGCG 41204 |||||| |||| || | | ||| | | | || | || || || ||| Sbjct 18391 TCTTGTGTGTTAATCGAGTGTGCAGATAGTTTAGACTCCATCAATGCCACCGCCAGTGCC 18332 Query 41205 ATCGTGAAGTATATTTCACAACGTGCTGGTATTGGGGTTAACGCGGGACATATTCGCGCA 41264 || ||||| || | || |||||||| ||||||||| |||| || || | || ||||| Sbjct 18331 ATTGTGAAATACGTCTCTCAACGTGCCGGTATTGGGATTAATGCCGGCAAGATCCGCGCC 18272 Query 41265 ATGGGTTCTAAAATCCGTGGTGGTGAAGCTGTTCATACTGG-TGTGATTCCTTTCTGGAA 41323 | || || || || ||||| || ||||||| || ||| |||||||| | || Sbjct 18271 TTAGGCAGCCCCATTCGCGGCGGTGAGGCCTTTCATACCGGCTGT-ATTCCTTTTTACAA 18213 Query 41324 ACATATCCAAACCGCTGTTAAATCCTGTTCACAGGGTGGCGTTCGTGGTGGTGCTGCAAC 41383 |||| ||||||| || || ||||| || || || || || || || || || || || || Sbjct 18212 ACATTTCCAAACAGCCGTCAAATCGTGCTCCCAAGGCGGTGTGCGCGGGGGAGCCGCTAC 18153 Query 41384 ACTGTATTATCCTTTCTGGCATCTGGAAGTTGAAAACCTTCTGGTGTTGAAGAACAACAA 41443 || | ||||| | ||||||| ||||| ||| ||| | ||||| || ||||| Sbjct 18152 CCTCTTCTATCCGCTATGGCATCGCGAAGTAGAAGCCCTGTTAGTGTTAAAAAACAATCG 18093 Query 41444 AGGCGTAGAAGAAAACCGCGTTCGTCATCTTGATTACGGTGTACAGCTTAAC 41495 ||||| || ||||| || || || ||||| ||||| || |||||||| ||| Sbjct 18092 GGGCGTTGAGGAAAATCGGGTACGCCATCTGGATTATGGGGTACAGCTGAAC 18041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557860177996320