Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_014260.1 Length=172253 Score E Sequences producing significant alignments: (Bits) Value seq7918 123 3e-23 >seq7918 Length=32631 Score = 123 bits (136), Expect = 3e-23 Identities = 273/407 (67%), Gaps = 2/407 (0%) Strand=Plus/Plus Query 144918 TTCAACTGGATTCCGTAGTCCATATGTCGAATACGGTTTTCATCAACGCCCTTGTTATTT 144977 |||| ||| | || || |||| ||| || | || ||||| ||||||||| || ||| Sbjct 18042 TTCAGCTGTACCCCATAATCCAGATGGCGTACCCGATTTTCCTCAACGCCCCGATTGTTT 18101 Query 144978 TTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCG 145037 || | || | ||| ||| ||||| |||||| | ||||| | ||||| || Sbjct 18102 TTTAACACTAACAGGGCTTCTACTTCGCGATGCCATAGCGGATAGAAGAGGGTAGCGGCT 18161 Query 145038 CCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAAT 145097 || || || | || ||||| || || ||||| || || || ||||||||||| | || Sbjct 18162 CCCCCGCGCACACCGCCTTGGGAGCACGATTTGACGGCTGTTTGGAAATGTTTGTAAAAA 18221 Query 145098 GGAATAACACCGGTATGTTTGACTTCACCCATGCCAATACGAGAACCTTCAGCACGAATC 145157 |||||| |||||||| | | ||||| || ||| | ||| || || ||| Sbjct 18222 GGAATACAGCCGGTATGAAAGGCCTCACCGCCGCGAATGGGGCTGCCTAAGGCGCGGATC 18281 Query 145158 ATACCAACGTTGATACCAATACCTGCACGTTTAGAAATGTATTCAATTATCGAGTTAGCA 145217 | || | || || |||||||| ||||||| ||| | ||||| | || | | || Sbjct 18282 TTGCCGGCATTAATCCCAATACCGGCACGTTGAGAGACGTATTTCACAATGGCACTGGCG 18341 Query 145218 GTTTTGTTAATAGA-TTTCAGCGAGTCGCCTGCTTCAATAACCACACAAGAACTAAATTG 145276 || || || || | | | | | || | || || | ||||||||| |||||||| Sbjct 18342 GTGGCATTGATGGAGTCTAAACTA-TCTGCACACTCGATTAACACACAAGAGCTAAATTG 18400 Query 145277 GCGAGTCGGTGTACGCGCTCCAGCCATAATAGGGGTAGGCAACGAAA 145323 || || || ||||| | || |||||||| || ||||||| ||||| Sbjct 18401 ACGGGTTGGGGTACGAACACCCGCCATAATCGGAGTAGGCAGCGAAA 18447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 550877169391960