Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_014461.1 Length=73453 Score E Sequences producing significant alignments: (Bits) Value seq20099 82.4 4e-11 >seq20099 Length=4024 Score = 82.4 bits (90), Expect = 4e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 61302 TCGTTAGCTCAGTTGGTAGAGCTGCCGACTCTTAATCGGTAGGTCGCAGGTTCAAATCCT 61361 |||||||||||||||||||||| || ||||||||||| |||||||| |||||| | ||| Sbjct 1761 TCGTTAGCTCAGTTGGTAGAGCAGCGGACTCTTAATCCGTAGGTCGAAGGTTCGAGCCCT 1702 Query 61362 GCACG 61366 |||| Sbjct 1701 TCACG 1697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 234839830416158