Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_014467.1
Length=176788
Score E
Sequences producing significant alignments: (Bits) Value
seq7918 172 6e-38
>seq7918
Length=32631
Score = 172 bits (190), Expect = 6e-38
Identities = 288/415 (69%), Gaps = 6/415 (1%)
Strand=Plus/Minus
Query 41133 TAAACTGTCATTACCTACGCCTATTATGGCGGGTGTGCGTACTCCTACGCGTCAGTTCTC 41192
|||| | || | ||||| || |||||||||||||| ||||| || || ||||| ||
Sbjct 18452 TAAAATTTCGCTGCCTACTCCGATTATGGCGGGTGTTCGTACCCCAACCCGTCAATTTAG 18393
Query 41193 CAGTTGTGTTGTAATCGAATCTGGTGATTCTCTGGGTTCTCTGAACGCTGTTACGTCC-- 41250
| |||||| ||||||| | || ||| | | | || | || || || ||
Sbjct 18392 CTCTTGTGTGTTAATCGAGTGTGCAGATAGTTTAGACTCCATCAA---TGCCACCGCCAG 18336
Query 41251 -GCGATCGTGAAATATATCTCTCAACGTGCGGGTATCGGTGTCAACGCCGGACACATTCG 41309
|| || |||||||| ||||||||||||| ||||| || | || ||||| | || ||
Sbjct 18335 TGCCATTGTGAAATACGTCTCTCAACGTGCCGGTATTGGGATTAATGCCGGCAAGATCCG 18276
Query 41310 CGCTATGGGTTCAAAAATCCGTGGTGGTGAAGCAGTCCATACAGGCGTTATCCCGTTCTG 41369
||| | || || || || ||||| || | ||||| ||| ||| || || |
Sbjct 18275 CGCCTTAGGCAGCCCCATTCGCGGCGGTGAGGCCTTTCATACCGGCTGTATTCCTTTTTA 18216
Query 41370 GAAACACATTCAGACGGCGGTTAAATCTTGTTCCCAGGGTGGCGTTCGTGGTGGTGCAGC 41429
||||| | || || || || ||||| || ||||| || || || || || || || ||
Sbjct 18215 CAAACATTTCCAAACAGCCGTCAAATCGTGCTCCCAAGGCGGTGTGCGCGGGGGAGCCGC 18156
Query 41430 AACCCTGTATTATCCGATCTGGCATCTTGAAGTTGAAAACCTGCTGGTTCTGAAAAATAA 41489
||||| | |||||| | ||||||| ||||| ||| |||| | || | ||||| ||
Sbjct 18155 TACCCTCTTCTATCCGCTATGGCATCGCGAAGTAGAAGCCCTGTTAGTGTTAAAAAACAA 18096
Query 41490 CCGTGGCGTTGAAGAAAACCGTATTCGTCACCTGGACTATGGCGTACAGCTTAAC 41544
|| |||||||| ||||| || | || || ||||| ||||| |||||||| |||
Sbjct 18095 TCGGGGCGTTGAGGAAAATCGGGTACGCCATCTGGATTATGGGGTACAGCTGAAC 18041
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565383785984160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |