Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_014662.1
Length=165540
Score E
Sequences producing significant alignments: (Bits) Value
seq7918 131 2e-25
>seq7918
Length=32631
Score = 131 bits (144), Expect = 2e-25
Identities = 279/417 (67%), Gaps = 0/417 (0%)
Strand=Plus/Plus
Query 137894 CAGGTCGTTGATTTGAACACCATAATCCAAGTGACGAATTCGGTTTTCATCTACGCCTTT 137953
||| | ||| | || || |||||||||| || || | || ||||| || |||||
Sbjct 18035 CAGTTTGTTCAGCTGTACCCCATAATCCAGATGGCGTACCCGATTTTCCTCAACGCCCCG 18094
Query 137954 GTTGTTCTTAAGTACGAGGAGGTTCTCAACTTCAAGGTGCCAGATTGGATAGTACAATGT 138013
||||| || | || | ||| || ||||| | ||||| | |||||| | | ||
Sbjct 18095 ATTGTTTTTTAACACTAACAGGGCTTCTACTTCGCGATGCCATAGCGGATAGAAGAGGGT 18154
Query 138014 CGCCGCGCCACCACGGACTCCGCCTTGGGAACAAGACTTAACTGCTGTTTGGATGTGTTT 138073
|| || || || || || ||||||||||| || || || || |||||||||| |||||
Sbjct 18155 AGCGGCTCCCCCGCGCACACCGCCTTGGGAGCACGATTTGACGGCTGTTTGGAAATGTTT 18214
Query 138074 CCAGAAAGGAATAACTCCAGTATGCTTGACTTCTCCGAAGCCGATTTTTGAACCTTCTGC 138133
| ||||||||| || ||||| | | || ||| || || ||| ||
Sbjct 18215 GTAAAAAGGAATACAGCCGGTATGAAAGGCCTCACCGCCGCGAATGGGGCTGCCTAAGGC 18274
Query 138134 ACGAATCATACCTGCGTTAATGCCGATACCAGCACGTTTAGAGATGTACTCTACAATTGA 138193
|| ||| | || || ||||| || ||||| ||||||| ||||| ||| | ||||| |
Sbjct 18275 GCGGATCTTGCCGGCATTAATCCCAATACCGGCACGTTGAGAGACGTATTTCACAATGGC 18334
Query 138194 TTCAGCTGATTTGTTAATTGACTTCAGTGAATCACCAGCTTCAATAACAACGCAAGAACT 138253
|| | || || || | | ||| || || || | || ||||| ||
Sbjct 18335 ACTGGCGGTGGCATTGATGGAGTCTAAACTATCTGCACACTCGATTAACACACAAGAGCT 18394
Query 138254 GAATTGACGAGTAGGAGTACGAGCACCTGCCATGATTGGAGTTGGCAGAGAAATTTT 138310
|||||||| || || |||||| |||| ||||| || ||||| ||||| ||||||||
Sbjct 18395 AAATTGACGGGTTGGGGTACGAACACCCGCCATAATCGGAGTAGGCAGCGAAATTTT 18451
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 529403538260000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |