Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq10252 84.2 3e-11
>seq10252
Length=19166
Score = 84.2 bits (92), Expect = 3e-11
Identities = 114/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 168429 CTTACCACGGAGTGGAAATACCCCATAATGATCTCTACCCACGACGGAGAGACCAGCGAC 168488
||||||||| |||||||| || |||||| |||| | || || || | ||| |||
Sbjct 13510 CTTACCACGAAGTGGAAAGACTCCATAAAGATCACGTCCAACAACACCCAATCCACTGAC 13451
Query 168489 AGCGAGAGTTTTCGCTGAATCACCCTCTGTCACGATGAGTGTACACTTTCCAGACTGTGC 168548
||| | ||||| || ||||| ||||| |||| ||||||||||| || | || | |
Sbjct 13450 AGCTAATGTTTTAGCCGAATCTCCCTCAGTCAAAATGAGTGTACAATTAACCGAGTTTTT 13391
Query 168549 CGTACCAGCTTTGTTCGCATCGTCCAATTTGGGGATACC 168587
|| ||||| | ||| ||||| || | ||| || || ||
Sbjct 13390 AGTTCCAGCATCGTTTGCATCTTCTAGTTTTGGAATTCC 13352
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588757511990600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |