Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq10252 84.2 3e-11 >seq10252 Length=19166 Score = 84.2 bits (92), Expect = 3e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 168429 CTTACCACGGAGTGGAAATACCCCATAATGATCTCTACCCACGACGGAGAGACCAGCGAC 168488 ||||||||| |||||||| || |||||| |||| | || || || | ||| ||| Sbjct 13510 CTTACCACGAAGTGGAAAGACTCCATAAAGATCACGTCCAACAACACCCAATCCACTGAC 13451 Query 168489 AGCGAGAGTTTTCGCTGAATCACCCTCTGTCACGATGAGTGTACACTTTCCAGACTGTGC 168548 ||| | ||||| || ||||| ||||| |||| ||||||||||| || | || | | Sbjct 13450 AGCTAATGTTTTAGCCGAATCTCCCTCAGTCAAAATGAGTGTACAATTAACCGAGTTTTT 13391 Query 168549 CGTACCAGCTTTGTTCGCATCGTCCAATTTGGGGATACC 168587 || ||||| | ||| ||||| || | ||| || || || Sbjct 13390 AGTTCCAGCATCGTTTGCATCTTCTAGTTTTGGAATTCC 13352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588757511990600