Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_015250.1
Length=159801
Score E
Sequences producing significant alignments: (Bits) Value
seq7918 82.4 8e-11
>seq7918
Length=32631
Score = 82.4 bits (90), Expect = 8e-11
Identities = 108/150 (72%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 137445 AACCCCAATGCCCGCTCGTTTTGACACGTACGAAATAATAGCAGATGATGTTTCATTAAT 137504
|| |||||| || || |||| || ||||| | ||| ||| | || |||| ||
Sbjct 18293 AATCCCAATACCGGCACGTTGAGAGACGTATTTCACAATGGCACTGGCGGTGGCATTGAT 18352
Query 137505 CGAGTCCAAGCTATCACCAGATTCAATCAGTACACAAGAACTAAATTGACGTGTTGGTGT 137564
||||| || ||||| || | || || | |||||||| ||||||||||| ||||| ||
Sbjct 18353 GGAGTCTAAACTATCTGCACACTCGATTAACACACAAGAGCTAAATTGACGGGTTGGGGT 18412
Query 137565 ACGTACTCCGGCCATGATTGGAGTGGGTAG 137594
||| || || ||||| || ||||| || ||
Sbjct 18413 ACGAACACCCGCCATAATCGGAGTAGGCAG 18442
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511045550912120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |