Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_015250.1 Length=159801 Score E Sequences producing significant alignments: (Bits) Value seq7918 82.4 8e-11 >seq7918 Length=32631 Score = 82.4 bits (90), Expect = 8e-11 Identities = 108/150 (72%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 137445 AACCCCAATGCCCGCTCGTTTTGACACGTACGAAATAATAGCAGATGATGTTTCATTAAT 137504 || |||||| || || |||| || ||||| | ||| ||| | || |||| || Sbjct 18293 AATCCCAATACCGGCACGTTGAGAGACGTATTTCACAATGGCACTGGCGGTGGCATTGAT 18352 Query 137505 CGAGTCCAAGCTATCACCAGATTCAATCAGTACACAAGAACTAAATTGACGTGTTGGTGT 137564 ||||| || ||||| || | || || | |||||||| ||||||||||| ||||| || Sbjct 18353 GGAGTCTAAACTATCTGCACACTCGATTAACACACAAGAGCTAAATTGACGGGTTGGGGT 18412 Query 137565 ACGTACTCCGGCCATGATTGGAGTGGGTAG 137594 ||| || || ||||| || ||||| || || Sbjct 18413 ACGAACACCCGCCATAATCGGAGTAGGCAG 18442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511045550912120